FFCP PHASE1:Hg19::chr9:93925545..93925568,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-176bp_to_ENST00000457976_5end | |association_with_transcript=-176bp_to_ENST00000457976_5end | ||
|cluster_id=chr9:93925545..93925568,- | |||
|coexpression_cluster_id=C4834 | |||
|description=CAGE_peak_1_at_ENST00000457976_5end | |description=CAGE_peak_1_at_ENST00000457976_5end | ||
|id=chr9:93925545..93925568,- | |id=chr9:93925545..93925568,- | ||
|ontology_enrichment_celltype=CL:0000084!1.80e-14!25;CL:0000827!1.80e-14!25;CL:0000625!2.76e-14!11;CL:0000791!2.72e-12!18;CL:0000789!2.72e-12!18;CL:0002420!2.72e-12!18;CL:0002419!2.72e-12!18;CL:0000790!2.72e-12!18;CL:0000838!5.96e-12!52;CL:0000037!7.39e-12!172;CL:0000566!7.39e-12!172;CL:0000542!1.50e-11!53;CL:0000051!1.50e-11!53;CL:0000738!7.28e-11!140;CL:0002032!1.64e-10!165;CL:0000837!1.64e-10!165;CL:0000988!3.38e-10!182;CL:0002087!4.46e-10!119;CL:0002031!3.45e-08!124 | |ontology_enrichment_celltype=CL:0000084!1.80e-14!25;CL:0000827!1.80e-14!25;CL:0000625!2.76e-14!11;CL:0000791!2.72e-12!18;CL:0000789!2.72e-12!18;CL:0002420!2.72e-12!18;CL:0002419!2.72e-12!18;CL:0000790!2.72e-12!18;CL:0000838!5.96e-12!52;CL:0000037!7.39e-12!172;CL:0000566!7.39e-12!172;CL:0000542!1.50e-11!53;CL:0000051!1.50e-11!53;CL:0000738!7.28e-11!140;CL:0002032!1.64e-10!165;CL:0000837!1.64e-10!165;CL:0000988!3.38e-10!182;CL:0002087!4.46e-10!119;CL:0002031!3.45e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000625;5.86e-28;11!CL:0000791;9.32e-20;18!CL:0000789;9.32e-20;18!CL:0002419;9.32e-20;18!CL:0000084;3.81e-19;25!CL:0000623;6.40e-11;3!CL:0002567;9.07e-10;3!CL:0002619;2.04e-09;3!CL:0000542;4.89e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.89e-28,11;CL:0000791,1.05e-19,18;CL:0000789,1.05e-19,18;CL:0002420,1.05e-19,18;CL:0002419,1.05e-19,18;CL:0000790,1.05e-19,18;CL:0000084,4.01e-19,25;CL:0000827,4.01e-19,25;CL:0000838,7.97e-14,52;CL:0000542,1.76e-13,53;CL:0000051,1.76e-13,53;CL:0000623,6.21e-11,3;CL:0000825,6.21e-11,3;CL:0000037,9.84e-11,168;CL:0002087,1.68e-10,115;CL:0002567,6.60e-10,3;CL:0000738,8.34e-10,136;CL:0000988,8.46e-10,177;CL:0002032,1.17e-09,161;CL:0000837,1.17e-09,161;CL:0002619,1.69e-09,3;CL:0002031,6.54e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;9.32e-20;18!CL:0000051;4.89e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.68e-12!115;UBERON:0000178!8.57e-09!15;UBERON:0000179!8.57e-09!15;UBERON:0000463!8.57e-09!15 | |ontology_enrichment_uberon=UBERON:0007023!4.68e-12!115;UBERON:0000178!8.57e-09!15;UBERON:0000179!8.57e-09!15;UBERON:0000463!8.57e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.24e-15;15!UBERON:0000179;5.24e-15;15!UBERON:0000463;5.24e-15;15!UBERON:0002390;1.91e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.45e-15,15;UBERON:0000179,4.45e-15,15;UBERON:0000463,4.45e-15,15 | |||
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|short_description=p1@ENST00000457976 | |short_description=p1@ENST00000457976 | ||
}} | }} |
Latest revision as of 03:27, 1 August 2015
Short description: | p1@ENST00000457976 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000457976_5end |
Coexpression cluster: | C4834_CD4_non_acute_Natural_CD14_mycosis_CD8 |
Association with transcript: | -176bp_to_ENST00000457976_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.89e-28 | 11 |
mature alpha-beta T cell | 1.05e-19 | 18 |
alpha-beta T cell | 1.05e-19 | 18 |
immature T cell | 1.05e-19 | 18 |
mature T cell | 1.05e-19 | 18 |
immature alpha-beta T cell | 1.05e-19 | 18 |
T cell | 4.01e-19 | 25 |
pro-T cell | 4.01e-19 | 25 |
lymphoid lineage restricted progenitor cell | 7.97e-14 | 52 |
lymphocyte | 1.76e-13 | 53 |
common lymphoid progenitor | 1.76e-13 | 53 |
natural killer cell | 6.21e-11 | 3 |
pro-NK cell | 6.21e-11 | 3 |
hematopoietic stem cell | 9.84e-11 | 168 |
nongranular leukocyte | 1.68e-10 | 115 |
light melanocyte | 6.60e-10 | 3 |
leukocyte | 8.34e-10 | 136 |
hematopoietic cell | 8.46e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.17e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-09 | 161 |
adult endothelial progenitor cell | 1.69e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 6.54e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 4.45e-15 | 15 |
haemolymphatic fluid | 4.45e-15 | 15 |
organism substance | 4.45e-15 | 15 |