FFCP PHASE1:Hg19::chr7:80372586..80372597,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:80372586..80372597,- | |||
|description=CAGE_peak_at_chr7:80372586..80372597,- | |||
|id=chr7:80372586..80372597,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000214;4.44e-18;3!CL:0000511;3.73e-14;1!CL:0002625;3.73e-14;1!CL:0000216;3.73e-14;1!CL:0000153;2.79e-13;9!CL:0000447;2.79e-13;9!CL:0000327;3.47e-08;15!CL:0000047;1.70e-07;2!CL:0000499;1.72e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,4.26e-18,3;CL:0000511,3.98e-14,1;CL:0002625,3.98e-14,1;CL:0000216,3.98e-14,1;CL:0000153,2.57e-13,9;CL:0000447,2.57e-13,9;CL:0000327,3.30e-08,15;CL:0000499,1.67e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.74e-10!14;DOID:120!1.07e-09!27;DOID:193!1.15e-08!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!4.60e-08!6;UBERON:0002358!4.60e-08!6;UBERON:0003684!4.60e-08!6;UBERON:0001178!4.60e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.27e-22;9!UBERON:0000042;1.27e-22;9!UBERON:0006915;4.44e-18;3!UBERON:0007616;4.44e-18;3!UBERON:0002217;4.44e-18;3!UBERON:0002018;4.44e-18;3!UBERON:0001136;3.73e-14;1!UBERON:0001343;3.73e-14;1!UBERON:0004910;3.73e-14;1!UBERON:0004813;3.73e-14;1!UBERON:0003688;3.41e-09;6!UBERON:0002358;3.41e-09;6!UBERON:0003684;3.41e-09;6!UBERON:0001178;3.41e-09;6!UBERON:0004909;1.02e-07;2!UBERON:0004905;2.41e-07;8!UBERON:0000982;2.41e-07;8!UBERON:0004770;2.41e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,4.26e-18,3;UBERON:0007616,4.26e-18,3;UBERON:0002217,4.26e-18,3;UBERON:0002018,4.26e-18,3;UBERON:0004457,5.67e-17,12;UBERON:0000042,5.67e-17,12;UBERON:0001136,3.98e-14,1;UBERON:0001343,3.98e-14,1;UBERON:0004910,3.98e-14,1;UBERON:0005154,3.98e-14,1;UBERON:0005295,3.98e-14,1;UBERON:0004813,3.98e-14,1;UBERON:0005297,3.98e-14,1;UBERON:0005294,3.98e-14,1;UBERON:0010141,3.98e-14,1;UBERON:0005891,3.98e-14,1;UBERON:0003688,4.20e-09,6;UBERON:0002358,4.20e-09,6;UBERON:0003684,4.20e-09,6;UBERON:0001178,4.20e-09,6;UBERON:0004909,1.05e-07,2;UBERON:0004905,2.37e-07,8;UBERON:0000982,2.37e-07,8;UBERON:0004770,2.37e-07,8 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.264818361626438,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,0,0,0.600182192168805,0,0,0.18611685633159,0.506328996723799,0,0,0.184099797284599,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.671928512795438,0.141775097242386,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0.837581326671744,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.841980283299221,0.384417447767103,0.511707249066704,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0,0,0,0.429680979473094,0,0,0,0.495854746082934,0,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.235624804691373,0.202182481573316,1.58510321173008,0,0,0.487426979262569,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,4.85547561184627,3.29294892959902,0,0,0,0.670302275535787,0,0,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,0.632994193584081,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.694238953340524,0,0.0870592065804026,0.17472666824203,0.687944129886466,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0.144090417154106,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.235265819698172,0.468334905806882,0,0.149254802886874,0,0,0,0.251567901752575,1.77962244319307,0,0.302461847526478,0,0.443565449968902,0.159296767163702,0.449803112163605,0.310525913752519,0.414706207840855,0.265841714557995,1.5652351854352,0.300515217994437,1.14241563650639,0,0.363697318405119,0.214821114084977,0.928067519756987,0.398095888698616,0.400027764663154,0,0.673498977531838,0,0,0,0.260994291965212,0,0,0,0,1.23520578864389,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0,0,0,0.231051332300676,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0.766574565837572,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0.431855182437243,1.43325506366115,0,0,0,0.347716544605159,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,2.23197010900051,0.462175628631418,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:80372586..80372597,- | |||
}} |
Latest revision as of 12:00, 31 July 2015
Short description: | p@chr7:80372586..80372597, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:80372586..80372597, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 4.26e-18 | 3 |
androgen binding protein secreting cell | 3.98e-14 | 1 |
seminiferous tubule epithelial cell | 3.98e-14 | 1 |
Sertoli cell | 3.98e-14 | 1 |
GAG secreting cell | 2.57e-13 | 9 |
carbohydrate secreting cell | 2.57e-13 | 9 |
extracellular matrix secreting cell | 3.30e-08 | 15 |
stromal cell | 1.67e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 4.26e-18 | 3 |
layer of synovial tissue | 4.26e-18 | 3 |
synovial joint | 4.26e-18 | 3 |
synovial membrane of synovial joint | 4.26e-18 | 3 |
cavity lining | 5.67e-17 | 12 |
serous membrane | 5.67e-17 | 12 |
mesothelium | 3.98e-14 | 1 |
seminiferous tubule of testis | 3.98e-14 | 1 |
epithelium of male gonad | 3.98e-14 | 1 |
epithelial cord | 3.98e-14 | 1 |
sex cord | 3.98e-14 | 1 |
seminiferous tubule epithelium | 3.98e-14 | 1 |
testis sex cord | 3.98e-14 | 1 |
genital ridge | 3.98e-14 | 1 |
primitive sex cord of indifferent gonad | 3.98e-14 | 1 |
coelomic epithelium | 3.98e-14 | 1 |
omentum | 4.20e-09 | 6 |
peritoneum | 4.20e-09 | 6 |
abdominal cavity | 4.20e-09 | 6 |
visceral peritoneum | 4.20e-09 | 6 |
epithelium of gonad | 1.05e-07 | 2 |
articulation | 2.37e-07 | 8 |
skeletal joint | 2.37e-07 | 8 |
articular system | 2.37e-07 | 8 |