FFCP PHASE1:Hg19::chr6:2889928..2889934,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:2889928..2889934,-
|short_description=p@chr6:2889928..2889934,-
|description=CAGE_peak_at_chr6:2889928..2889934,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:2889928..2889934,- | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_at_chr6:2889928..2889934,- | |||
|id=chr6:2889928..2889934,- | |||
|ontology_enrichment_celltype=CL:0002057!3.64e-25!42;CL:0000860!2.32e-22!45;CL:0000557!2.27e-17!71;CL:0002031!2.63e-17!124;CL:0000738!2.75e-17!140;CL:0002087!5.30e-17!119;CL:0000839!9.34e-17!70;CL:0002009!2.27e-16!65;CL:0002194!2.88e-16!63;CL:0000576!2.88e-16!63;CL:0000040!2.88e-16!63;CL:0000559!2.88e-16!63;CL:0000766!1.05e-14!76;CL:0000037!2.11e-12!172;CL:0000566!2.11e-12!172;CL:0002032!6.81e-12!165;CL:0000837!6.81e-12!165;CL:0000988!7.16e-12!182;CL:0000763!2.68e-09!112;CL:0000049!2.68e-09!112;CL:0002139!1.77e-07!24;CL:0000115!2.84e-07!35;CL:0000039!8.87e-07!7;CL:0000586!8.87e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.64e-56;33!CL:0002057;4.64e-56;33!CL:0000473;3.36e-42;39!CL:0000234;3.36e-42;39!CL:0000576;6.04e-29;48!CL:0000766;9.61e-17;69!CL:0002087;9.45e-10;104!CL:0000763;1.43e-08;100!CL:0002138;1.76e-07;6!CL:0000738;6.12e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.33e-54,42;CL:0002057,3.33e-54,42;CL:0000473,1.45e-49,48;CL:0000234,1.45e-49,48;CL:0002009,5.77e-39,61;CL:0002194,6.36e-38,59;CL:0000576,6.36e-38,59;CL:0000040,6.36e-38,59;CL:0000559,6.36e-38,59;CL:0000557,1.74e-37,67;CL:0000839,9.41e-36,66;CL:0000766,4.33e-32,72;CL:0002031,2.60e-24,120;CL:0002087,1.59e-22,115;CL:0000763,1.25e-21,108;CL:0000049,1.25e-21,108;CL:0000738,2.57e-20,136;CL:0002032,7.24e-17,161;CL:0000837,7.24e-17,161;CL:0000037,9.25e-16,168;CL:0000988,1.80e-14,177;CL:0005020,3.07e-07,6;CL:0002138,3.07e-07,6;CL:0005022,3.07e-07,6;CL:0000039,6.76e-07,7;CL:0000586,6.76e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002057;9.52e-41;42!CL:0000049;6.93e-08;108!CL:0005022;1.76e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.41e-21!115;UBERON:0002193!1.76e-19!112;UBERON:0002390!4.38e-16!102;UBERON:0003061!4.38e-16!102;UBERON:0002371!3.62e-14!80;UBERON:0003081!5.63e-13!216;UBERON:0001474!5.58e-12!86;UBERON:0004765!3.88e-09!101;UBERON:0001434!3.88e-09!101;UBERON:0000926!8.58e-07!448;UBERON:0004120!8.58e-07!448;UBERON:0006603!8.58e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,6.49e-34,93;UBERON:0002371,4.79e-32,76;UBERON:0002193,1.17e-31,108;UBERON:0001474,4.43e-29,82;UBERON:0002390,2.62e-28,98;UBERON:0003061,2.62e-28,98;UBERON:0004765,9.70e-26,90;UBERON:0001434,2.57e-22,100;UBERON:0003081,4.64e-15,203;UBERON:0002204,6.25e-11,167;UBERON:0000926,6.57e-08,315;UBERON:0004120,6.57e-08,315;UBERON:0006603,6.57e-08,315 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,1.52826811495903,1.14940825229924,0.787107813136792,0,0,0.154816123316076,0,0,0,0.46480320348181,0,0.293600439334847,0.553995408531877,1.20326668482085,0.868043482863407,0.447830948479849,0,0,1.59938062657521,0,1.4555043671269,4.41615170120801,2.46700732813095,2.78735733805593,2.3015391385772,4.86705342405291,0.47296445977717,4.82643953031266,3.87290810150296,2.70852973188684,3.9530891303947,3.0019676506363,2.24723484445085,11.6311879100943,3.85114832491312,6.39337125799041,1.9791078011203,2.19410023383795,2.98357325372886,6.96502172708602,7.37600792098482,6.85104473895132,0.75374599577023,2.08593167368081,1.52032191293582,4.23779651843358,3.68277635987565,2.84816148696796,0,0.212604299965044,1.04829322754188,0.112328631146495,0.450530678524519,0,0,0.19891667719909,0,0,1.09227722252426,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0.473554504088034,1.64225599384209,0,0.267440195783507,0.434473211648397,0,1.34140171940727,0.639312809217652,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0.39752481473341,0,1.38856200643038,0,1.25849830862972,1.6507082516404,0.417989933073621,1.03366703667732,1.06729878806013,0,0.402829317109147,0,0.976248230192678,1.47065232138347,0.81014194788176,