FFCP PHASE1:Hg19::chrX:1368516..1368527,-: Difference between revisions
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|id=chrX:1368516..1368527,-
|short_description=p@chrX:1368516..1368527,-
|description=CAGE_peak_at_chrX:1368516..1368527,-
|association_with_transcript=NA
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:1368516..1368527,- | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_at_chrX:1368516..1368527,- | |||
|id=chrX:1368516..1368527,- | |||
|ontology_enrichment_celltype=CL:0000860!4.80e-53!45;CL:0002057!8.00e-47!42;CL:0000839!3.60e-46!70;CL:0000766!5.03e-46!76;CL:0000557!1.86e-45!71;CL:0002194!1.22e-39!63;CL:0000576!1.22e-39!63;CL:0000040!1.22e-39!63;CL:0000559!1.22e-39!63;CL:0002009!2.69e-38!65;CL:0000763!6.64e-35!112;CL:0000049!6.64e-35!112;CL:0000738!7.17e-27!140;CL:0002031!3.67e-26!124;CL:0000037!1.63e-24!172;CL:0000566!1.63e-24!172;CL:0002032!8.04e-24!165;CL:0000837!8.04e-24!165;CL:0000988!7.42e-23!182;CL:0002087!6.69e-21!119;CL:0002274!1.02e-10!5;CL:0000457!1.02e-10!5;CL:0002191!1.02e-10!5;CL:0000097!1.02e-10!5;CL:0000831!1.02e-10!5;CL:0002028!1.02e-10!5;CL:0000134!9.60e-09!358;CL:0000784!1.56e-08!3;CL:0002320!1.84e-08!365;CL:0002150!3.70e-08!3;CL:0000861!3.70e-08!3;CL:0000219!1.82e-07!390;CL:0000048!5.40e-07!430;CL:0000723!8.20e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-73;33!CL:0002057;3.46e-73;33!CL:0000473;2.96e-54;39!CL:0000234;2.96e-54;39!CL:0000576;5.48e-37;48!CL:0000766;1.81e-21;69!CL:0000763;1.42e-13;100!CL:0002087;2.54e-12;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.73e-65,42;CL:0002057,4.73e-65,42;CL:0000473,1.08e-56,48;CL:0000234,1.08e-56,48;CL:0000766,8.15e-47,72;CL:0000839,2.38e-45,66;CL:0002194,5.56e-45,59;CL:0000576,5.56e-45,59;CL:0000040,5.56e-45,59;CL:0000559,5.56e-45,59;CL:0000557,1.18e-44,67;CL:0002009,1.81e-43,61;CL:0000763,1.07e-30,108;CL:0000049,1.07e-30,108;CL:0002031,3.26e-24,120;CL:0000738,5.34e-24,136;CL:0002087,2.61e-22,115;CL:0002032,5.76e-20,161;CL:0000837,5.76e-20,161;CL:0000037,4.75e-19,168;CL:0000988,5.62e-18,177;CL:0000134,7.48e-08,354;CL:0002320,1.18e-07,361;CL:0000219,5.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.00e-46;42!CL:0000049;6.38e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.79e-40!80;UBERON:0001474!9.87e-37!86;UBERON:0004765!1.43e-30!101;UBERON:0001434!1.43e-30!101;UBERON:0002390!3.19e-30!102;UBERON:0003061!3.19e-30!102;UBERON:0002193!4.34e-27!112;UBERON:0002405!2.97e-26!115;UBERON:0002204!4.21e-18!167;UBERON:0003081!8.42e-13!216;UBERON:0002384!4.46e-08!375;UBERON:0002038!8.67e-07!1;UBERON:0009661!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.30e-39,76;UBERON:0001474,3.13e-36,82;UBERON:0004765,7.18e-33,90;UBERON:0002405,9.32e-32,93;UBERON:0002390,4.74e-30,98;UBERON:0003061,4.74e-30,98;UBERON:0001434,2.05e-29,100;UBERON:0002193,4.17e-27,108;UBERON:0002204,7.67e-17,167;UBERON:0003081,1.77e-13,203;UBERON:0000926,7.17e-08,315;UBERON:0004120,7.17e-08,315;UBERON:0006603,7.17e-08,315;UBERON:0002384,2.22e-07,371 | |||
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|short_description=p@chrX:1368516..1368527,- | |||
}} | }} |
Latest revision as of 06:05, 1 August 2015
Short description: | p@chrX:1368516..1368527, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:1368516..1368527, - |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.73e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.73e-65 | 42 |
defensive cell | 1.08e-56 | 48 |
phagocyte | 1.08e-56 | 48 |
myeloid leukocyte | 8.15e-47 | 72 |
myeloid lineage restricted progenitor cell | 2.38e-45 | 66 |
monopoietic cell | 5.56e-45 | 59 |
monocyte | 5.56e-45 | 59 |
monoblast | 5.56e-45 | 59 |
promonocyte | 5.56e-45 | 59 |
granulocyte monocyte progenitor cell | 1.18e-44 | 67 |
macrophage dendritic cell progenitor | 1.81e-43 | 61 |
myeloid cell | 1.07e-30 | 108 |
common myeloid progenitor | 1.07e-30 | 108 |
hematopoietic lineage restricted progenitor cell | 3.26e-24 | 120 |
leukocyte | 5.34e-24 | 136 |
nongranular leukocyte | 2.61e-22 | 115 |
hematopoietic oligopotent progenitor cell | 5.76e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.76e-20 | 161 |
hematopoietic stem cell | 4.75e-19 | 168 |
hematopoietic cell | 5.62e-18 | 177 |
mesenchymal cell | 7.48e-08 | 354 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 5.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.30e-39 | 76 |
bone element | 3.13e-36 | 82 |
skeletal element | 7.18e-33 | 90 |
immune system | 9.32e-32 | 93 |
hematopoietic system | 4.74e-30 | 98 |
blood island | 4.74e-30 | 98 |
skeletal system | 2.05e-29 | 100 |
hemolymphoid system | 4.17e-27 | 108 |
musculoskeletal system | 7.67e-17 | 167 |
lateral plate mesoderm | 1.77e-13 | 203 |
mesoderm | 7.17e-08 | 315 |
mesoderm-derived structure | 7.17e-08 | 315 |
presumptive mesoderm | 7.17e-08 | 315 |
connective tissue | 2.22e-07 | 371 |