FFCP PHASE1:Hg19::chr9:93195809..93195841,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:93195809..93195841,- to FFCP PHASE1:Hg19::chr9:93195809..93195841,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_ENST00000436671_5end | |||
|cluster_id=chr9:93195809..93195841,- | |||
|description=CAGE_peak_1_at_ENST00000436671_5end | |||
|id=chr9:93195809..93195841,- | |||
|ontology_enrichment_celltype=CL:0000066!5.40e-14!254;CL:1000497!2.43e-11!18;CL:0002518!2.43e-11!18;CL:1000507!1.51e-09!12;CL:1000494!1.51e-09!12;CL:1000449!2.86e-09!16;CL:0000128!7.12e-07!7;CL:0000126!7.12e-07!7;CL:0000127!7.12e-07!7;CL:0002453!7.12e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.51e-22;10!CL:1000494;2.51e-22;10!CL:1000497;4.18e-21;17!CL:0002518;4.18e-21;17!CL:1000449;5.92e-17;15!CL:0002681;1.44e-11;12!CL:0002584;1.44e-11;12!CL:0000064;1.28e-08;3!CL:0000067;1.28e-08;3!CL:0005012;1.28e-08;3!CL:0002304;1.28e-08;3!CL:0000239;1.26e-07;3!CL:1000615;1.26e-07;3!CL:0002306;1.26e-07;3!CL:0000128;2.38e-07;7!CL:0000126;2.38e-07;7!CL:0000127;2.38e-07;7!CL:0000708;3.10e-07;3!CL:0002603;5.46e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.26e-22,10;CL:1000494,2.26e-22,10;CL:1000497,3.64e-21,17;CL:0002518,3.64e-21,17;CL:1000449,5.19e-17,15;CL:0000066,5.03e-12,253;CL:0002681,1.31e-11,12;CL:0002584,1.31e-11,12;CL:0000064,1.28e-08,3;CL:0000067,1.28e-08,3;CL:0005012,1.28e-08,3;CL:0002304,1.28e-08,3;CL:0000239,1.14e-07,3;CL:1000615,1.14e-07,3;CL:0002306,1.14e-07,3;CL:0000128,2.58e-07,7;CL:0000126,2.58e-07,7;CL:0000127,2.58e-07,7;CL:0002453,2.58e-07,7;CL:0000708,3.62e-07,3;CL:0002603,8.37e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.23e-07;10!UBERON:0007687;1.23e-07;10 | |||
|ontology_enrichment_disease=DOID:305!1.66e-13!106;DOID:0050687!3.87e-12!143;DOID:299!1.42e-08!25;DOID:162!1.87e-07!235;DOID:14566!6.53e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;1.04e-12;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.15e-12,25;DOID:305,2.39e-12,106;DOID:0050687,6.58e-11,143;DOID:162,5.24e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.36e-14!365;UBERON:0002113!3.64e-12!27;UBERON:0003918!3.64e-12!27;UBERON:0005095!3.64e-12!27;UBERON:0007687!3.64e-12!27;UBERON:0000058!3.99e-12!26;UBERON:0000481!3.29e-11!347;UBERON:0000489!3.60e-11!32;UBERON:0000153!1.75e-10!129;UBERON:0007811!1.75e-10!129;UBERON:0000033!2.49e-10!123;UBERON:0005177!2.94e-10!107;UBERON:0006555!5.72e-10!17;UBERON:0005103!5.72e-10!17;UBERON:0000083!5.72e-10!17;UBERON:0009201!5.72e-10!17;UBERON:0004819!5.72e-10!17;UBERON:0006553!5.72e-10!17;UBERON:0003074!5.72e-10!17;UBERON:0003060!5.72e-10!17;UBERON:0000064!1.15e-09!219;UBERON:0002346!1.15e-09!90;UBERON:0009773!1.51e-09!12;UBERON:0001231!1.51e-09!12;UBERON:0004810!1.51e-09!12;UBERON:0003075!2.60e-09!86;UBERON:0007284!2.60e-09!86;UBERON:0004211!2.86e-09!16;UBERON:0001285!2.86e-09!16;UBERON:0007684!2.86e-09!16;UBERON:0003220!2.86e-09!16;UBERON:0004208!2.86e-09!16;UBERON:0005743!3.49e-09!86;UBERON:0000080!3.58e-09!18;UBERON:0002120!3.58e-09!18;UBERON:0004875!3.58e-09!18;UBERON:0005721!3.58e-09!18;UBERON:0005754!3.58e-09!18;UBERON:0007297!3.58e-09!18;UBERON:0000119!3.99e-09!312;UBERON:0000924!4.07e-09!173;UBERON:0006601!4.07e-09!173;UBERON:0000073!6.63e-09!94;UBERON:0001016!6.63e-09!94;UBERON:0000466!7.62e-09!126;UBERON:0000464!7.64e-09!104;UBERON:0005172!8.02e-09!55;UBERON:0005173!8.02e-09!55;UBERON:0000062!8.52e-09!511;UBERON:0004121!9.32e-09!169;UBERON:0009569!1.47e-08!113;UBERON:0002417!1.60e-08!61;UBERON:0000916!1.60e-08!61;UBERON:0006554!1.65e-08!44;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0003887!3.06e-08!21;UBERON:0007625!3.26e-08!11;UBERON:0001017!3.48e-08!82;UBERON:0001008!3.70e-08!45;UBERON:0000483!4.29e-08!309;UBERON:0004876!7.80e-08!20;UBERON:0000970!1.96e-07!20;UBERON:0003886!3.35e-07!63;UBERON:0002616!5.57e-07!59;UBERON:0002104!6.81e-07!21;UBERON:0002553!6.84e-07!70;UBERON:0004733!6.89e-07!12;UBERON:0002028!6.89e-07!12;UBERON:0007277!6.89e-07!12;UBERON:0000063!7.09e-07!97;UBERON:0001456!7.95e-07!21;UBERON:0002037!8.34e-07!6;UBERON:0006215!8.34e-07!6;UBERON:0000019!9.04e-07!19;UBERON:0000047!9.04e-07!19;UBERON:0004088!9.04e-07!19;UBERON:0003072!9.04e-07!19;UBERON:0003071!9.04e-07!19;UBERON:0004128!9.04e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;6.70e-24;24!UBERON:0011143;6.70e-24;24!UBERON:0004211;2.51e-22;10!UBERON:0009773;2.51e-22;10!UBERON:0001231;2.51e-22;10!UBERON:0004810;2.51e-22;10!UBERON:0000489;6.07e-19;29!UBERON:0006554;3.75e-18;30!UBERON:0001008;3.75e-18;30!UBERON:0006555;5.92e-17;15!UBERON:0004819;5.92e-17;15!UBERON:0001285;5.92e-17;15!UBERON:0007684;5.92e-17;15!UBERON:0002037;7.37e-12;6!UBERON:0001225;1.44e-11;12!UBERON:0008987;1.44e-11;12!UBERON:0000488;9.36e-11;4!UBERON:0007625;1.44e-10;11!UBERON:0000970;4.78e-10;20!UBERON:0002104;1.85e-09;21!UBERON:0005172;6.11e-09;52!UBERON:0005173;6.11e-09;52!UBERON:0001851;6.22e-09;15!UBERON:0000353;6.22e-09;15!UBERON:0000019;8.04e-09;19!UBERON:0000047;8.04e-09;19!UBERON:0004088;8.04e-09;19!UBERON:0010230;8.04e-09;19!UBERON:0001778;1.28e-08;3!UBERON:0001775;1.28e-08;3!UBERON:0000020;1.93e-08;23!UBERON:0001801;5.10e-08;14!UBERON:0001032;5.35e-08;24!UBERON:0004456;5.35e-08;24!UBERON:0001456;8.50e-08;21!UBERON:0002680;1.12e-07;9!UBERON:0001895;1.12e-07;9!UBERON:0006853;1.26e-07;3!UBERON:0007685;1.26e-07;3!UBERON:0004134;1.26e-07;3!UBERON:0003210;3.10e-07;3!UBERON:0002203;4.14e-07;6!UBERON:0001768;4.14e-07;6!UBERON:0002200;4.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.26e-22,10;UBERON:0002113,1.09e-21,26;UBERON:0003918,1.09e-21,26;UBERON:0011143,1.09e-21,26;UBERON:0005095,1.09e-21,26;UBERON:0007687,1.09e-21,26;UBERON:0000489,2.05e-17,31;UBERON:0004211,5.19e-17,15;UBERON:0009773,5.19e-17,15;UBERON:0001231,5.19e-17,15;UBERON:0001285,5.19e-17,15;UBERON:0007684,5.19e-17,15;UBERON:0004208,5.19e-17,15;UBERON:0006555,8.93e-16,16;UBERON:0004819,8.93e-16,16;UBERON:0005172,5.34e-12,54;UBERON:0005173,5.34e-12,54;UBERON:0002037,6.81e-12,6;UBERON:0006215,6.81e-12,6;UBERON:0001225,1.31e-11,12;UBERON:0008987,1.31e-11,12;UBERON:0005177,2.81e-11,101;UBERON:0006554,3.52e-11,47;UBERON