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.732806975721629,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.622422070799533,0.404132016209064,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0.150238058906597,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.609868530647977,0.662648841607426,1.04574548582567,1.55491582523056,3.78481276313443,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,1.47008711385542,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.117408694235822,1.01056513432752,0.462985512576611,1.71228737011138,0,0,0.246217006087397,0,0.445893486866185,0,0,0.141775097242386,0,0,0,13.3019074231905,0.352193736052904,0.207328115540772,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,1.00084595560703,0.542621605391443,0,0,1.77695974371273,0,0,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0,0,0.448340575974109,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0.120859449591622,0,0,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0.422206515571503,2.27466768141793,0.850468526382578,0.431831832204279,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0.731140468893853,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,2.37937552888281,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.497992903438899,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0.293016358543788,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,2.33861130376032,0,0.359473404589307,0,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.591095237907095,0,0,0,0,0.113942055847001,1.84451123510448,0.448788222048861,0.760531603454056,0,0.824378340616761,1.5991043280559,0,0,0,0,0.19606253431774,0.335643173951685,0,0.158936578980379,0,0,0,0,0,0,1.22206028986725,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.320635281006135,0,0,0,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0.236349546921671,0.164831716762333,0.337017719270924,0.0984274815147488,0,0,0.136203406111576,2.89355667237035,0,0,1.1248694577575,0,0.121499113316049,0,0,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0,0.26446520348538,0,0,0.320362237703084,0,0,0,0,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1512309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| ||
|short_description=p@chr6:2889928..2889934,- | |||
}} | }} |
Latest revision as of 23:18, 30 July 2015
Short description: | p@chr6:2889928..2889934, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:2889928..2889934, - |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.33e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-54 | 42 |
defensive cell | 1.45e-49 | 48 |
phagocyte | 1.45e-49 | 48 |
macrophage dendritic cell progenitor | 5.77e-39 | 61 |
monopoietic cell | 6.36e-38 | 59 |
monocyte | 6.36e-38 | 59 |
monoblast | 6.36e-38 | 59 |
promonocyte | 6.36e-38 | 59 |
granulocyte monocyte progenitor cell | 1.74e-37 | 67 |
myeloid lineage restricted progenitor cell | 9.41e-36 | 66 |
myeloid leukocyte | 4.33e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 2.60e-24 | 120 |
nongranular leukocyte | 1.59e-22 | 115 |
myeloid cell | 1.25e-21 | 108 |
common myeloid progenitor | 1.25e-21 | 108 |
leukocyte | 2.57e-20 | 136 |
hematopoietic oligopotent progenitor cell | 7.24e-17 | 161 |
hematopoietic multipotent progenitor cell | 7.24e-17 | 161 |
hematopoietic stem cell | 9.25e-16 | 168 |
hematopoietic cell | 1.80e-14 | 177 |
lymphangioblast | 3.07e-07 | 6 |
endothelial cell of lymphatic vessel | 3.07e-07 | 6 |
vascular lymphangioblast | 3.07e-07 | 6 |
germ line cell | 6.76e-07 | 7 |
germ cell | 6.76e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
immune system | 6.49e-34 | 93 |
bone marrow | 4.79e-32 | 76 |
hemolymphoid system | 1.17e-31 | 108 |
bone element | 4.43e-29 | 82 |
hematopoietic system | 2.62e-28 | 98 |
blood island | 2.62e-28 | 98 |
skeletal element | 9.70e-26 | 90 |
skeletal system | 2.57e-22 | 100 |
lateral plate mesoderm | 4.64e-15 | 203 |
musculoskeletal system | 6.25e-11 | 167 |
mesoderm | 6.57e-08 | 315 |
mesoderm-derived structure | 6.57e-08 | 315 |
presumptive mesoderm | 6.57e-08 | 315 |