FFCP PHASE1:Hg19::chr8:38441495..38441504,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:38441495..38441504,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr8:38441495..38441504,+ | |||
|id=chr8:38441495..38441504,+ | |||
|ontology_enrichment_celltype=CL:0002253!1.54e-15!2;CL:0002563!1.96e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002253;7.05e-34;2!CL:0002563;1.03e-17;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,7.05e-34,2;CL:0002563,1.03e-17,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!3.16e-29!1;DOID:1357!3.16e-29!1;DOID:3119!3.88e-09!14;DOID:5409!1.70e-08!4;DOID:0050615!4.42e-08!16;DOID:4362!6.04e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.13e-20;14!DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14;DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001764!3.16e-29!1;UBERON:0001825!3.16e-29!1;UBERON:0000007!1.78e-15!2;UBERON:0001052!1.96e-08!4;UBERON:0001242!1.96e-08!4;UBERON:0001262!1.96e-08!4;UBERON:0004786!1.96e-08!4;UBERON:0004808!1.96e-08!4;UBERON:0001277!1.96e-08!4;UBERON:0003296!2.11e-08!4;UBERON:0010133!2.11e-08!4;UBERON:0003350!5.38e-07!5;UBERON:0004907!5.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0004907;1.83e-14;5!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8!UBERON:0001155;1.21e-08;9!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0003350,1.47e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000485,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
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|short_description=p@chr8:38441495..38441504,+ | |||
}} | }} |
Latest revision as of 18:12, 31 July 2015
Short description: | p@chr8:38441495..38441504, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:38441495..38441504, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 7.05e-34 | 2 |
intestinal epithelial cell | 1.03e-17 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
epithelium of mucosa | 1.47e-09 | 8 |
colon | 1.21e-08 | 9 |
simple columnar epithelium | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.13e-20 | 14 |
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |