FFCP PHASE1:Hg19::chr8:128817909..128817920,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:128817909..128817920,+ | |||
|coexpression_cluster_id=C1285 | |coexpression_cluster_id=C1285 | ||
|description=CAGE_peak_at_chr8:128817909..128817920,+ | |description=CAGE_peak_at_chr8:128817909..128817920,+ | ||
|id=chr8:128817909..128817920,+ | |id=chr8:128817909..128817920,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;6.30e-26;2!CL:0002563;1.06e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,5.56e-26,2;CL:0002563,1.00e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.50e-11!239;DOID:162!2.84e-11!235;DOID:0050687!3.06e-08!143;DOID:3119!5.42e-07!14 | |ontology_enrichment_disease=DOID:14566!1.50e-11!239;DOID:162!2.84e-11!235;DOID:0050687!3.06e-08!143;DOID:3119!5.42e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.41e-15;14!DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.41e-15,14;DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.06e-13;4!UBERON:0001242;1.06e-13;4!UBERON:0001262;1.06e-13;4!UBERON:0004786;1.06e-13;4!UBERON:0004808;1.06e-13;4!UBERON:0001277;1.06e-13;4!UBERON:0002346;1.29e-13;4!UBERON:0000923;1.29e-13;4!UBERON:0010316;1.29e-13;4!UBERON:0005291;1.29e-13;4!UBERON:0004907;3.10e-11;5!UBERON:0002050;3.60e-11;5!UBERON:0005423;3.60e-11;5!UBERON:0000485;2.11e-08;7!UBERON:0003929;2.11e-08;7!UBERON:0003350;1.64e-07;8!UBERON:0001155;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.00e-13,4;UBERON:0001242,1.00e-13,4;UBERON:0001262,1.00e-13,4;UBERON:0004786,1.00e-13,4;UBERON:0004808,1.00e-13,4;UBERON:0001277,1.00e-13,4;UBERON:0004907,2.94e-11,5;UBERON:0003350,1.59e-07,8;UBERON:0001155,7.91e-07,9;UBERON:0000485,7.91e-07,9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,2.04123229368278,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,2.81305231664718,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0.0967563312890851,0,0,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0.144090417154106,0,0.343189995723929,0.720273989940749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0,0.438568099157414,0,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.314531883711793,0.436838552768056,1.01839517972415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,4.17773963632631,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:128817909..128817920,+ | |short_description=p@chr8:128817909..128817920,+ | ||
}} | }} |
Latest revision as of 14:56, 31 July 2015
Short description: | p@chr8:128817909..128817920, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128817909..128817920, + |
Coexpression cluster: | C1285_small_colon_carcinoid_argyrophil_neuroectodermal_giant_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 5.56e-26 | 2 |
intestinal epithelial cell | 1.00e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.00e-13 | 4 |
intestinal mucosa | 1.00e-13 | 4 |
wall of intestine | 1.00e-13 | 4 |
gastrointestinal system mucosa | 1.00e-13 | 4 |
gastrointestinal system epithelium | 1.00e-13 | 4 |
intestinal epithelium | 1.00e-13 | 4 |
lower digestive tract | 2.94e-11 | 5 |
epithelium of mucosa | 1.59e-07 | 8 |
colon | 7.91e-07 | 9 |
simple columnar epithelium | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.41e-15 | 14 |
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |