FFCP PHASE1:Hg19::chr9:139379206..139379215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:139379206..139379215,- | |||
|coexpression_cluster_id=C1549 | |||
|description=CAGE_peak_at_chr9:139379206..139379215,- | |description=CAGE_peak_at_chr9:139379206..139379215,- | ||
|id=chr9:139379206..139379215,- | |id=chr9:139379206..139379215,- | ||
|ontology_enrichment_celltype=CL:0000066!9.12e-29!254;CL:0000223!4.86e-25!59;CL:0002076!4.82e-23!43;CL:0002159!4.31e-19!13;CL:0000076!7.22e-12!62;CL:0002368!2.53e-10!13;CL:0002251!4.04e-10!21;CL:0000362!8.47e-10!8;CL:0000240!4.60e-09!6;CL:0000311!4.60e-09!6;CL:0000079!4.60e-09!6;CL:0000237!4.60e-09!6;CL:0000036!4.60e-09!6;CL:0000357!4.60e-09!6;CL:0000114!4.60e-09!6;CL:0002166!1.45e-07!3;CL:0002621!1.48e-07!3;CL:0002231!2.00e-07!3;CL:0000312!2.39e-07!5;CL:0002077!4.27e-07!33 | |ontology_enrichment_celltype=CL:0000066!9.12e-29!254;CL:0000223!4.86e-25!59;CL:0002076!4.82e-23!43;CL:0002159!4.31e-19!13;CL:0000076!7.22e-12!62;CL:0002368!2.53e-10!13;CL:0002251!4.04e-10!21;CL:0000362!8.47e-10!8;CL:0000240!4.60e-09!6;CL:0000311!4.60e-09!6;CL:0000079!4.60e-09!6;CL:0000237!4.60e-09!6;CL:0000036!4.60e-09!6;CL:0000357!4.60e-09!6;CL:0000114!4.60e-09!6;CL:0002166!1.45e-07!3;CL:0002621!1.48e-07!3;CL:0002231!2.00e-07!3;CL:0000312!2.39e-07!5;CL:0002077!4.27e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002328;2.78e-16;3!CL:0002368;1.67e-14;13!CL:0000362;2.81e-12;9!CL:0002202;3.35e-12;9!CL:0002632;3.35e-12;9!CL:0000312;3.75e-10;5!CL:0000182;1.69e-09;12!CL:0000240;1.31e-08;6!CL:0000311;1.31e-08;6!CL:0000079;1.31e-08;6!CL:0000237;1.31e-08;6!CL:0002159;4.37e-08;14!CL:0002076;5.89e-08;42!CL:0000317;2.43e-07;2!CL:1000448;2.43e-07;2!CL:0002308;2.43e-07;2!CL:0002140;2.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,3.25e-16,3;CL:0000223,2.57e-15,58;CL:0002368,1.83e-14,13;CL:0000362,2.92e-12,9;CL:0002202,3.83e-12,9;CL:0002632,3.83e-12,9;CL:0000312,3.93e-10,5;CL:0002076,1.19e-09,42;CL:0000182,1.55e-09,12;CL:0000240,1.36e-08,6;CL:0000311,1.36e-08,6;CL:0000079,1.36e-08,6;CL:0000237,1.36e-08,6;CL:0000036,1.36e-08,6;CL:0000357,1.36e-08,6;CL:0000114,1.36e-08,6;CL:0000066,1.90e-08,253;CL:0002159,4.48e-08,14;CL:0000317,2.43e-07,2;CL:1000448,2.43e-07,2;CL:0002308,2.43e-07,2;CL:0002140,2.43e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.54e-13;1!CL:0000223;2.46e-10;58!CL:0000357;1.31e-08;6!CL:0000114;1.31e-08;6 | |||
|ontology_enrichment_disease=DOID:305!1.33e-16!106;DOID:1749!1.68e-15!14;DOID:0050687!1.31e-10!143 | |||
|ontology_enrichment_disease_v019=DOID:5093;8.67e-13;4!DOID:1612;8.67e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.03e-12,4;DOID:1612,1.03e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.50e-22!169;UBERON:0000925!2.50e-22!169;UBERON:0006595!2.50e-22!169;UBERON:0005911!2.21e-21!82;UBERON:0001004!1.27e-17!72;UBERON:0001007!2.85e-17!155;UBERON:0001555!2.85e-17!155;UBERON:0007026!2.85e-17!155;UBERON:0000065!2.86e-14!53;UBERON:0003929!5.24e-13!54;UBERON:0000077!3.42e-12!130;UBERON:0004921!1.86e-11!129;UBERON:0004185!1.86e-11!129;UBERON:0001041!1.27e-10!98;UBERON:0003729!2.03e-10!5;UBERON:0000344!8.51e-10!12;UBERON:0008947!1.27e-09!38;UBERON:0003258!1.27e-09!38;UBERON:0005153!5.23e-09!37;UBERON:0005157!9.01e-09!51;UBERON:0003343!1.18e-08!4;UBERON:0004785!1.18e-08!4;UBERON:0000072!1.75e-08!46;UBERON:0002