FFCP PHASE1:Hg19::chr8:128824442..128824444,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:128824442..128824444,+
|short_description=p@chr8:128824442..128824444,+
|description=CAGE_peak_at_chr8:128824442..128824444,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:128824442..128824444,+ | |||
|coexpression_cluster_id=C1285 | |||
|description=CAGE_peak_at_chr8:128824442..128824444,+ | |||
|id=chr8:128824442..128824444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;7.14e-26;2!CL:0002535;7.14e-26;2!CL:0002563;1.13e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.14e-26,2;CL:0002535,9.18e-26,2;CL:0002563,1.13e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!8.04e-16!239;DOID:162!9.54e-16!235;DOID:0050687!5.97e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.17e-15;14!DOID:5409;1.13e-13;4!DOID:4362;3.26e-11;5!DOID:1325;2.18e-08;7!DOID:3904;2.18e-08;7!DOID:3905;8.37e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.17e-15,14;DOID:5409,1.00e-13,4;DOID:4362,3.60e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.14e-26;2!UBERON:0004801;7.14e-26;2!UBERON:0001052;1.13e-13;4!UBERON:0001242;1.13e-13;4!UBERON:0001262;1.13e-13;4!UBERON:0004786;1.13e-13;4!UBERON:0004808;1.13e-13;4!UBERON:0001277;1.13e-13;4!UBERON:0004907;3.26e-11;5!UBERON:0000002;1.44e-09;6!UBERON:0001560;1.44e-09;6!UBERON:0000485;2.18e-08;7!UBERON:0003929;2.18e-08;7!UBERON:0003350;1.69e-07;8!UBERON:0001155;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.18e-26,2;UBERON:0004801,9.18e-26,2;UBERON:0001052,1.13e-13,4;UBERON:0001242,1.13e-13,4;UBERON:0001262,1.13e-13,4;UBERON:0004786,1.13e-13,4;UBERON:0004808,1.13e-13,4;UBERON:0001277,1.13e-13,4;UBERON:0004907,3.26e-11,5;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0003350,1.69e-07,8;UBERON:0001155,8.37e-07,9;UBERON:0000485,8.37e-07,9 | |||
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| ||
|short_description=p@chr8:128824442..128824444,+ | |||
}} | }} |
Latest revision as of 14:56, 31 July 2015
Short description: | p@chr8:128824442..128824444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128824442..128824444, + |
Coexpression cluster: | C1285_small_colon_carcinoid_argyrophil_neuroectodermal_giant_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.14e-26 | 2 |
epithelial cell of cervix | 9.18e-26 | 2 |
intestinal epithelial cell | 1.13e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.18e-26 | 2 |
cervix epithelium | 9.18e-26 | 2 |
rectum | 1.13e-13 | 4 |
intestinal mucosa | 1.13e-13 | 4 |
wall of intestine | 1.13e-13 | 4 |
gastrointestinal system mucosa | 1.13e-13 | 4 |
gastrointestinal system epithelium | 1.13e-13 | 4 |
intestinal epithelium | 1.13e-13 | 4 |
lower digestive tract | 3.26e-11 | 5 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
epithelium of mucosa | 1.69e-07 | 8 |
colon | 8.37e-07 | 9 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.17e-15 | 14 |
lung small cell carcinoma | 1.00e-13 | 4 |
cervical cancer | 3.60e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |