FFCP PHASE1:Hg19::chr7:94060437..94060448,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:94060437..94060448,+ | |||
|description=CAGE_peak_at_chr7:94060437..94060448,+ | |||
|id=chr7:94060437..94060448,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.00e-12!180;CL:0000197!4.83e-09!6;CL:0000098!4.83e-09!6;CL:0002167!4.83e-09!6;CL:0000680!3.63e-07!57;CL:0000056!3.63e-07!57;CL:0000355!3.63e-07!57;CL:0002579!4.59e-07!3;CL:0000187!7.46e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000197;1.03e-14;6!CL:0000098;1.03e-14;6!CL:0002569;1.03e-14;6!CL:0002167;1.03e-14;6!CL:0002568;9.04e-11;1!CL:0002620;6.80e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.03e-14,6;CL:0000098,1.03e-14,6;CL:0002167,1.03e-14,6;CL:0002569,1.19e-14,6;CL:0002568,1.46e-10,1;CL:0002620,7.08e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.75e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;9.04e-11;1!DOID:17;1.27e-08;5!DOID:450;1.27e-08;5!DOID:66;1.27e-08;5!DOID:423;1.27e-08;5!DOID:0080000;1.27e-08;5!DOID:11722;1.27e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,4.58e-11,1;DOID:17,1.09e-08,5;DOID:450,1.09e-08,5;DOID:66,1.09e-08,5;DOID:423,1.09e-08,5;DOID:0080000,1.09e-08,5;DOID:11722,1.09e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.47e-08!61;UBERON:0002036!2.47e-08!61;UBERON:0003082!2.47e-08!61;UBERON:0002385!6.65e-08!63;UBERON:0001015!6.65e-08!63;UBERON:0000383!6.65e-08!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.92e-15;10!UBERON:0003422;1.03e-14;6!UBERON:0003104;1.07e-12;7!UBERON:0009142;1.07e-12;7!UBERON:0003688;2.23e-07;6!UBERON:0002358;2.23e-07;6!UBERON:0003684;2.23e-07;6!UBERON:0001178;2.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.15e-15,10;UBERON:0000358,2.15e-15,10;UBERON:0000307,2.15e-15,10;UBERON:0000091,2.15e-15,10;UBERON:0000087,2.15e-15,10;UBERON:0007010,2.15e-15,10;UBERON:0007806,2.15e-15,10;UBERON:0008780,2.15e-15,10;UBERON:0005728,2.15e-15,10;UBERON:0003422,1.19e-14,6;UBERON:0003688,1.84e-07,6;UBERON:0002358,1.84e-07,6;UBERON:0003684,1.84e-07,6;UBERON:0001178,1.84e-07,6;UBERON:0002199,4.06e-07,46;UBERON:0002416,4.06e-07,46 | |||
|phase1_expression=0.908391896352783,0.214100523890983,1.83240725324762,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.361439152384566,1.00267582127178,0.434539556882471,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0,0,0,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,2.13557388818567,1.69545520927649,0.300091096084402,0,0,0.744467425326359,1.0126579934476,0,0,4.32634523618807,0,0,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,1.03417372606222,0,0,0.531876233169741,0,0.257207374262142,0,0,0.285955987316295,1.62786481617433,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,1.19812427745791,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,1.07057393278297,0.630809660135739,0.937131319941706,0.902838299183157,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0.280660094433074,7.81648810459776,0.511707249066704,0.64341568457443,0,0,0,0.164254312027618,0,0,0,0,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.322260734604821,0.290033387828457,0,0.445160178233687,0,0,0,0,0,0,0.6970372701606,1.54016790088044,0.532306030317022,0,0.18532421910392,0,0.744316738719335,0,0,0.511795582622668,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.808729926293264,0,0,0,0,0,0.272999822815972,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29787968637137,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,1.1903221573187,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.99798106963804,0,0,0,0,2.34640942403454,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr7:94060437..94060448,+ | |||
}} |
Latest revision as of 12:49, 31 July 2015
Short description: | p@chr7:94060437..94060448, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:94060437..94060448, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.03e-14 | 6 |
sensory epithelial cell | 1.03e-14 | 6 |
olfactory epithelial cell | 1.03e-14 | 6 |
mesenchymal stem cell of umbilical cord | 1.19e-14 | 6 |
mesenchymal stem cell of Wharton's jelly | 1.46e-10 | 1 |
skin fibroblast | 7.08e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.15e-15 | 10 |
blastocyst | 2.15e-15 | 10 |
blastula | 2.15e-15 | 10 |
bilaminar disc | 2.15e-15 | 10 |
inner cell mass | 2.15e-15 | 10 |
cleaving embryo | 2.15e-15 | 10 |
connecting stalk | 2.15e-15 | 10 |
inner cell mass derived epiblast | 2.15e-15 | 10 |
extraembryonic mesoderm | 2.15e-15 | 10 |
mesenchyme of umbilical cord | 1.19e-14 | 6 |
omentum | 1.84e-07 | 6 |
peritoneum | 1.84e-07 | 6 |
abdominal cavity | 1.84e-07 | 6 |
visceral peritoneum | 1.84e-07 | 6 |
integument | 4.06e-07 | 46 |
integumental system | 4.06e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 4.58e-11 | 1 |
musculoskeletal system disease | 1.09e-08 | 5 |
myotonic disease | 1.09e-08 | 5 |
muscle tissue disease | 1.09e-08 | 5 |
myopathy | 1.09e-08 | 5 |
muscular disease | 1.09e-08 | 5 |
myotonic dystrophy | 1.09e-08 | 5 |