530!2.69e-08!59;UBERON:0004807!3.05e-08!28;UBERON:0001048!3.78e-08!168;UBERON:0001949!1.48e-07!3;UBERON:0005178!3.80e-07!34;UBERON:0002224!3.80e-07!34;UBERON:0000365!4.75e-07!5;UBERON:0000974!6.01e-07!10;UBERON:0005181!7.32e-07!35;UBERON:0005177!8.17e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.78e-16;3!UBERON:0002031;2.78e-16;3!UBERON:0002365;5.79e-14;31!UBERON:0002330;5.79e-14;31!UBERON:0002107;2.66e-10;19!UBERON:0006925;2.66e-10;19!UBERON:0002185;3.75e-10;5!UBERON:0002423;7.12e-08;25!UBERON:0001003;1.40e-07;15!UBERON:0007376;1.40e-07;15!UBERON:0007196;1.55e-07;15!UBERON:0001558;1.55e-07;15!UBERON:0000485;1.68e-07;7!UBERON:0002419;2.43e-07;2!UBERON:0007771;2.43e-07;2!UBERON:0003297;2.43e-07;2!UBERON:0001821;2.43e-07;2!UBERON:0003487;2.43e-07;2!UBERON:0001820;2.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,3.25e-16,3;UBERON:0002031,3.25e-16,3;UBERON:0002365,1.66e-13,31;UBERON:0002330,1.66e-13,31;UBERON:0002107,2.47e-10,19;UBERON:0006925,2.47e-10,19;UBERON:0008836,2.47e-10,19;UBERON:0002185,4.12e-10,5;UBERON:0002530,2.78e-09,59;UBERON:0008835,5.97e-09,22;UBERON:0003894,5.97e-09,22;UBERON:0009854,1.44e-08,23;UBERON:0005911,2.59e-08,82;UBERON:0007499,6.74e-08,25;UBERON:0009497,6.74e-08,25;UBERON:0000015,6.74e-08,25;UBERON:0002423,6.74e-08,25;UBERON:0006235,6.74e-08,25;UBERON:0004161,6.74e-08,25;UBERON:0009856,1.34e-07,26;UBERON:0001003,1.43e-07,15;UBERON:0007376,1.43e-07,15;UBERON:0007383,1.43e-07,15;UBERON:0007196,1.68e-07,15;UBERON:0001558,1.68e-07,15;UBERON:0009569,2.02e-07,112;UBERON:0004119,2.36e-07,160;UBERON:0000925,2.36e-07,160;UBERON:0006595,2.36e-07,160;UBERON:0002419,2.43e-07,2;UBERON:0007771,2.43e-07,2;UBERON:0003297,2.43e-07,2;UBERON:0001821,2.43e-07,2;UBERON:0003487,2.43e-07,2;UBERON:0001820,2.43e-07,2;UBERON:0005089,2.43e-07,2;UBERON:0005088,2.43e-07,2 | |||
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|short_description=p@chr9:139379206..139379215,- | |short_description=p@chr9:139379206..139379215,- | ||
}} | }} |
Latest revision as of 00:19, 1 August 2015
Short description: | p@chr9:139379206..139379215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:139379206..139379215, - |
Coexpression cluster: | C1549_breast_liver_Sebocyte_Hepatocyte_pancreas_Bronchial_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 3.25e-16 | 3 |
endodermal cell | 2.57e-15 | 58 |
respiratory epithelial cell | 1.83e-14 | 13 |
epidermal cell | 2.92e-12 | 9 |
epithelial cell of tracheobronchial tree | 3.83e-12 | 9 |
epithelial cell of lower respiratory tract | 3.83e-12 | 9 |
keratinocyte | 3.93e-10 | 5 |
endo-epithelial cell | 1.19e-09 | 42 |
hepatocyte | 1.55e-09 | 12 |
stratified squamous epithelial cell | 1.36e-08 | 6 |
keratin accumulating cell | 1.36e-08 | 6 |
stratified epithelial cell | 1.36e-08 | 6 |
keratinizing barrier epithelial cell | 1.36e-08 | 6 |
epithelial fate stem cell | 1.36e-08 | 6 |
stratified epithelial stem cell | 1.36e-08 | 6 |
surface ectodermal cell | 1.36e-08 | 6 |
epithelial cell | 1.90e-08 | 253 |
general ecto-epithelial cell | 4.48e-08 | 14 |
sebum secreting cell | 2.43e-07 | 2 |
epithelial cell of sweat gland | 2.43e-07 | 2 |
epithelial cell of skin gland | 2.43e-07 | 2 |
acinar cell of sebaceous gland | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.03e-12 | 4 |
breast cancer | 1.03e-12 | 4 |