FFCP PHASE1:Hg19::chr6:30883579..30883597,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:30883579..30883597,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr6:30883579..30883597,+ | |description=CAGE_peak_at_chr6:30883579..30883597,+ | ||
|id=chr6:30883579..30883597,+ | |id=chr6:30883579..30883597,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;5.69e-21;2!CL:1000500;5.69e-21;2!CL:1000618;5.69e-21;2!CL:1001318;5.69e-21;2!CL:0002173;5.69e-21;2!CL:1000507;8.81e-17;10!CL:1000494;8.81e-17;10!CL:0000746;1.40e-14;3!CL:0000239;1.83e-14;3!CL:1000615;1.83e-14;3!CL:0002306;1.83e-14;3!CL:0002681;3.59e-14;12!CL:0002584;3.59e-14;12!CL:1000449;1.49e-11;15!CL:0000737;2.80e-11;4!CL:0000669;3.42e-11;4!CL:1000497;2.58e-10;17!CL:0002518;2.58e-10;17!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,6.96e-21,2;CL:1000500,6.96e-21,2;CL:1000618,6.96e-21,2;CL:1001318,6.96e-21,2;CL:0002173,6.96e-21,2;CL:1000507,9.54e-17,10;CL:1000494,9.54e-17,10;CL:0000746,1.40e-14,3;CL:0000513,1.40e-14,3;CL:0000239,1.83e-14,3;CL:1000615,1.83e-14,3;CL:0002306,1.83e-14,3;CL:0002681,3.84e-14,12;CL:0002584,3.84e-14,12;CL:1000449,1.58e-11,15;CL:0000737,2.80e-11,4;CL:0000669,3.79e-11,4;CL:1000497,2.70e-10,17;CL:0002518,2.70e-10,17;CL:1000746,6.39e-07,7;CL:1000612,6.39e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000513;1.40e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003567;5.69e-21;2!UBERON:0003838;5.69e-21;2!UBERON:0003586;5.69e-21;2!UBERON:0005169;5.69e-21;2!UBERON:0002321;5.69e-21;2!UBERON:0005215;5.69e-21;2!UBERON:0002303;5.69e-21;2!UBERON:0002319;5.69e-21;2!UBERON:0004211;8.81e-17;10!UBERON:0009773;8.81e-17;10!UBERON:0001231;8.81e-17;10!UBERON:0004810;8.81e-17;10!UBERON:0006853;1.83e-14;3!UBERON:0007685;1.83e-14;3!UBERON:0004134;1.83e-14;3!UBERON:0001225;3.59e-14;12!UBERON:0008987;3.59e-14;12!UBERON:0001851;1.49e-11;15!UBERON:0006555;1.49e-11;15!UBERON:0000353;1.49e-11;15!UBERON:0004819;1.49e-11;15!UBERON:0001285;1.49e-11;15!UBERON:0007684;1.49e-11;15!UBERON:0003891;3.42e-11;4!UBERON:0002113;1.36e-07;24!UBERON:0011143;1.36e-07;24!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
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| ||
|short_description=p@chr6:30883579..30883597,+ | |short_description=p@chr6:30883579..30883597,+ | ||
}} | }} |
Latest revision as of 23:46, 30 July 2015
Short description: | p@chr6:30883579..30883597, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:30883579..30883597, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 6.96e-21 | 2 |
kidney interstitial cell | 6.96e-21 | 2 |
juxtaglomerular complex cell | 6.96e-21 | 2 |
renal interstitial pericyte | 6.96e-21 | 2 |
extraglomerular mesangial cell | 6.96e-21 | 2 |
kidney tubule cell | 9.54e-17 | 10 |
nephron tubule epithelial cell | 9.54e-17 | 10 |
cardiac muscle cell | 1.40e-14 | 3 |
cardiac muscle myoblast | 1.40e-14 | 3 |
brush border epithelial cell | 1.83e-14 | 3 |
kidney cortex tubule cell | 1.83e-14 | 3 |
epithelial cell of proximal tubule | 1.83e-14 | 3 |
kidney cortical cell | 3.84e-14 | 12 |
renal cortical epithelial cell | 3.84e-14 | 12 |
epithelial cell of nephron | 1.58e-11 | 15 |
striated muscle cell | 2.80e-11 | 4 |
pericyte cell | 3.79e-11 | 4 |
kidney cell | 2.70e-10 | 17 |
kidney epithelial cell | 2.70e-10 | 17 |
glomerular cell | 6.39e-07 | 7 |
kidney corpuscule cell | 6.39e-07 | 7 |