FFCP PHASE1:Hg19::chr9:72117981..72117988,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:72117981..72117988,- | |||
|description=CAGE_peak_at_chr9:72117981..72117988,- | |description=CAGE_peak_at_chr9:72117981..72117988,- | ||
|id=chr9:72117981..72117988,- | |id=chr9:72117981..72117988,- | ||
|ontology_enrichment_celltype=CL:0000071!2.61e-46!18;CL:0002546!2.61e-46!18;CL:0002139!1.10e-43!24;CL:0000115!1.02e-29!35;CL:1000413!3.10e-24!9;CL:0002078!1.80e-23!44;CL:0002543!3.16e-20!6;CL:0002618!2.12e-18!3;CL:0000213!6.38e-18!57;CL:0000215!6.38e-18!57;CL:0002127!4.73e-15!1;CL:0000914!4.73e-15!1;CL:0000911!4.73e-15!1;CL:0000814!4.73e-15!1;CL:0002042!4.73e-15!1;CL:0002039!4.73e-15!1;CL:0002040!4.73e-15!1;CL:0002041!4.73e-15!1;CL:0000076!5.58e-13!62;CL:0002544!4.97e-10!6;CL:0000893!3.56e-08!2;CL:0002489!3.56e-08!2;CL:0000809!3.56e-08!2;CL:0000808!3.56e-08!2;CL:0000894!3.56e-08!2;CL:0000806!3.56e-08!2;CL:0000807!3.56e-08!2;CL:0000805!3.56e-08!2;CL:0002425!3.56e-08!2;CL:0000222!4.44e-08!119 | |ontology_enrichment_celltype=CL:0000071!2.61e-46!18;CL:0002546!2.61e-46!18;CL:0002139!1.10e-43!24;CL:0000115!1.02e-29!35;CL:1000413!3.10e-24!9;CL:0002078!1.80e-23!44;CL:0002543!3.16e-20!6;CL:0002618!2.12e-18!3;CL:0000213!6.38e-18!57;CL:0000215!6.38e-18!57;CL:0002127!4.73e-15!1;CL:0000914!4.73e-15!1;CL:0000911!4.73e-15!1;CL:0000814!4.73e-15!1;CL:0002042!4.73e-15!1;CL:0002039!4.73e-15!1;CL:0002040!4.73e-15!1;CL:0002041!4.73e-15!1;CL:0000076!5.58e-13!62;CL:0002544!4.97e-10!6;CL:0000893!3.56e-08!2;CL:0002489!3.56e-08!2;CL:0000809!3.56e-08!2;CL:0000808!3.56e-08!2;CL:0000894!3.56e-08!2;CL:0000806!3.56e-08!2;CL:0000807!3.56e-08!2;CL:0000805!3.56e-08!2;CL:0002425!3.56e-08!2;CL:0000222!4.44e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.55e-98;1!CL:0000911;1.55e-98;1!CL:0000814;1.55e-98;1!CL:0002544;8.34e-18;6!CL:1000413;2.31e-12;9!CL:0000791;7.39e-07;18!CL:0000789;7.39e-07;18!CL:0002419;7.39e-07;18!CL:0000071;7.39e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,9.37e-99,1;CL:0000914,9.37e-99,1;CL:0000911,9.37e-99,1;CL:0000814,9.37e-99,1;CL:0002042,9.37e-99,1;CL:0002039,9.37e-99,1;CL:0002040,9.37e-99,1;CL:0002041,9.37e-99,1;CL:0000893,2.74e-50,2;CL:0002489,2.74e-50,2;CL:0000809,2.74e-50,2;CL:0000808,2.74e-50,2;CL:0000894,2.74e-50,2;CL:0000806,2.74e-50,2;CL:0000807,2.74e-50,2;CL:0000805,2.74e-50,2;CL:0002425,2.74e-50,2;CL:0002544,9.07e-18,6;CL:1000413,2.45e-12,9;CL:0000791,7.18e-07,18;CL:0000789,7.18e-07,18;CL:0002420,7.18e-07,18;CL:0002419,7.18e-07,18;CL:0000790,7.18e-07,18;CL:0000071,7.60e-07,18;CL:0002546,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;3.52e-50;2!CL:0002546;7.39e-07;18!CL:0000790;7.