FFCP PHASE1:Hg19::chr5:79375654..79375674,+: Difference between revisions
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|id=chr5:79375654..79375674,+
|short_description=p@chr5:79375654..79375674,+
|description=CAGE_peak_at_chr5:79375654..79375674,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:79375654..79375674,+ | |||
|coexpression_cluster_id=C155 | |||
|description=CAGE_peak_at_chr5:79375654..79375674,+ | |||
|id=chr5:79375654..79375674,+ | |||
|ontology_enrichment_celltype=CL:0002363!7.14e-26!2;CL:0000008!7.14e-26!2 | |||
|ontology_enrichment_celltype_v019=CL:0002363;7.05e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,7.05e-34,2;CL:0000008,7.05e-34,2 | |||
|ontology_enrichment_development_v019=CL:0000008;7.05e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!5.68e-99!2;UBERON:0003296!3.11e-50!4;UBERON:0010133!3.11e-50!4;UBERON:0001882!6.58e-50!1;UBERON:0005403!6.58e-50!1;UBERON:0001894!2.74e-29!7;UBERON:0006222!2.74e-29!7;UBERON:0003566!7.14e-26!2;UBERON:0001777!7.14e-26!2;UBERON:0000964!1.13e-13!4;UBERON:0004348!1.13e-13!4;UBERON:0005427!1.13e-13!4;UBERON:0000369!1.29e-13!4;UBERON:0002435!1.29e-13!4;UBERON:0000204!1.29e-13!4;UBERON:0010082!1.29e-13!4;UBERON:0003056!1.29e-13!61;UBERON:0002780!1.61e-11!41;UBERON:0001890!1.61e-11!41;UBERON:0006240!1.61e-11!41;UBERON:0003080!2.84e-11!42;UBERON:0003891!3.26e-11!5;UBERON:0000349!3.60e-11!5;UBERON:0003075!5.98e-10!86;UBERON:0007284!5.98e-10!86;UBERON:0002346!1.51e-09!90;UBERON:0001049!1.39e-08!57;UBERON:0005068!1.39e-08!57;UBERON:0006241!1.39e-08!57;UBERON:0007135!1.39e-08!57;UBERON:0009663!2.35e-08!7;UBERON:0002616!2.51e-08!59;UBERON:0000955!3.66e-07!69;UBERON:0006238!3.66e-07!69;UBERON:0000033!3.69e-07!123;UBERON:0000153!7.27e-07!129;UBERON:0007811!7.27e-07!129;UBERON:0002308!8.85e-07!9;UBERON:0002420!8.85e-07!9;UBERON:0000125!8.85e-07!9;UBERON:0007245!8.85e-07!9;UBERON:0010009!8.85e-07!9;UBERON:0010011!8.85e-07!9;UBERON:0000454!8.85e-07!9;UBERON:0002368!9.98e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0003566;7.05e-34;2!UBERON:0001777;7.05e-34;2!UBERON:0003891;1.03e-17;4!UBERON:0000964;1.03e-17;4!UBERON:0010409;1.03e-17;4!UBERON:0002368;1.21e-08;33!UBERON:0010313;6.56e-08;10!UBERON:0002780;4.33e-07;41!UBERON:0001890;4.33e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0003566,7.05e-34,2;UBERON:0001777,7.05e-34,2;UBERON:0003891,1.03e-17,4;UBERON:0000964,1.03e-17,4;UBERON:0010409,1.03e-17,4;UBERON:0004348,1.03e-17,4;UBERON:0005427,1.03e-17,4;UBERON:0003056,1.22e-10,61;UBERON:0002368,1.09e-08,35;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0002346,7.10e-08,86;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p@chr5:79375654..79375674,+ | |||
}} | }} |
Latest revision as of 16:45, 30 July 2015
Short description: | p@chr5:79375654..79375674, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:79375654..79375674, + |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 7.05e-34 | 2 |
migratory cranial neural crest cell | 7.05e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
head connective tissue | 7.05e-34 | 2 |
substantia propria of cornea | 7.05e-34 | 2 |
stroma | 1.03e-17 | 4 |
cornea | 1.03e-17 | 4 |
eye surface | 1.03e-17 | 4 |
optic eminence | 1.03e-17 | 4 |
corneal primordium | 1.03e-17 | 4 |
pre-chordal neural plate | 1.22e-10 | 61 |
endocrine gland | 1.09e-08 | 35 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
neurectoderm | 7.10e-08 | 86 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |