FFCP PHASE1:Hg19::chr7:73590068..73590072,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:73590068..73590072,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr7:73590068..73590072,+ | |||
|id=chr7:73590068..73590072,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.17e-20!140;CL:0002087!5.29e-18!119;CL:0002031!6.15e-17!124;CL:0000037!7.39e-17!172;CL:0000566!7.39e-17!172;CL:0000988!3.66e-16!182;CL:0002032!5.19e-15!165;CL:0000837!5.19e-15!165;CL:0000838!5.54e-12!52;CL:0000542!1.62e-11!53;CL:0000051!1.62e-11!53;CL:0000766!1.66e-07!76;CL:0000084!3.63e-07!25;CL:0000827!3.63e-07!25;CL:0000557!8.27e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.06e-27;3!CL:0000791;6.12e-23;18!CL:0000789;6.12e-23;18!CL:0002419;6.12e-23;18!CL:0000084;2.52e-16;25!CL:0000542;7.95e-15;53!CL:0000624;1.28e-13;6!CL:0000625;6.04e-13;11!CL:0000767;2.67e-12;3!CL:0000094;2.38e-10;8!CL:0000511;7.54e-10;1!CL:0002625;7.54e-10;1!CL:0000216;7.54e-10;1!CL:0000081;1.16e-07;11!CL:0002393;9.14e-07;6!CL:0002397;9.14e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.73e-27,3;CL:0000825,2.73e-27,3;CL:0000838,3.33e-26,52;CL:0000542,1.14e-25,53;CL:0000051,1.14e-25,53;CL:0000791,6.24e-23,18;CL:0000789,6.24e-23,18;CL:0002420,6.24e-23,18;CL:0002419,6.24e-23,18;CL:0000790,6.24e-23,18;CL:0000738,2.81e-22,136;CL:0000037,1.56e-19,168;CL:0002032,2.09e-18,161;CL:0000837,2.09e-18,161;CL:0000988,2.22e-18,177;CL:0002087,1.40e-16,115;CL:0000084,2.55e-16,25;CL:0000827,2.55e-16,25;CL:0002031,8.77e-16,120;CL:0000624,1.29e-13,6;CL:0000625,6.14e-13,11;CL:0000767,3.37e-12,3;CL:0000094,2.62e-10,8;CL:0000511,6.33e-10,1;CL:0002625,6.33e-10,1;CL:0000216,6.33e-10,1;CL:0000081,1.25e-07,11;CL:0000134,1.63e-07,354;CL:0002320,2.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;6.12e-23;18!CL:0000051;7.95e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.89e-08!102;UBERON:0003061!5.89e-08!102;UBERON:0002193!1.40e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.54e-10;1!UBERON:0001343;7.54e-10;1!UBERON:0004910;7.54e-10;1!UBERON:0004813;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.33e-10,1;UBERON:0001343,6.33e-10,1;UBERON:0004910,6.33e-10,1;UBERON:0005154,6.33e-10,1;UBERON:0005295,6.33e-10,1;UBERON:0004813,6.33e-10,1;UBERON:0005297,6.33e-10,1;UBERON:0005294,6.33e-10,1;UBERON:0010141,6.33e-10,1;UBERON:0005891,6.33e-10,1;UBERON:0002384,5.24e-07,371 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.152826811495903,0.164201178899891,0.157421562627358,1.18009283054671,1.53531759238885,0.154816123316076,0,0,0,0.154934401160603,0.568676929949686,0.293600439334847,3.32397245119126,0.802177789880567,1.73608696572681,0.223915474239924,0,0.515151135268373,0.290796477559129,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0.28769239232215,0.768482119587302,0,0,0,0,0,0.272906150057846,0.449446968890169,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,0.673971786878971,0.450530678524519,0,0.285012743741249,0,0.730656615058536,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0,2.27685187643779,2.93618594685469,1.91136614062614,0,0.560508562981536,0.263384084775077,1.57367816091066,3.53709686474248,1.43921049299656,0,0,0.946895611469467,0,0.111410456885174,0,0,0.812411591295047,0.25618263945135,0.260118695119756,0.493313713811028,0.276350017785848,0,0.14828656316206,0.802622484269139,1.04535523804977,0.226618685395132,0.766440987203842,0,0.253019692019503,0.637130828648193,1.30216690771284,0.950452044448374,0,0,0,0,0.821127996921047,1.81446068902259,4.54648332831962,2.31719046212478,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.0654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0.231860809950154,0,0,0.462985512576611,0.380508304469197,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,2.36436912242313,2.80315847317372,2.95188983443421,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.862856803274467,0.320182673410333,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.170453254832202,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.445773537109913,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0.422250816255987,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.874813840149763,0.347249989866585,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0.470940769185074,0,0,0.19606253431774,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,0.247127877893006,0.208843899010911,0.134802265961354,0,0.234264445725339,0.364909578431332,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0.315132729228895,0.0824158583811665,0,0.295282444544246,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0.415440338029185,0,0.77380195455795,0,0.335434687599266,0.236417121897595,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.21444159137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| |||
|short_description=p@chr7:73590068..73590072,+ | |||
}} |
Latest revision as of 11:33, 31 July 2015
Short description: | p@chr7:73590068..73590072, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:73590068..73590072, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.73e-27 | 3 |
pro-NK cell | 2.73e-27 | 3 |
lymphoid lineage restricted progenitor cell | 3.33e-26 | 52 |
lymphocyte | 1.14e-25 | 53 |
common lymphoid progenitor | 1.14e-25 | 53 |
mature alpha-beta T cell | 6.24e-23 | 18 |
alpha-beta T cell | 6.24e-23 | 18 |
immature T cell | 6.24e-23 | 18 |
mature T cell | 6.24e-23 | 18 |
immature alpha-beta T cell | 6.24e-23 | 18 |
leukocyte | 2.81e-22 | 136 |
hematopoietic stem cell | 1.56e-19 | 168 |
hematopoietic oligopotent progenitor cell | 2.09e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-18 | 161 |
hematopoietic cell | 2.22e-18 | 177 |
nongranular leukocyte | 1.40e-16 | 115 |
T cell | 2.55e-16 | 25 |
pro-T cell | 2.55e-16 | 25 |
hematopoietic lineage restricted progenitor cell | 8.77e-16 | 120 |
CD4-positive, alpha-beta T cell | 1.29e-13 | 6 |
CD8-positive, alpha-beta T cell | 6.14e-13 | 11 |
basophil | 3.37e-12 | 3 |
granulocyte | 2.62e-10 | 8 |
androgen binding protein secreting cell | 6.33e-10 | 1 |
seminiferous tubule epithelial cell | 6.33e-10 | 1 |
Sertoli cell | 6.33e-10 | 1 |
blood cell | 1.25e-07 | 11 |
mesenchymal cell | 1.63e-07 | 354 |
connective tissue cell | 2.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.33e-10 | 1 |
seminiferous tubule of testis | 6.33e-10 | 1 |
epithelium of male gonad | 6.33e-10 | 1 |
epithelial cord | 6.33e-10 | 1 |
sex cord | 6.33e-10 | 1 |
seminiferous tubule epithelium | 6.33e-10 | 1 |
testis sex cord | 6.33e-10 | 1 |
genital ridge | 6.33e-10 | 1 |
primitive sex cord of indifferent gonad | 6.33e-10 | 1 |
coelomic epithelium | 6.33e-10 | 1 |
connective tissue | 5.24e-07 | 371 |