FFCP PHASE1:Hg19::chr8:95652716..95652741,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:95652716..95652741,+ | |||
|description=CAGE_peak_at_chr8:95652716..95652741,+ | |description=CAGE_peak_at_chr8:95652716..95652741,+ | ||
|id=chr8:95652716..95652741,+ | |id=chr8:95652716..95652741,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.32e-27!254;CL:0002076!7.24e-13!43;CL:0000223!4.34e-12!59;CL:0002251!2.12e-08!21;CL:0000082!1.10e-07!19 | |ontology_enrichment_celltype=CL:0000066!3.32e-27!254;CL:0002076!7.24e-13!43;CL:0000223!4.34e-12!59;CL:0002251!2.12e-08!21;CL:0000082!1.10e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000082;4.95e-11;19!CL:0002368;3.78e-09;13!CL:0002076;3.92e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.55e-11,42;CL:0000082,1.19e-10,19;CL:0000066,2.97e-10,253;CL:0000223,5.69e-10,58;CL:0002368,8.61e-09,13 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.19e-10;30 | |||
|ontology_enrichment_disease=DOID:305!1.55e-31!106;DOID:0050687!1.20e-30!143;DOID:162!6.85e-25!235;DOID:14566!1.14e-23!239;DOID:1749!1.07e-12!14;DOID:0050615!6.53e-10!16;DOID:299!1.48e-09!25;DOID:0050686!4.27e-09!137;DOID:1324!5.60e-09!15 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.97e-15;14!DOID:0050615;2.34e-13;16!DOID:1324;4.28e-11;15 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.03e-15,143;DOID:1749,4.87e-15,14;DOID:305,2.17e-13,106;DOID:0050615,5.72e-13,16;DOID:162,3.32e-12,235;DOID:14566,9.00e-12,239;DOID:1324,9.23e-11,15 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.79e-17!169;UBERON:0000925!1.79e-17!169;UBERON:0006595!1.79e-17!169;UBERON:0001007!2.58e-14!155;UBERON:0001555!2.58e-14!155;UBERON:0007026!2.58e-14!155;UBERON:0001004!1.36e-13!72;UBERON:0004921!7.95e-12!129;UBERON:0004185!7.95e-12!129;UBERON:0005153!1.95e-11!37;UBERON:0000464!3.12e-11!104;UBERON:0000077!5.24e-11!130;UBERON:0000466!1.54e-10!126;UBERON:0005911!3.16e-10!82;UBERON:0000065!1.38e-09!53;UBERON:0001041!1.56e-09!98;UBERON:0005178!1.43e-08!34;UBERON:0002224!1.43e-08!34;UBERON:0002048!2.60e-08!22;UBERON:0000117!2.60e-08!22;UBERON:0000171!2.60e-08!22;UBERON:0000170!2.60e-08!22;UBERON:0005597!2.60e-08!22;UBERON:0000118!2.60e-08!22;UBERON:0005181!3.75e-08!35;UBERON:0005157!9.83e-08!51;UBERON:0008947!1.05e-07!38;UBERON:0003258!1.05e-07!38;UBERON:0004802!1.10e-07!19;UBERON:0000115!1.10e-07!19;UBERON:0004807!1.39e-07!28;UBERON:0005177!3.09e-07!107;UBERON:0000344!4.82e-07!12 | |ontology_enrichment_uberon=UBERON:0004119!1.79e-17!169;UBERON:0000925!1.79e-17!169;UBERON:0006595!1.79e-17!169;UBERON:0001007!2.58e-14!155;UBERON:0001555!2.58e-14!155;UBERON:0007026!2.58e-14!155;UBERON:0001004!1.36e-13!72;UBERON:0004921!7.95e-12!129;UBERON:0004185!7.95e-12!129;UBERON:0005153!1.95e-11!37;UBERON:0000464!3.12e-11!104;UBERON:0000077!5.24e-11!130;UBERON:0000466!1.54e-10!126;UBERON:0005911!3.16e-10!82;UBERON:0000065!1.38e-09!53;UBERON:0001041!1.56e-09!98;UBERON:0005178!1.43e-08!34;UBERON:0002224!1.43e-08!34;UBERON:0002048!2.60e-08!22;UBERON:0000117!2.60e-08!22;UBERON:0000171!2.60e-08!22;UBERON:0000170!2.60e-08!22;UBERON:0005597!2.60e-08!22;UBERON:0000118!2.60e-08!22;UBERON:0005181!3.75e-08!35;UBERON:0005157!9.83e-08!51;UBERON:0008947!1.05e-07!38;UBERON:0003258!1.05e-07!38;UBERON:0004802!1.10e-07!19;UBERON:0000115!1.10e-07!19;UBERON:0004807!1.39e-07!28;UBERON:0005177!3.09e-07!107;UBERON:0000344!4.82e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004807;6.47e-12;22!UBERON:0004802;4.95e-11;19!UBERON:0000115;4.95e-11;19!UBERON:0002048;2.43e-09;22!UBERON:0000117;2.43e-09;22!UBERON:0000171;2.43e-09;22!UBERON:0000170;2.43e-09;22!UBERON:0000058;1.43e-08;10!UBERON:0005911;2.00e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.63e-11,37;UBERON:0004802,1.19e-10,19;UBERON:0000115,1.19e-10,19;UBERON:0001004,1.18e-09,74;UBERON:0002048,5.09e-09,22;UBERON:0000117,5.09e-09,22;UBERON:0000171,5.09e-09,22;UBERON:0000170,5.09e-09,22;UBERON:0005597,5.09e-09,22;UBERON:0000118,5.09e-09,22;UBERON:0004807,1.03e-08,28;UBERON:0005157,2.93e-08,47;UBERON:0000065,5.04e-08,54;UBERON:0004119,1.66e-07,160;UBERON:0000925,1.66e-07,160;UBERON:0006595,1.66e-07,160;UBERON:0005178,9.27e-07,34;UBERON:0002224,9.27e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,2.29443676311203,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,1.53650399572076,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,1.17587489739202,0.708875486211932,0.53735113621709,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.460404944679482,0,0,0,0,0.693138033939733,0.784349769176855,0,0.633309773357254,0,0,0,0,0,0,1.01950509218015,1