FFCP PHASE1:Hg19::chr8:39807228..39807234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:39807228..39807234,- | |||
|coexpression_cluster_id=C432 | |coexpression_cluster_id=C432 | ||
|description=CAGE_peak_at_chr8:39807228..39807234,- | |description=CAGE_peak_at_chr8:39807228..39807234,- | ||
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|ontology_enrichment_celltype=CL:0002057!4.48e-81!42;CL:0000860!2.66e-75!45;CL:0002009!4.81e-58!65;CL:0000557!1.02e-52!71;CL:0000766!1.31e-52!76;CL:0002194!2.69e-51!63;CL:0000576!2.69e-51!63;CL:0000040!2.69e-51!63;CL:0000559!2.69e-51!63;CL:0000839!1.09e-45!70;CL:0000763!2.14e-39!112;CL:0000049!2.14e-39!112;CL:0000738!2.25e-37!140;CL:0002031!1.69e-32!124;CL:0002087!1.43e-31!119;CL:0000037!2.99e-29!172;CL:0000566!2.99e-29!172;CL:0002032!1.09e-28!165;CL:0000837!1.09e-28!165;CL:0000988!2.71e-27!182;CL:0001014!1.18e-11!2;CL:0001016!1.18e-11!2;CL:0000134!1.26e-10!358;CL:0002320!2.73e-10!365;CL:0000219!4.10e-09!390;CL:0000034!8.85e-09!444;CL:0000048!1.74e-08!430;CL:0000723!2.85e-08!436;CL:0000767!1.09e-07!3 | |ontology_enrichment_celltype=CL:0002057!4.48e-81!42;CL:0000860!2.66e-75!45;CL:0002009!4.81e-58!65;CL:0000557!1.02e-52!71;CL:0000766!1.31e-52!76;CL:0002194!2.69e-51!63;CL:0000576!2.69e-51!63;CL:0000040!2.69e-51!63;CL:0000559!2.69e-51!63;CL:0000839!1.09e-45!70;CL:0000763!2.14e-39!112;CL:0000049!2.14e-39!112;CL:0000738!2.25e-37!140;CL:0002031!1.69e-32!124;CL:0002087!1.43e-31!119;CL:0000037!2.99e-29!172;CL:0000566!2.99e-29!172;CL:0002032!1.09e-28!165;CL:0000837!1.09e-28!165;CL:0000988!2.71e-27!182;CL:0001014!1.18e-11!2;CL:0001016!1.18e-11!2;CL:0000134!1.26e-10!358;CL:0002320!2.73e-10!365;CL:0000219!4.10e-09!390;CL:0000034!8.85e-09!444;CL:0000048!1.74e-08!430;CL:0000723!2.85e-08!436;CL:0000767!1.09e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.11e-70;33!CL:0002057;2.11e-70;33!CL:0000473;5.67e-47;39!CL:0000234;5.67e-47;39!CL:0000576;1.42e-36;48!CL:0000766;2.35e-21;69!CL:0002087;1.92e-10;104!CL:0000763;3.56e-10;100!CL:0000738;5.13e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.11e-70;33!CL:0002057;2.11e-70;33!CL:0000473;5.67e-47;39!CL:0000234;5.67e-47;39!CL:0000576;1.42e-36;48!CL:0000766;2.35e-21;69!CL:0002087;1.92e-10;104!CL:0000763;3.56e-10;100!CL:0000738;5.13e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.76e-69,42;CL:0002057,3.76e-69,42;CL:0000473,2.64e-60,48;CL:0000234,2.64e-60,48;CL:0002194,6.53e-48,59;CL:0000576,6.53e-48,59;CL:0000040,6.53e-48,59;CL:0000559,6.53e-48,59;CL:0002009,2.60e-46,61;CL:0000766,2.79e-44,72;CL:0000839,9.96e-43,66;CL:0000557,4.49e-42,67;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,6.38e-24,115;CL:0002031,7.42e-23,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-50;42!CL:0000049;2.89e-09;108 | |ontology_enrichment_development_v019=CL:0002057;2.11e-50;42!CL:0000049;2.89e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-46!80;UBERON:0002390!7.70e-44!102;UBERON:0003061!7.70e-44!102;UBERON:0001474!1.29e-42!86;UBERON:0002193!2.08e-39!112;UBERON:0004765!1.76e-35!101;UBERON:0001434!1.76e-35!101;UBERON:0002405!1.75e-30!115;UBERON:0002204!3.30e-19!167;UBERON:0003081!1.73e-17!216;UBERON:0002384!7.78e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!3.29e-46!80;UBERON:0002390!7.70e-44!102;UBERON:0003061!7.70e-44!102;UBERON:0001474!1.29e-42!86;UBERON:0002193!2.08e-39!112;UBERON:0004765!1.76e-35!101;UBERON:0001434!1.76e-35!101;UBERON:0002405!1.75e-30!115;UBERON:0002204!3.30e-19!167;UBERON:0003081!1.73e-17!216;UBERON:0002384!7.78e-10!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.92e-37,76;UBERON:0001474,3.73e-34,82;UBERON:0004765,5.38e-31,90;UBERON:0002405,5.99e-30,93;UBERON:0002390,2.41e-28,98;UBERON:0003061,2.41e-28,98;UBERON:0001434,9.52e-28,100;UBERON:0002193,1.41e-25,108;UBERON:0002204,6.35e-16,167;UBERON:0003081,9.26e-13,203;UBERON:0000926,1.75e-07,315;UBERON:0004120,1.75e-07,315;UBERON:0006603,1.75e-07,315;UBERON:0002384,4.69e-07,371 | |||
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|short_description=p@chr8:39807228..39807234,- | |short_description=p@chr8:39807228..39807234,- | ||
}} | }} |
Latest revision as of 18:20, 31 July 2015
Short description: | p@chr8:39807228..39807234, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:39807228..39807234, - |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.76e-69 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.76e-69 | 42 |
defensive cell | 2.64e-60 | 48 |
phagocyte | 2.64e-60 | 48 |
monopoietic cell | 6.53e-48 | 59 |
monocyte | 6.53e-48 | 59 |
monoblast | 6.53e-48 | 59 |
promonocyte | 6.53e-48 | 59 |
macrophage dendritic cell progenitor | 2.60e-46 | 61 |
myeloid leukocyte | 2.79e-44 | 72 |
myeloid lineage restricted progenitor cell | 9.96e-43 | 66 |
granulocyte monocyte progenitor cell | 4.49e-42 | 67 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
nongranular leukocyte | 6.38e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.42e-23 | 120 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.92e-37 | 76 |
bone element | 3.73e-34 | 82 |
skeletal element | 5.38e-31 | 90 |
immune system | 5.99e-30 | 93 |
hematopoietic system | 2.41e-28 | 98 |
blood island | 2.41e-28 | 98 |
skeletal system | 9.52e-28 | 100 |
hemolymphoid system | 1.41e-25 | 108 |
musculoskeletal system | 6.35e-16 | 167 |
lateral plate mesoderm | 9.26e-13 | 203 |
mesoderm | 1.75e-07 | 315 |
mesoderm-derived structure | 1.75e-07 | 315 |
presumptive mesoderm | 1.75e-07 | 315 |
connective tissue | 4.69e-07 | 371 |