:0001008,7.54e-11,48;UBERON:0000488,9.28e-11,4;UBERON:0007625,1.46e-10,11;UBERON:0002417,2.86e-10,60;UBERON:0000916,2.86e-10,60;UBERON:0009569,1.80e-09,112;UBERON:0000970,2.14e-09,21;UBERON:0002104,2.14e-09,21;UBERON:0001851,5.76e-09,15;UBERON:0000353,5.76e-09,15;UBERON:0001778,1.28e-08,3;UBERON:0001775,1.28e-08,3;UBERON:0000019,2.89e-08,20;UBERON:0000047,2.89e-08,20;UBERON:0010312,2.89e-08,20;UBERON:0004088,2.89e-08,20;UBERON:0010230,2.89e-08,20;UBERON:0003072,2.89e-08,20;UBERON:0004128,2.89e-08,20;UBERON:0003071,2.89e-08,20;UBERON:0001801,5.16e-08,14;UBERON:0000020,6.07e-08,24;UBERON:0001032,6.07e-08,24;UBERON:0004456,6.07e-08,24;UBERON:0002680,1.06e-07,9;UBERON:0001895,1.06e-07,9;UBERON:0010092,1.06e-07,9;UBERON:0006853,1.14e-07,3;UBERON:0007685,1.14e-07,3;UBERON:0004134,1.14e-07,3;UBERON:0001456,2.43e-07,22;UBERON:0003210,3.62e-07,3;UBERON:0002203,4.11e-07,6;UBERON:0001768,4.11e-07,6;UBERON:0002200,4.11e-07,6;UBERON:0005085,7.20e-07,31 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,7.26414242653049,1.02000345622126,1.25381888591235,2.57612388417951,1.91624195102038,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,29.305793320861,31.2638450422215,17.5669571386252,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,8.7499583252248,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,10.1031939417691,53.7917079084356,7.16193034838512,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01835951821649,3.05172048183296,2.933531432838,0,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0,0,1.48418066444991,0,0,0,0,0,0.241718899183244,0,0,0,0.182091168006717,0,8.57279264524082,11.7833465769755,5.49044838423799,1.46139224653261,33.2487631012558,0,0,2.59099099322567,0,10.2959646266664,12.0405545725165,6.626783099171,1.66215201785745,18.1338551324964,0,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60510858551767,0.949138274156178,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36277837387947,0,0,0,7.10340367016033,0.23874448473769,0,0,0.994147647766298,0,0.556543525114529,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,2.50629644545853,0,0,0,0,0,0,0,9.11497163798316,0,0,1.82069517256799,10.9329069625889,3.07303986298317,0,0.291604613383254,0,0,0,1.52581736317083,1.99042667876204,1.77328571372128,0.658156191461918,0,1.81250867562184,0.846452843541768,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2424606119361,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,15.261840276703,0,0,0,0,0.126373159256976,2.40517471063188,1.45163467956146,0.664653872707185,0,1.2557316736289,0,9.67672456501295,0,10.2400245617727,0.489961987071888,0.174118413160805,0.698906672968121,0,0,0,0,0,0,1.12990370390266,0,0,0,6.6487470129833,0.561111741760736,0.426905989478705,0,0,0,0,0,0.49701014226173,0,0.271808412147228,0.418411385249333,0.407992870545287,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,3.49487848582361,0,0,0,57.6785041676428,0,0,0,0.482259445395058,0,0,0,0,0.121499113316049,1.34173875039706,2.36417121897595,2.25554728980492,0.105600336519406,12.5501137