.66215201785745,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,1.40373983744043,1.31505115112215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.48111056362756,0,1.08890984861323,0.0941438007767792,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,1.91311527274587,0.199579371432817,0,0,3.57084134302011,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0.921722292925374,0.894704431569664,1.16794399198336,0,0,0,0,5.66222345596294,0,0.748562161632879,0,0,0,0,0,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,1.3480252672099,1.79021174675609,0,0,0,0,0,0,0,3.9064164162785,4.28553999981359,0,0.796554137998498,1.01701460117107,0.472775363535873,0,0,0.520874984799877,0,0,0,0,0,0,0,0.697118721393016,0.230850775511391,0,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0.489698424477443,0.565412285735763,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,1.56531695145672,0.485560759068186,1.97292201424695,1.20990716048664,0,0,0,0,1.99396161812156,0.330991955875499,0,2.38944859545918,0.569219092059585,0,0.347119476670262,0.293977192243133,1.39294730528644,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.782205530939212,0.320635281006135,0.640358984218058,0,0.144090417154106,0,0,0,1.24252535565433,0.235694034616795,0,0.209205692624666,0,2.88950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.885847333632739,0,0,0,0.482259445395058,0.550157746388935,0,0,0,0,0.670869375198532,0.157611414598396,0.104909176269996,0.739202355635845,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,1.19760786519031,2.11444506695002,0.213574825135389,0,0.828478110694391,0,0,0,1.27668251554036,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.249960815924213,0,0,0.235265819698172,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0.428883182749851,0.260994291965212,0,0.231522474323834,0.244736704506468,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,2.94848863961771,0.245772908753719,0.633936370075881,0,0,0,0,0,0.559518030877778,0.622077260032973,0,0,1.25812753484717,0,0,1.91317428091515,0.991486114072017,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,0.825788063434183,0.917142992608395,1.15525666150338,0,0,0,0.0752103283492573,4.0341013740704,0,0,0,0.887136517302272,0,0,0,0,0,1.64477330057155,0,2.46219742103469,1.91643641459393,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.709163045303809,1.66847102838104,0.235479278551542,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0.691259661814092,0.430227358820278,0,0,1.27016115057279,1.60374807980835,0,0,0.111855431797792,1.27595303699816,0.487671699929078,0,0,0,0,0.701818390386317,0.994753875806841,0.475680363110274,2.03302947670128,0.439762066981716,1.05673990496671,0.308696632431779,0,0.470317296361523,0,0.942706188406504,0.196308467114945,0,0,0,0,0,0,0.71421575442263,1.05868461514708,3.85158560108008,0,0.917458566809082,0,0,0,0,1.0580536810308,0,0,0,0,0,0.126698501011437,0.305966489225945,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.572824424503484,0.202117188958219,0,0.342233301085281,0.13470410602917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| ||
|short_description=p@chr8:95652716..95652741,+ | |short_description=p@chr8:95652716..95652741,+ | ||
}} | }} |
Latest revision as of 20:39, 31 July 2015
Short description: | p@chr8:95652716..95652741, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:95652716..95652741, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.55e-11 | 42 |
epithelial cell of lung | 1.19e-10 | 19 |
epithelial cell | 2.97e-10 | 253 |
endodermal cell | 5.69e-10 | 58 |
respiratory epithelial cell | 8.61e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 3.63e-11 | 37 |
respiratory tract epithelium | 1.19e-10 | 19 |
lung epithelium | 1.19e-10 | 19 |
respiratory system | 1.18e-09 | 74 |
lung | 5.09e-09 | 22 |
respiratory tube | 5.09e-09 | 22 |
respiration organ | 5.09e-09 | 22 |
pair of lungs | 5.09e-09 | 22 |
lung primordium | 5.09e-09 | 22 |
lung bud | 5.09e-09 | 22 |
respiratory system epithelium | 1.03e-08 | 28 |
epithelial fold | 2.93e-08 | 47 |
respiratory tract | 5.04e-08 | 54 |
endoderm-derived structure | 1.66e-07 | 160 |
endoderm | 1.66e-07 | 160 |
presumptive endoderm | 1.66e-07 | 160 |
thoracic cavity element | 9.27e-07 | 34 |
thoracic cavity | 9.27e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.03e-15 | 143 |
squamous cell carcinoma | 4.87e-15 | 14 |
carcinoma | 2.17e-13 | 106 |
respiratory system cancer | 5.72e-13 | 16 |
cancer | 3.32e-12 | 235 |
disease of cellular proliferation | 9.00e-12 | 239 |
lung cancer | 9.23e-11 | 15 |