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.61e-46!18;UBERON:0004638!2.61e-46!18;UBERON:0004852!2.61e-46!18;UBERON:0000487!8.56e-38!22;UBERON:0006914!3.43e-33!25;UBERON:0003915!3.10e-24!9;UBERON:0004700!3.10e-24!9;UBERON:0001917!3.10e-24!9;UBERON:0000055!1.20e-14!69;UBERON:0001638!1.04e-13!9;UBERON:0003920!1.04e-13!9;UBERON:0004582!1.04e-13!9;UBERON:0001981!1.95e-13!60;UBERON:0007500!1.95e-13!60;UBERON:0004537!1.95e-13!60;UBERON:0006965!1.95e-13!60;UBERON:0002049!1.13e-12!79;UBERON:0007798!1.13e-12!79;UBERON:0002066!1.95e-11!5;UBERON:0004872!2.24e-09!84;UBERON:0004535!7.99e-09!110;UBERON:0001009!1.46e-08!113;UBERON:0000490!7.43e-07!138 | |ontology_enrichment_uberon=UBERON:0001986!2.61e-46!18;UBERON:0004638!2.61e-46!18;UBERON:0004852!2.61e-46!18;UBERON:0000487!8.56e-38!22;UBERON:0006914!3.43e-33!25;UBERON:0003915!3.10e-24!9;UBERON:0004700!3.10e-24!9;UBERON:0001917!3.10e-24!9;UBERON:0000055!1.20e-14!69;UBERON:0001638!1.04e-13!9;UBERON:0003920!1.04e-13!9;UBERON:0004582!1.04e-13!9;UBERON:0001981!1.95e-13!60;UBERON:0007500!1.95e-13!60;UBERON:0004537!1.95e-13!60;UBERON:0006965!1.95e-13!60;UBERON:0002049!1.13e-12!79;UBERON:0007798!1.13e-12!79;UBERON:0002066!1.95e-11!5;UBERON:0004872!2.24e-09!84;UBERON:0004535!7.99e-09!110;UBERON:0001009!1.46e-08!113;UBERON:0000490!7.43e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0003915;2.31e-12;9!UBERON:0004700;2.31e-12;9!UBERON:0001917;2.31e-12;9!UBERON:0004638;7.39e-07;18!UBERON:0001986;7.39e-07;18!UBERON:0004852;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0003915,2.45e-12,9;UBERON:0004700,2.45e-12,9;UBERON:0001917,2.45e-12,9;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18;UBERON:0004638,7.60e-07,18;UBERON:0001986,7.60e-07,18;UBERON:0004852,7.60e-07,18 | |||
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|short_description=p@chr9:72117981..72117988,- | |short_description=p@chr9:72117981..72117988,- | ||
}} | }} |
Latest revision as of 02:26, 1 August 2015
Short description: | p@chr9:72117981..72117988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:72117981..72117988, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 9.37e-99 | 1 |
immature NK T cell | 9.37e-99 | 1 |
effector T cell | 9.37e-99 | 1 |
mature NK T cell | 9.37e-99 | 1 |
immature NK T cell stage IV | 9.37e-99 | 1 |
immature NK T cell stage I | 9.37e-99 | 1 |
immature NK T cell stage II | 9.37e-99 | 1 |
immature NK T cell stage III | 9.37e-99 | 1 |
thymocyte | 2.74e-50 | 2 |
double negative thymocyte | 2.74e-50 | 2 |
double-positive, alpha-beta thymocyte | 2.74e-50 | 2 |
DN4 thymocyte | 2.74e-50 | 2 |
DN1 thymic pro-T cell | 2.74e-50 | 2 |
DN2 thymocyte | 2.74e-50 | 2 |
DN3 thymocyte | 2.74e-50 | 2 |
immature single positive thymocyte | 2.74e-50 | 2 |
early T lineage precursor | 2.74e-50 | 2 |
aortic endothelial cell | 9.07e-18 | 6 |
endothelial cell of artery | 2.45e-12 | 9 |
mature alpha-beta T cell | 7.18e-07 | 18 |
alpha-beta T cell | 7.18e-07 | 18 |
immature T cell | 7.18e-07 | 18 |
mature T cell | 7.18e-07 | 18 |
immature alpha-beta T cell | 7.18e-07 | 18 |
blood vessel endothelial cell | 7.60e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
endothelial tube | 2.45e-12 | 9 |
arterial system endothelium | 2.45e-12 | 9 |
endothelium of artery | 2.45e-12 | 9 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |
blood vessel endothelium | 7.60e-07 | 18 |
endothelium | 7.60e-07 | 18 |
cardiovascular system endothelium | 7.60e-07 | 18 |