FFCP PHASE1:Hg19::chr7:2983379..2983381,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:2983379..2983381,- | |||
|coexpression_cluster_id=C996 | |||
|description=CAGE_peak_at_chr7:2983379..2983381,- | |||
|id=chr7:2983379..2983381,- | |||
|ontology_enrichment_celltype=CL:0000542!5.88e-31!53;CL:0000051!5.88e-31!53;CL:0000838!3.20e-30!52;CL:0002087!1.01e-17!119;CL:0000945!5.79e-16!24;CL:0000826!5.79e-16!24;CL:0000738!1.72e-15!140;CL:0000791!7.21e-15!18;CL:0000789!7.21e-15!18;CL:0002420!7.21e-15!18;CL:0002419!7.21e-15!18;CL:0000790!7.21e-15!18;CL:0000988!7.94e-13!182;CL:0002031!9.15e-13!124;CL:0000037!1.20e-12!172;CL:0000566!1.20e-12!172;CL:0000084!1.72e-12!25;CL:0000827!1.72e-12!25;CL:0000236!1.86e-11!14;CL:0002032!9.49e-11!165;CL:0000837!9.49e-11!165;CL:0000625!8.09e-09!11;CL:0000624!5.94e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.10e-25;18!CL:0000789;4.10e-25;18!CL:0002419;4.10e-25;18!CL:0000542;2.79e-20;53!CL:0000084;4.28e-17;25!CL:0000945;2.39e-15;24!CL:0000236;5.38e-15;13!CL:0000625;4.77e-14;11!CL:0000624;9.32e-11;6!CL:0000623;1.04e-09;3!CL:0000226;2.84e-09;3!CL:0000842;2.84e-09;3!CL:0002087;1.72e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.16e-38,52;CL:0000542,6.87e-37,53;CL:0000051,6.87e-37,53;CL:0000791,2.94e-25,18;CL:0000789,2.94e-25,18;CL:0002420,2.94e-25,18;CL:0002419,2.94e-25,18;CL:0000790,2.94e-25,18;CL:0002087,2.43e-21,115;CL:0000738,4.26e-19,136;CL:0000084,3.40e-17,25;CL:0000827,3.40e-17,25;CL:0002031,5.47e-16,120;CL:0000945,2.09e-15,24;CL:0000826,2.09e-15,24;CL:0000037,1.70e-14,168;CL:0000625,3.86e-14,11;CL:0000236,4.53e-14,14;CL:0000988,2.98e-13,177;CL:0002032,1.77e-11,161;CL:0000837,1.77e-11,161;CL:0000624,5.30e-11,6;CL:0000623,9.00e-10,3;CL:0000825,9.00e-10,3;CL:0000226,2.68e-09,3;CL:0000842,2.68e-09,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.10e-25;18!CL:0000051;2.79e-20;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.48e-15!15;UBERON:0000179!6.48e-15!15;UBERON:0000463!6.48e-15!15;UBERON:0007023!7.13e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.64e-24;15!UBERON:0000179;1.64e-24;15!UBERON:0000463;1.64e-24;15!UBERON:0002390;4.05e-11;32!UBERON:0002193;4.34e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.47e-25,15;UBERON:0000179,6.47e-25,15;UBERON:0000463,6.47e-25,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.164201178899891,1.25937250101887,0.393364276848904,2.30297638858328,0.464448369948228,0,0,0,0.46480320348181,1.13735385989937,0,0.553995408531877,1.40381113229099,3.03815219002193,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0.736555271975129,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,1.28019066769952,1.60158394814405,0.574752439954483,1.32208974556972,1.90810750907073,7.96898156753228,1.76171156811282,4.58727873750275,0,2.24203425192614,0,1.37696839079683,8.25322601773246,1.85041349099558,1.17030546773475,0.977766799900771,1.4203434172042,5.84480185223734,1.00269411196656,1.47302953737419,1.55073726208535,2.16643091012012,1.40900451698243,4.03183977435623,2.13769275984779,3.31620021343018,0.289803085735052,1.63115219478266,1.87278579662799,2.09071047609954,1.58633079776593,1.53288197440768,2.06176467289578,1.26509846009751,1.91139248594458,1.30216690771284,1.90090408889675,1.05402583354441,0.511946444617674,0,1.18388626022008,1.64225599384209,0.403213486449465,5.08136371988664,4.05508330871837,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,1.43094374583205,2.28797964312051,0.371457501329565,0,0,0.694281003215189,0,0,0,0.835979866147242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0,0,1.00876