FFCP PHASE1:Hg19::chrX:13446901..13446908,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:13446901..13446908,+
|short_description=p@chrX:13446901..13446908,+
|description=CAGE_peak_at_chrX:13446901..13446908,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:13446901..13446908,+ | |||
|description=CAGE_peak_at_chrX:13446901..13446908,+ | |||
|id=chrX:13446901..13446908,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.01e-22!180;CL:0002371!1.54e-15!591;CL:0000144!1.12e-14!625;CL:0000057!6.39e-14!75;CL:0000680!4.29e-12!57;CL:0000056!4.29e-12!57;CL:0000355!4.29e-12!57;CL:0000548!8.06e-12!679;CL:0000004!8.06e-12!679;CL:0000255!8.06e-12!679;CL:0000012!1.44e-11!682;CL:0000220!9.42e-11!246;CL:0002321!1.69e-10!248;CL:0000183!4.99e-10!59;CL:0000187!6.09e-10!54;CL:0002620!2.34e-09!23;CL:0000188!5.02e-09!9;CL:0000003!7.23e-09!722;CL:0002540!1.41e-08!6;CL:0000393!3.57e-08!60;CL:0000211!3.57e-08!60;CL:0002551!6.05e-08!6;CL:0000222!2.15e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000064;5.18e-17;3!CL:0000067;5.18e-17;3!CL:0005012;5.18e-17;3!CL:0002304;5.18e-17;3!CL:0002540;8.71e-15;6!CL:0000188;7.39e-10;9!CL:0002092;6.55e-09;10!CL:0000708;6.70e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.03e-17,3;CL:0000067,3.03e-17,3;CL:0005012,3.03e-17,3;CL:0002304,3.03e-17,3;CL:0002540,6.14e-15,6;CL:0000188,4.83e-10,9;CL:0002092,5.34e-09,10;CL:0000708,9.52e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.54e-17!83;UBERON:0002329!6.54e-17!83;UBERON:0003077!6.54e-17!83;UBERON:0003059!6.54e-17!83;UBERON:0007282!6.54e-17!83;UBERON:0009618!6.54e-17!83;UBERON:0007285!6.54e-17!83;UBERON:0000486!2.63e-16!82;UBERON:0004290!4.99e-15!70;UBERON:0001134!1.06e-10!61;UBERON:0002036!1.06e-10!61;UBERON:0003082!1.06e-10!61;UBERON:0002385!4.43e-10!63;UBERON:0001015!4.43e-10!63;UBERON:0000383!4.43e-10!63;UBERON:0002200!1.76e-09!11;UBERON:0006876!1.76e-09!11;UBERON:0000119!2.62e-09!312;UBERON:0000475!7.75e-09!365;UBERON:0005256!2.27e-08!143;UBERON:0000483!3.57e-08!309;UBERON:0002049!1.87e-07!79;UBERON:0007798!1.87e-07!79;UBERON:0002199!3.71e-07!45;UBERON:0002416!3.71e-07!45;UBERON:0003102!4.78e-07!95;UBERON:0000481!4.91e-07!347;UBERON:0002097!7.80e-07!40;UBERON:0002067!8.80e-07!9;UBERON:0004016!8.80e-07!9;UBERON:0010083!8.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;5.18e-17;3!UBERON:0001775;5.18e-17;3!UBERON:0002203;1.28e-14;6!UBERON:0001768;1.28e-14;6!UBERON:0002200;1.28e-14;6!UBERON:0000488;6.86e-13;4!UBERON:0006876;5.14e-12;11!UBERON:0001134;3.13e-08;16!UBERON:0002036;3.13e-08;16!UBERON:0003210;6.70e-08;3!UBERON:0002371;1.96e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,3.03e-17,3;UBERON:0001775,3.03e-17,3;UBERON:0002203,7.88e-15,6;UBERON:0001768,7.88e-15,6;UBERON:0002200,7.88e-15,6;UBERON:0000488,4.61e-13,4;UBERON:0006876,3.47e-12,11;UBERON:0002329,1.72e-08,71;UBERON:0003059,1.72e-08,71;UBERON:0007282,1.72e-08,71;UBERON:0004290,1.72e-08,71;UBERON:0009618,1.72e-08,71;UBERON:0003077,2.43e-08,72;UBERON:0007285,2.43e-08,72;UBERON:0007524,3.39e-08,73;UBERON:0003210,9.52e-08,3;UBERON:0005085,1.43e-07,31;UBERON:0007503,1.60e-07,78;UBERON:0000486,6.20e-07,83 | |||
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| ||
|short_description=p@chrX:13446901..13446908,+ | |||
}} | }} |
Latest revision as of 05:55, 1 August 2015
Short description: | p@chrX:13446901..13446908, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:13446901..13446908, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.03e-17 | 3 |
ciliated epithelial cell | 3.03e-17 | 3 |
multi-ciliated epithelial cell | 3.03e-17 | 3 |
non-pigmented ciliary epithelial cell | 3.03e-17 | 3 |
mesenchymal stem cell of the bone marrow | 6.14e-15 | 6 |
cell of skeletal muscle | 4.83e-10 | 9 |
bone marrow cell | 5.34e-09 | 10 |
leptomeningeal cell | 9.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 3.03e-17 | 3 |
ciliary body | 3.03e-17 | 3 |
vasculature of eye | 7.88e-15 | 6 |
uvea | 7.88e-15 | 6 |
vasculature of head | 7.88e-15 | 6 |
atypical epithelium | 4.61e-13 | 4 |
vasculature of organ | 3.47e-12 | 11 |
somite | 1.72e-08 | 71 |
presomitic mesoderm | 1.72e-08 | 71 |
presumptive segmental plate | 1.72e-08 | 71 |
dermomyotome | 1.72e-08 | 71 |
trunk paraxial mesoderm | 1.72e-08 | 71 |
paraxial mesoderm | 2.43e-08 | 72 |
presumptive paraxial mesoderm | 2.43e-08 | 72 |
dense mesenchyme tissue | 3.39e-08 | 73 |
blood-cerebrospinal fluid barrier | 9.52e-08 | 3 |
ectodermal placode | 1.43e-07 | 31 |
epithelial vesicle | 1.60e-07 | 78 |
multilaminar epithelium | 6.20e-07 | 83 |