FFCP PHASE1:Hg19::chr9:131397542..131397587,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:131397542..131397587,- | |||
|coexpression_cluster_id=C326 | |coexpression_cluster_id=C326 | ||
|description=CAGE_peak_at_chr9:131397542..131397587,- | |description=CAGE_peak_at_chr9:131397542..131397587,- | ||
|id=chr9:131397542..131397587,- | |id=chr9:131397542..131397587,- | ||
|ontology_enrichment_celltype=CL:0000066!1.23e-15!254;CL:0002076!6.93e-09!43;CL:0000223!2.87e-08!59;CL:0002368!5.50e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.23e-15!254;CL:0002076!6.93e-09!43;CL:0000223!2.87e-08!59;CL:0002368!5.50e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002202;1.51e-08;9!CL:0002632;1.51e-08;9!CL:0000082;7.22e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.41e-10,253;CL:0002202,1.49e-08,9;CL:0002632,1.49e-08,9;CL:0000082,6.36e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.56e-09;1!UBERON:0000358;2.16e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.37e-30!106;DOID:0050687!1.94e-25!143;DOID:162!2.68e-15!235;DOID:14566!1.39e-14!239;DOID:299!6.16e-14!25 | |ontology_enrichment_disease=DOID:305!1.37e-30!106;DOID:0050687!1.94e-25!143;DOID:162!2.68e-15!235;DOID:14566!1.39e-14!239;DOID:299!6.16e-14!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;7.40e-19;4!DOID:1612;7.40e-19;4!DOID:299;5.85e-15;25!DOID:1325;7.57e-11;7!DOID:3904;7.57e-11;7!DOID:3111;3.98e-09;1!DOID:3603;3.98e-09;1!DOID:305;1.27e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.41e-19,4;DOID:1612,7.41e-19,4;DOID:305,1.72e-16,106;DOID:299,6.18e-15,25;DOID:0050687,1.79e-11,143;DOID:1325,6.73e-11,7;DOID:3904,6.73e-11,7;DOID:3111,3.83e-09,1;DOID:3603,3.83e-09,1;DOID:162,9.61e-07,235 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002110;8.82e-12;3!UBERON:0002294;3.77e-11;7!UBERON:0001173;3.77e-11;7!UBERON:0000310;7.42e-08;10!UBERON:0002075;1.80e-07;18!UBERON:0001443;3.50e-07;11!UBERON:0004802;7.22e-07;19!UBERON:0000115;7.22e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,7.51e-12,3;UBERON:0006242,7.51e-12,3;UBERON:0002294,8.15e-09,9;UBERON:0001173,8.15e-09,9;UBERON:0004912,8.15e-09,9;UBERON:0000915,9.04e-09,52;UBERON:0000310,7.42e-08,10;UBERON:0002075,1.74e-07,18;UBERON:0000072,1.81e-07,47;UBERON:0001443,3.50e-07,11;UBERON:0008947,5.17e-07,38;UBERON:0003258,5.17e-07,38;UBERON:0004802,6.36e-07,19;UBERON:0000115,6.36e-07,19;UBERON:0009569,7.73e-07,112 | |||
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|short_description=p@chr9:131397542..131397587,- | |short_description=p@chr9:131397542..131397587,- | ||
}} | }} |
Latest revision as of 23:15, 31 July 2015
Short description: | p@chr9:131397542..131397587, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:131397542..131397587, - |
Coexpression cluster: | C326_bile_choriocarcinoma_giant_lung_mucinous_glassy_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.41e-10 | 253 |
epithelial cell of tracheobronchial tree | 1.49e-08 | 9 |
epithelial cell of lower respiratory tract | 1.49e-08 | 9 |
epithelial cell of lung | 6.36e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 7.51e-12 | 3 |
gall bladder primordium | 7.51e-12 | 3 |
biliary system | 8.15e-09 | 9 |
biliary tree | 8.15e-09 | 9 |
biliary bud | 8.15e-09 | 9 |
thoracic segment of trunk | 9.04e-09 | 52 |
breast | 7.42e-08 | 10 |
viscus | 1.74e-07 | 18 |
segment of respiratory tract | 1.81e-07 | 47 |
chest | 3.50e-07 | 11 |
respiratory primordium | 5.17e-07 | 38 |
endoderm of foregut | 5.17e-07 | 38 |
respiratory tract epithelium | 6.36e-07 | 19 |
lung epithelium | 6.36e-07 | 19 |
subdivision of trunk | 7.73e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.41e-19 | 4 |
breast cancer | 7.41e-19 | 4 |
carcinoma | 1.72e-16 | 106 |
adenocarcinoma | 6.18e-15 | 25 |
cell type cancer | 1.79e-11 | 143 |
bronchus cancer | 6.73e-11 | 7 |
bronchogenic carcinoma | 6.73e-11 | 7 |
cystadenocarcinoma | 3.83e-09 | 1 |
mucinous cystadenocarcinoma | 3.83e-09 | 1 |
cancer | 9.61e-07 | 235 |