FFCP PHASE1:Hg19::chr5:79375755..79375801,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:79375755..79375801,+ to FFCP PHASE1:Hg19::chr5:79375755..79375801,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:79375755..79375801,+ | |||
|coexpression_cluster_id=C155 | |||
|description=CAGE_peak_at_chr5:79375755..79375801,+ | |||
|id=chr5:79375755..79375801,+ | |||
|ontology_enrichment_celltype=CL:0000135!1.19e-12!3;CL:0000386!1.19e-12!3;CL:0000388!1.19e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.75e-74;3!CL:0000388;2.75e-74;3!CL:0000499;1.17e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.75e-74,3;CL:0000388,2.75e-74,3;CL:0000499,1.17e-08,28 | |||
|ontology_enrichment_development_v019=UBERON:0004874;6.72e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.84e-22!115;UBERON:0000043!1.19e-12!3;UBERON:0003296!1.61e-09!4;UBERON:0010133!1.61e-09!4;UBERON:0001894!4.95e-09!7;UBERON:0006222!4.95e-09!7;UBERON:0000007!5.85e-09!2;UBERON:0002346!2.91e-08!90;UBERON:0002780!4.50e-08!41;UBERON:0001890!4.50e-08!41;UBERON:0006240!4.50e-08!41;UBERON:0003080!7.78e-08!42;UBERON:0003075!9.59e-08!86;UBERON:0007284!9.59e-08!86;UBERON:0005743!1.27e-07!86;UBERON:0001049!1.65e-07!57;UBERON:0005068!1.65e-07!57;UBERON:0006241!1.65e-07!57;UBERON:0007135!1.65e-07!57;UBERON:0002616!3.59e-07!59;UBERON:0001017!3.90e-07!82;UBERON:0000349!7.07e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.75e-74;3!UBERON:0000043;2.75e-74;3!UBERON:0007845;2.75e-74;3!UBERON:0000989;6.72e-26;1!UBERON:0008811;6.72e-26;1!UBERON:0003296;8.13e-26;4!UBERON:0010133;8.13e-26;4!UBERON:0001894;3.17e-15;7!UBERON:0000007;6.43e-14;2!UBERON:0001905;1.14e-13;2!UBERON:0002757;1.14e-13;2!UBERON:0010134;1.14e-13;2!UBERON:0005408;1.14e-13;2!UBERON:0001899;1.14e-13;2!UBERON:0001723;1.47e-09;3!UBERON:0001033;1.47e-09;3!UBERON:0002784;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.75e-74,3;UBERON:0000043,2.75e-74,3;UBERON:0007845,2.75e-74,3;UBERON:0000989,3.58e-26,1;UBERON:0008811,3.58e-26,1;UBERON:0006258,3.58e-26,1;UBERON:0005876,3.58e-26,1;UBERON:0004874,3.58e-26,1;UBERON:0003296,9.82e-26,4;UBERON:0010133,9.82e-26,4;UBERON:0001894,3.53e-15,7;UBERON:0006222,3.53e-15,7;UBERON:0000007,6.43e-14,2;UBERON:0001905,1.37e-13,2;UBERON:0002757,1.37e-13,2;UBERON:0010134,1.37e-13,2;UBERON:0005408,1.37e-13,2;UBERON:0001899,1.37e-13,2;UBERON:0001723,1.81e-09,3;UBERON:0001033,1.81e-09,3;UBERON:0010056,1.81e-09,3;UBERON:0002784,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.858452096273142,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,1.07140367175657,0,30.9552458160682,0.91064876540519,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69591032700152,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.606351566874658,0.435433495793923,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0.858452096273142,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,1.07140367175657,0,30.9552458160682,0.91064876540519,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69591032700152,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.606351566874658,0.435433495793923,1.02669990325584,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr5:79375755..79375801,+ | |||
}} | }} |
Latest revision as of 16:45, 30 July 2015
Short description: | p@chr5:79375755..79375801, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:79375755..79375801, + |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.75e-74 | 3 |
tendon cell | 2.75e-74 | 3 |
stromal cell | 1.17e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.75e-74 | 3 |
tendon | 2.75e-74 | 3 |
regular connective tissue | 2.75e-74 | 3 |
penis | 3.58e-26 | 1 |
intromittent organ | 3.58e-26 | 1 |
lateral plate mesenchyme | 3.58e-26 | 1 |
undifferentiated genital tubercle | 3.58e-26 | 1 |
somatopleure | 3.58e-26 | 1 |
gland of diencephalon | 9.82e-26 | 4 |
neuroendocrine gland | 9.82e-26 | 4 |
diencephalon | 3.53e-15 | 7 |
future diencephalon | 3.53e-15 | 7 |
pituitary gland | 6.43e-14 | 2 |
pineal body | 1.37e-13 | 2 |
regional part of epithalamus | 1.37e-13 | 2 |
secretory circumventricular organ | 1.37e-13 | 2 |
circumventricular organ | 1.37e-13 | 2 |
epithalamus | 1.37e-13 | 2 |
tongue | 1.81e-09 | 3 |
gustatory system | 1.81e-09 | 3 |
future tongue | 1.81e-09 | 3 |
regional part of diencephalon | 1.92e-07 | 4 |