532991,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0.342173675768659,3.52407511158336,0.427149650270779,0.314408610199332,0,0,0,0,33.1937454040495,0,0,0,0,1.09937867375164,0,0.122026264901963,0.250381861413,0.573409195690071,0.443716206147409,0.124192805882767,3.597064508342,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.857766365499703,1.82696004375648,0.906823702049089,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0.530067437837643,0,0,6.91852100187456,18.3078081117535,4.25403938648335,0,0,0,0,0,15.9752390689918,0,0,0,0,0,0,0,0,1.79052119825112,0.107824811396682,0.157265941855896,0,0.169732529954025,0,2.10690799240304,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.484426936895553,0,5.29997679905538,1.76954585021611,0.733714394086716,0,0,0,3.77940822020922,0.150420656698515,0,0,0,0,1.47856086217045,0.202612753855184,0,0,0,0,0.548257766857182,0,0,2.93853583571069,1.60710550763486,0.336283722218824,1.21393120847326,0.227662191351298,0.0887023701626388,0,0,0,0.0657727735628491,1.18193840883968,0,0.078493092850514,0,0.560544326627578,0,25.6953833550159,15.2880540123856,1.21510125100316,3.79232668158544,3.60348418641188,3.65102371835417,0,0,0,0,0,0,0,0,6.18588545068935,0.93061915699296,0.955538938977433,1.4541206133713,0,0,0,0,0,0,0,0,0.118920090777569,0.11294608203896,0,0,0.694567422971502,0.218559560503957,0,0,0.471353094203252,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.437062287854782,0,0.101988829741982,0.801652215796681,1.10273879441814,0.50141507858475,0,0,0,0.103432995861895,2.13233981900981,3.57096647195611,0,0,0,3.88247665496806,5.45716410187192,0,0,0.0673520530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| ||
|short_description=p1@ENST00000436671 | |||
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Latest revision as of 03:25, 1 August 2015
Short description: | p1@ENST00000436671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000436671_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000436671_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.26e-22 | 10 |
nephron tubule epithelial cell | 2.26e-22 | 10 |
kidney cell | 3.64e-21 | 17 |
kidney epithelial cell | 3.64e-21 | 17 |
epithelial cell of nephron | 5.19e-17 | 15 |
epithelial cell | 5.03e-12 | 253 |
kidney cortical cell | 1.31e-11 | 12 |
renal cortical epithelial cell | 1.31e-11 | 12 |
ciliated cell | 1.28e-08 | 3 |
ciliated epithelial cell | 1.28e-08 | 3 |
multi-ciliated epithelial cell | 1.28e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.28e-08 | 3 |
brush border epithelial cell | 1.14e-07 | 3 |
kidney cortex tubule cell | 1.14e-07 | 3 |
epithelial cell of proximal tubule | 1.14e-07 | 3 |
oligodendrocyte | 2.58e-07 | 7 |
macroglial cell | 2.58e-07 | 7 |
astrocyte | 2.58e-07 | 7 |
oligodendrocyte precursor cell | 2.58e-07 | 7 |
leptomeningeal cell | 3.62e-07 | 3 |
astrocyte of the cerebellum | 8.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.15e-12 | 25 |
carcinoma | 2.39e-12 | 106 |
cell type cancer | 6.58e-11 | 143 |
cancer | 5.24e-07 | 235 |