FFCP PHASE1:Hg19::chr7:77233549..77233553,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:77233549..77233553,+
|short_description=p@chr7:77233549..77233553,+
|description=CAGE_peak_at_chr7:77233549..77233553,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:77233549..77233553,+ | |||
|description=CAGE_peak_at_chr7:77233549..77233553,+ | |||
|id=chr7:77233549..77233553,+ | |||
|ontology_enrichment_celltype=CL:0002009!3.88e-12!65;CL:0002194!2.92e-11!63;CL:0000576!2.92e-11!63;CL:0000040!2.92e-11!63;CL:0000559!2.92e-11!63;CL:0000860!7.61e-11!45;CL:0002057!8.84e-11!42;CL:0000557!2.67e-10!71;CL:0000839!1.21e-09!70;CL:0000766!1.43e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.53e-30;33!CL:0002057;2.53e-30;33!CL:0000473;4.48e-25;39!CL:0000234;4.48e-25;39!CL:0000576;6.56e-25;48!CL:0000766;5.99e-14;69!CL:0000763;2.38e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.67e-33,42;CL:0002057,5.67e-33,42;CL:0000473,2.75e-32,48;CL:0000234,2.75e-32,48;CL:0002009,1.37e-30,61;CL:0002194,3.08e-28,59;CL:0000576,3.08e-28,59;CL:0000040,3.08e-28,59;CL:0000559,3.08e-28,59;CL:0000557,1.55e-27,67;CL:0000766,2.36e-25,72;CL:0000839,6.87e-25,66;CL:0000763,1.23e-19,108;CL:0000049,1.23e-19,108;CL:0002031,2.22e-15,120;CL:0000738,1.08e-14,136;CL:0002087,2.10e-14,115;CL:0002032,3.97e-13,161;CL:0000837,3.97e-13,161;CL:0000037,2.15e-12,168;CL:0000988,1.55e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,5.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-11!115;UBERON:0002193!6.13e-08!112;UBERON:0001049!1.11e-07!57;UBERON:0005068!1.11e-07!57;UBERON:0006241!1.11e-07!57;UBERON:0007135!1.11e-07!57;UBERON:0002371!1.25e-07!80;UBERON:0001474!3.30e-07!86;UBERON:0002390!4.41e-07!102;UBERON:0003061!4.41e-07!102;UBERON:0002405!8.77e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.58e-24,76;UBERON:0001474,7.85e-22,82;UBERON:0004765,1.47e-19,90;UBERON:0002405,8.33e-19,93;UBERON:0002390,1.18e-17,98;UBERON:0003061,1.18e-17,98;UBERON:0001434,3.18e-17,100;UBERON:0002193,1.15e-15,108;UBERON:0002204,8.93e-09,167;UBERON:0003081,1.75e-07,203 | |||
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| ||
|short_description=p@chr7:77233549..77233553,+ | |||
}} | }} |
Latest revision as of 11:51, 31 July 2015
Short description: | p@chr7:77233549..77233553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:77233549..77233553, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.67e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.67e-33 | 42 |
defensive cell | 2.75e-32 | 48 |
phagocyte | 2.75e-32 | 48 |
macrophage dendritic cell progenitor | 1.37e-30 | 61 |
monopoietic cell | 3.08e-28 | 59 |
monocyte | 3.08e-28 | 59 |
monoblast | 3.08e-28 | 59 |
promonocyte | 3.08e-28 | 59 |
granulocyte monocyte progenitor cell | 1.55e-27 | 67 |
myeloid leukocyte | 2.36e-25 | 72 |
myeloid lineage restricted progenitor cell | 6.87e-25 | 66 |
myeloid cell | 1.23e-19 | 108 |
common myeloid progenitor | 1.23e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.22e-15 | 120 |
leukocyte | 1.08e-14 | 136 |
nongranular leukocyte | 2.10e-14 | 115 |
hematopoietic oligopotent progenitor cell | 3.97e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-13 | 161 |
hematopoietic stem cell | 2.15e-12 | 168 |
hematopoietic cell | 1.55e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.58e-24 | 76 |
bone element | 7.85e-22 | 82 |
skeletal element | 1.47e-19 | 90 |
immune system | 8.33e-19 | 93 |
hematopoietic system | 1.18e-17 | 98 |
blood island | 1.18e-17 | 98 |
skeletal system | 3.18e-17 | 100 |
hemolymphoid system | 1.15e-15 | 108 |
musculoskeletal system | 8.93e-09 | 167 |
lateral plate mesoderm | 1.75e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.84e-07 | 1 |