FFCP PHASE1:Hg19::chr6:135533394..135533403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:135533394..135533403,+ | |||
|coexpression_cluster_id=C1970 | |||
|description=CAGE_peak_at_chr6:135533394..135533403,+ | |description=CAGE_peak_at_chr6:135533394..135533403,+ | ||
|id=chr6:135533394..135533403,+ | |id=chr6:135533394..135533403,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.20e-20!172;CL:0000566!3.20e-20!172;CL:0000988!3.97e-20!182;CL:0002032!6.14e-17!165;CL:0000837!6.14e-17!165;CL:0000763!1.69e-09!112;CL:0000049!1.69e-09!112;CL:0000542!5.45e-08!53;CL:0000051!5.45e-08!53;CL:0000838!1.89e-07!52;CL:0000084!8.44e-07!25;CL:0000827!8.44e-07!25 | |ontology_enrichment_celltype=CL:0000037!3.20e-20!172;CL:0000566!3.20e-20!172;CL:0000988!3.97e-20!182;CL:0002032!6.14e-17!165;CL:0000837!6.14e-17!165;CL:0000763!1.69e-09!112;CL:0000049!1.69e-09!112;CL:0000542!5.45e-08!53;CL:0000051!5.45e-08!53;CL:0000838!1.89e-07!52;CL:0000084!8.44e-07!25;CL:0000827!8.44e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000763;3.77e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.45e-33,177;CL:0000037,2.20e-31,168;CL:0002032,6.10e-29,161;CL:0000837,6.10e-29,161;CL:0000763,8.25e-23,108;CL:0000049,8.25e-23,108;CL:0000134,1.56e-08,354;CL:0002320,4.17e-08,361;CL:0000219,4.31e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;2.26e-07;108 | |||
|ontology_enrichment_disease=DOID:2531!1.36e-43!51;DOID:0060083!1.36e-43!51;DOID:1240!1.56e-38!39;DOID:8692!1.21e-31!31;DOID:0050686!2.22e-18!137;DOID:162!1.94e-10!235;DOID:14566!5.07e-10!239;DOID:1036!4.31e-09!8;DOID:0060058!5.01e-09!10 | |ontology_enrichment_disease=DOID:2531!1.36e-43!51;DOID:0060083!1.36e-43!51;DOID:1240!1.56e-38!39;DOID:8692!1.21e-31!31;DOID:0050686!2.22e-18!137;DOID:162!1.94e-10!235;DOID:14566!5.07e-10!239;DOID:1036!4.31e-09!8;DOID:0060058!5.01e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.47e-69;31!DOID:1240;2.82e-66;39!DOID:2531;1.52e-49;51!DOID:0060083;1.52e-49;51!DOID:1036;4.28e-19;8!DOID:0050686;2.81e-09;137!DOID:0060058;5.28e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.62e-85,39;DOID:2531,4.40e-85,51;DOID:0060083,4.40e-85,51;DOID:8692,4.95e-72,31;DOID:0050686,8.35e-32,137;DOID:1036,4.30e-19,8;DOID:162,1.37e-14,235;DOID:14566,5.19e-14,239;DOID:0060058,6.32e-08,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.55e-07;15!UBERON:0000179;9.55e-07;15!UBERON:0000463;9.55e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.57e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.273748850145768,0,0.916960868975415,0.903106483949403,1.41679406364623,0,0,0.309632246632152,0,0,0,0.852139206383318,1.27952309238679,1.46800219667424,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,8.16490662802739,0,0,0.411202997999018,0.167186495390678,0,0.473447805734733,3.89653456815823,1.00269411196656,0.294605907474837,0.221533894583621,0,0.896639238079726,0.780356085359269,0.657751618414705,0.552700035571697,0.289803085735052,0.296573126324121,1.07016331235885,0,0.113309342697566,0,0,0,0.318565414324097,1.95325036156926,0,0.150575119077773,0.511946444617674,0,0.473554504088034,0,0.201606743224732,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0,0,4.29283123749616,0.571994910780128,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,10.153651286537,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.179117045405697,0,0,0.492663237895943,5.81119664487292,1.65862492432618,2.73827911492227,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97333888981341,1.8300481571743,0,0,0,0,0,0.742585499285292,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0.658589785919804,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.13929437434833,0.952927101831156,0,1.29694662238543,1.08006287447623,0,0,0,0,2.60124445176006,3.17392268548179,9.74643253873273,5.7393458182376,3.79200805722352,4.0216127727797,8.6786168916792,10.7125240290603,16.0054391524672,11.868203309726,7.99067468442419,20.0507581672054,1.35433422241283,16.5405717356811,19.5745715975316,13.6270796060904,4.80907482658071,9.21722292925374,6.48660712888006,3.67068111766199,8.01091191148365,2.22724939116194,2.46174797895425,2.70455678475983,8.65987116794332,5.63948020351398,0.18714054040822,0,0,3.12041475976939,0,0,0.296964680832639,0,0,0.140669416410513,0,5.76813559793659,0,0,0.276283915531148,0,0.102268682502155,1.10776324914963,0,0.0898683511473268,0.179021174675609,28.1364803624779,0,0,0,0,0,0,1.30213880542617,2.44887999989348,0,0.1137934482855,0,0.236387681767936,1.72371686620732,2.04123229368278,0.173624994933292,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15353087370155,12.558420511602,12.6320878244119,2.25595660617181,2.15668787749514,2.85296697858933,3.03605972358696,19.8670723725473,0.210998064528027,0,0,0.216388639742091,0.995261931078505,0.265372693510018,1.83309043480088,9.4886761177799,9.02016754309471,9.60681935450189,0,0,0,2.18945747058799,0.19566461893209,0,0,2.41981432097328,0.30607276163049,0,0.300646838828985,0.311064574191741,0,0,0,0,0,0,0.173559738335131,0,0,0,0.859930162358083,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0,0,0,0,0,0,0,0,0,6.57218385698286,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0.136203406111576,0,0,0.415440338029185,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,6.64949418069646,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0.395223263795889,0.487170393523584,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.415045904808692,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0,1.19992437512958,17.7108271292274,2.06657975592979,0,0,0,0,0,0.431299245586727,0.157265941855896,0,0.848662649770126,1.48802444071178,0.123935764259002,0,0,9.06910067514413,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18789923607288,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0.078493092850514,0.628462359664008,0,0,0,0,0.0714765441766563,0.94808167039636,0,0,0,0,0,0,0,0,0.0852134047591577,0,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|short_description=p@chr6:135533394..135533403,+ | |short_description=p@chr6:135533394..135533403,+ | ||
}} | }} |
Latest revision as of 19:47, 30 July 2015
Short description: | p@chr6:135533394..135533403, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:135533394..135533403, + |
Coexpression cluster: | C1970_biphenotypic_acute_non_chronic_myelodysplastic_cord_Hodgkin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.45e-33 | 177 |
hematopoietic stem cell | 2.20e-31 | 168 |
hematopoietic oligopotent progenitor cell | 6.10e-29 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-29 | 161 |
myeloid cell | 8.25e-23 | 108 |
common myeloid progenitor | 8.25e-23 | 108 |
mesenchymal cell | 1.56e-08 | 354 |
connective tissue cell | 4.17e-08 | 361 |
motile cell | 4.31e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.57e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.62e-85 | 39 |
hematologic cancer | 4.40e-85 | 51 |
immune system cancer | 4.40e-85 | 51 |
myeloid leukemia | 4.95e-72 | 31 |
organ system cancer | 8.35e-32 | 137 |
chronic leukemia | 4.30e-19 | 8 |
cancer | 1.37e-14 | 235 |
disease of cellular proliferation | 5.19e-14 | 239 |
lymphoma | 6.32e-08 | 10 |