629594175,2.56139988262505,8.84073056924021,8.47064039446339,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,2.80428461064202,3.52200940751366,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0.918893600827838,2.53723804616085,1.52927441428475,2.84823593587081,2.38231775457789,1.64544909234478,2.59389324477087,3.24018862342869,4.75875105776562,0,0,0.245040215981032,0.743212700502875,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,3.03912307084262,0,0,0.492339221844278,0,0.179736702294654,0.358042349351218,0,0.0986434056369336,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0.225595660617181,0.588187602953219,0.167821586975843,0.37950746544837,0,0,0,0,0,1.99052386215701,0.265372693510018,1.22206028986725,0.296521128680622,0.247127877893006,0.417687798021821,0.471807930864739,0.802577647298789,0.234264445725339,1.45963831372533,0.391329237864179,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0.977756913674015,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.523014231561666,0,0,0,0.547621515567972,0,0.859530882839914,0,0,0,2.15361907373044,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0,0.992332043623902,0.197611631897944,1.21792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.332787154610557,0.248385611765534,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0.963099152036517,0.214441591374926,0,0.453411851024545,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0.38582807654183,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0.245772908753719,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.806637912890455,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0.469919589899268,0.966868319603658,0.299823467774787,0,0,0.0802413666891683,0.730336388246517,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0,1.32585478664576,0.26721740526556,0.735159196278759,0.50141507858475,0.454672189309436,1.33982065078089,0,0.413731983447581,0,0,0.387533459016037,1.24149428591716,0,0,0.202117188958219,0.217716747896961,0,2.35732185551056,0,0,0.244209805832924,0,0,0.269475606319761,0,0,0,0,1.61019034872821,1.60284246151616 | |||
|short_description=p@chr7:2983379..2983381,- | |||
}} |
Latest revision as of 09:16, 31 July 2015
Short description: | p@chr7:2983379..2983381, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:2983379..2983381, - |
Coexpression cluster: | C996_CD4_CD8_Natural_CD19_Whole_blood_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.16e-38 | 52 |
lymphocyte | 6.87e-37 | 53 |
common lymphoid progenitor | 6.87e-37 | 53 |
mature alpha-beta T cell | 2.94e-25 | 18 |
alpha-beta T cell | 2.94e-25 | 18 |
immature T cell | 2.94e-25 | 18 |
mature T cell | 2.94e-25 | 18 |
immature alpha-beta T cell | 2.94e-25 | 18 |
nongranular leukocyte | 2.43e-21 | 115 |
leukocyte | 4.26e-19 | 136 |
T cell | 3.40e-17 | 25 |
pro-T cell | 3.40e-17 | 25 |
hematopoietic lineage restricted progenitor cell | 5.47e-16 | 120 |
lymphocyte of B lineage | 2.09e-15 | 24 |
pro-B cell | 2.09e-15 | 24 |
hematopoietic stem cell | 1.70e-14 | 168 |
CD8-positive, alpha-beta T cell | 3.86e-14 | 11 |
B cell | 4.53e-14 | 14 |
hematopoietic cell | 2.98e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.77e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-11 | 161 |
CD4-positive, alpha-beta T cell | 5.30e-11 | 6 |
natural killer cell | 9.00e-10 | 3 |
pro-NK cell | 9.00e-10 | 3 |
single nucleate cell | 2.68e-09 | 3 |
mononuclear cell | 2.68e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.47e-25 | 15 |
haemolymphatic fluid | 6.47e-25 | 15 |
organism substance | 6.47e-25 | 15 |