FFCP PHASE1:Hg19::chr9:136739422..136739457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:136739422..136739457,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_at_chr9:136739422..136739457,+ | |description=CAGE_peak_at_chr9:136739422..136739457,+ | ||
|id=chr9:136739422..136739457,+ | |id=chr9:136739422..136739457,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.58e-29!254;CL:0002076!1.50e-20!43;CL:0000223!1.87e-14!59;CL:0002368!6.31e-10!13;CL:0000076!1.45e-08!62;CL:0002327!1.42e-07!4;CL:0002202!2.10e-07!9;CL:0002632!2.10e-07!9;CL:0002251!2.43e-07!21;CL:0002541!7.46e-07!3 | |ontology_enrichment_celltype=CL:0000066!5.58e-29!254;CL:0002076!1.50e-20!43;CL:0000223!1.87e-14!59;CL:0002368!6.31e-10!13;CL:0000076!1.45e-08!62;CL:0002327!1.42e-07!4;CL:0002202!2.10e-07!9;CL:0002632!2.10e-07!9;CL:0002251!2.43e-07!21;CL:0002541!7.46e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.64e-15;19!CL:0002251;6.27e-14;20!CL:0002541;1.77e-11;3!CL:0002623;1.77e-11;3!CL:0002076;8.66e-09;42!CL:0002537;1.32e-07;5!CL:0000622;3.13e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.96e-15,19;CL:0002076,5.45e-14,42;CL:0002251,6.43e-14,20;CL:0000223,4.07e-12,58;CL:0002541,9.32e-12,3;CL:0002623,2.08e-11,3;CL:0002537,1.28e-07,5;CL:0000622,3.45e-07,5;CL:0000066,5.81e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.37e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.70e-21!106;DOID:1749!2.17e-17!14;DOID:0050687!2.29e-17!143;DOID:162!3.91e-11!235;DOID:14566!1.33e-10!239;DOID:5093!6.08e-09!4;DOID:1612!6.08e-09!4 | |ontology_enrichment_disease=DOID:305!1.70e-21!106;DOID:1749!2.17e-17!14;DOID:0050687!2.29e-17!143;DOID:162!3.91e-11!235;DOID:14566!1.33e-10!239;DOID:5093!6.08e-09!4;DOID:1612!6.08e-09!4 | ||
|ontology_enrichment_disease_v019=DOID:178;1.37e-09;1!DOID:326;1.37e-09;1!DOID:3978;1.37e-09;1!DOID:3394;1.37e-09;1!DOID:5844;1.37e-09;1!DOID:5093;2.16e-09;4!DOID:1612;2.16e-09;4!DOID:3151;3.12e-09;1!DOID:3149;3.12e-09;1!DOID:7;4.74e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:178,1.56e-09,1;DOID:326,1.56e-09,1;DOID:3978,1.56e-09,1;DOID:3394,1.56e-09,1;DOID:5844,1.56e-09,1;DOID:7,1.70e-09,39;DOID:5093,2.17e-09,4;DOID:1612,2.17e-09,4;DOID:3151,3.00e-09,1;DOID:3149,3.00e-09,1;DOID:305,8.50e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.74e-16!72;UBERON:0005631!3.26e-15!14;UBERON:0000158!3.26e-15!14;UBERON:0000065!6.58e-15!53;UBERON:0000072!6.61e-14!46;UBERON:0008947!2.43e-13!38;UBERON:0003258!2.43e-13!38;UBERON:0001737!1.47e-12!9;UBERON:0004119!5.21e-12!169;UBERON:0000925!5.21e-12!169;UBERON:0006595!5.21e-12!169;UBERON:0003729!6.61e-10!5;UBERON:0003124!6.82e-10!7;UBERON:0003100!1.03e-09!41;UBERON:0004175!1.87e-09!25;UBERON:0000478!1.95e-09!24;UBERON:0001557!2.00e-09!19;UBERON:0005153!4.77e-09!37;UBERON:0003343!1.67e-08!4;UBERON:0004785!1.67e-08!4;UBERON:0000995!2.71e-08!21;UBERON:0001007!2.98e-08!155;UBERON:0001555!2.98e-08!155;UBERON:0007026!2.98e-08!155;UBERON:0000077!4.88e-08!130;UBERON:0005795!8.34e-08!22;UBERON:0003975!8.34e-08!22;UBERON:0001911!1.42e-07!4;UBERON:0005333!1.42e-07!4;UBERON:0008425!1.42e-07!4;UBERON:0005311!1.42e-07!4;UBERON:0000305!4.40e-07!7;UBERON:0005156!5.61e-07!59;UBERON:0000990!5.61e-07!59;UBERON:0000476!7.46e-07!3;UBERON:0000920!7.46e-07!3 | |ontology_enrichment_uberon=UBERON:0001004!1.74e-16!72;UBERON:0005631!3.26e-15!14;UBERON:0000158!3.26e-15!14;UBERON:0000065!6.58e-15!53;UBERON:0000072!6.61e-14!46;UBERON:0008947!2.43e-13!38;UBERON:0003258!2.43e-13!38;UBERON:0001737!1.47e-12!9;UBERON:0004119!5.21e-12!169;UBERON:0000925!5.21e-12!169;UBERON:0006595!5.21e-12!169;UBERON:0003729!6.61e-10!5;UBERON:0003124!6.82e-10!7;UBERON:0003100!1.03e-09!41;UBERON:0004175!1.87e-09!25;UBERON:0000478!1.95e-09!24;UBERON:0001557!2.00e-09!19;UBERON:0005153!4.77e-09!37;UBERON:0003343!1.67e-08!4;UBERON:0004785!1.67e-08!4;UBERON:0000995!2.71e-08!21;UBERON:0001007!2.98e-08!155;UBERON:0001555!2.98e-08!155;UBERON:0007026!2.98e-08!155;UBERON:0000077!4.88e-08!130;UBERON:0005795!8.34e-08!22;UBERON:0003975!8.34e-08!22;UBERON:0001911!1.42e-07!4;UBERON:0005333!1.42e-07!4;UBERON:0008425!1.42e-07!4;UBERON:0005311!1.42e-07!4;UBERON:0000305!4.40e-07!7;UBERON:0005156!5.61e-07!59;UBERON:0000990!5.61e-07!59;UBERON:0000476!7.46e-07!3;UBERON:0000920!7.46e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.01e-20;10!UBERON:0000158;5.01e-20;10!UBERON:0003343;1.39e-18;4!UBERON:0004785;1.39e-18;4!UBERON:0000478;8.32e-16;24!UBERON:0000974;1.39e-12;6!UBERON:0003124;1.77e-11;3!UBERON:0000920;1.77e-11;3!UBERON:0000305;4.10e-11;7!UBERON:0000161;2.50e-10;19!UBERON:0000166;2.50e-10;19!UBERON:0000165;5.99e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.91e-20,14;UBERON:0000158,1.91e-20,14;UBERON:0003343,1.20e-18,4;UBERON:0004785,1.20e-18,4;UBERON:0000478,7.44e-16,24;UBERON:0000920,9.32e-12,3;UBERON:0003124,4.47e-11,7;UBERON:0000305,5.13e-11,7;UBERON:0004871,1.06e-09,8;UBERON:0000166,6.82e-09,22;UBERON:0004923,1.40e-08,66;UBERON:0000974,8.95e-08,10;UBERON:0001004,2.64e-07,74 | |||
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|short_description=p@chr9:136739422..136739457,+ | |short_description=p@chr9:136739422..136739457,+ | ||
}} | }} |
Latest revision as of 00:00, 1 August 2015
Short description: | p@chr9:136739422..136739457, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:136739422..136739457, + |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.96e-15 | 19 |
endo-epithelial cell | 5.45e-14 | 42 |
epithelial cell of alimentary canal | 6.43e-14 | 20 |
endodermal cell | 4.07e-12 | 58 |
chorionic membrane mesenchymal stem cell | 9.32e-12 | 3 |
acinar cell of salivary gland | 2.08e-11 | 3 |
amnion mesenchymal stem cell | 1.28e-07 | 5 |
acinar cell | 3.45e-07 | 5 |
epithelial cell | 5.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.91e-20 | 14 |
membranous layer | 1.91e-20 | 14 |
mucosa of oral region | 1.20e-18 | 4 |
respiratory system mucosa | 1.20e-18 | 4 |
extraembryonic structure | 7.44e-16 | 24 |
egg chorion | 9.32e-12 | 3 |
chorion | 4.47e-11 | 7 |
amnion | 5.13e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.06e-09 | 8 |
oral opening | 6.82e-09 | 22 |
organ component layer | 1.40e-08 | 66 |
neck | 8.95e-08 | 10 |
respiratory system | 2.64e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.56e-09 | 1 |
ischemia | 1.56e-09 | 1 |
extrinsic cardiomyopathy | 1.56e-09 | 1 |
myocardial ischemia | 1.56e-09 | 1 |
myocardial infarction | 1.56e-09 | 1 |
disease of anatomical entity | 1.70e-09 | 39 |
thoracic cancer | 2.17e-09 | 4 |
breast cancer | 2.17e-09 | 4 |
skin squamous cell carcinoma | 3.00e-09 | 1 |
keratoacanthoma | 3.00e-09 | 1 |
carcinoma | 8.50e-09 | 106 |