FFCP PHASE1:Hg19::chr8:76774227..76774234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:76774227..76774234,+ | |||
|coexpression_cluster_id=C186 | |coexpression_cluster_id=C186 | ||
|description=CAGE_peak_at_chr8:76774227..76774234,+ | |description=CAGE_peak_at_chr8:76774227..76774234,+ | ||
|id=chr8:76774227..76774234,+ | |id=chr8:76774227..76774234,+ | ||
|ontology_enrichment_celltype=CL:0000319!3.16e-18!1;CL:0000159!8.69e-10!2;CL:0000054!1.12e-09!2;CL:0000137!1.12e-09!2;CL:0000092!1.12e-09!2 | |ontology_enrichment_celltype=CL:0000319!3.16e-18!1;CL:0000159!8.69e-10!2;CL:0000054!1.12e-09!2;CL:0000137!1.12e-09!2;CL:0000092!1.12e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000319;9.91e-41;1!CL:0000159;3.81e-21;2!CL:0000054;6.96e-21;2!CL:0000137;6.96e-21;2!CL:0000092;6.96e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.91e-41,1;CL:0000159,3.81e-21,2;CL:0000054,6.96e-21,2;CL:0000137,6.96e-21,2;CL:0000092,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-09;5 | |||
|ontology_enrichment_disease=DOID:3030!3.16e-18!1;DOID:0060085!5.26e-18!1;DOID:3165!5.26e-18!1;DOID:0060121!5.26e-18!1;DOID:2438!5.26e-18!1;DOID:4418!5.26e-18!1;DOID:201!5.68e-12!6;DOID:0060100!5.68e-12!6;DOID:200!1.12e-09!2;DOID:4305!1.12e-09!2;DOID:4231!1.71e-09!2;DOID:1907!1.71e-09!2;DOID:3493!2.02e-09!2 | |ontology_enrichment_disease=DOID:3030!3.16e-18!1;DOID:0060085!5.26e-18!1;DOID:3165!5.26e-18!1;DOID:0060121!5.26e-18!1;DOID:2438!5.26e-18!1;DOID:4418!5.26e-18!1;DOID:201!5.68e-12!6;DOID:0060100!5.68e-12!6;DOID:200!1.12e-09!2;DOID:4305!1.12e-09!2;DOID:4231!1.71e-09!2;DOID:1907!1.71e-09!2;DOID:3493!2.02e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3030;9.91e-41;1!DOID:0060085;3.30e-40;1!DOID:3165;3.30e-40;1!DOID:0060121;3.30e-40;1!DOID:2438;3.30e-40;1!DOID:4418;3.30e-40;1!DOID:200;6.96e-21;2!DOID:4305;6.96e-21;2!DOID:0060072;3.79e-11;4!DOID:201;7.25e-08;6!DOID:0060100;7.25e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.91e-41,1;DOID:0060085,3.30e-40,1;DOID:3165,3.30e-40,1;DOID:0060121,3.30e-40,1;DOID:2438,3.30e-40,1;DOID:4418,3.30e-40,1;DOID:200,6.96e-21,2;DOID:4305,6.96e-21,2;DOID:0060072,3.79e-11,4;DOID:201,7.25e-08,6;DOID:0060100,7.25e-08,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;3.79e-11;4!UBERON:0002046;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,3.79e-11,4;UBERON:0002046,2.97e-09,5;UBERON:0004117,2.97e-09,5;UBERON:0007689,2.97e-09,5;UBERON:0007123,2.97e-09,5;UBERON:0003091,2.97e-09,5 | |||
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|short_description=p@chr8:76774227..76774234,+ | |short_description=p@chr8:76774227..76774234,+ | ||
}} | }} |
Latest revision as of 19:56, 31 July 2015
Short description: | p@chr8:76774227..76774234, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:76774227..76774234, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.91e-41 | 1 |
seromucus secreting cell | 3.81e-21 | 2 |
bone matrix secreting cell | 6.96e-21 | 2 |
osteocyte | 6.96e-21 | 2 |
osteoclast | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 3.79e-11 | 4 |
thyroid gland | 2.97e-09 | 5 |
pharyngeal pouch | 2.97e-09 | 5 |
thyroid diverticulum | 2.97e-09 | 5 |
pharyngeal pouch 2 | 2.97e-09 | 5 |
thyroid primordium | 2.97e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.91e-41 | 1 |
organ system benign neoplasm | 3.30e-40 | 1 |
skin benign neoplasm | 3.30e-40 | 1 |
integumentary system benign neoplasm | 3.30e-40 | 1 |
dermis tumor | 3.30e-40 | 1 |
cutaneous fibrous histiocytoma | 3.30e-40 | 1 |
giant cell tumor | 6.96e-21 | 2 |
bone giant cell tumor | 6.96e-21 | 2 |
benign neoplasm | 3.79e-11 | 4 |
connective tissue cancer | 7.25e-08 | 6 |
musculoskeletal system cancer | 7.25e-08 | 6 |