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FFCP PHASE1:Mm9::chr11:69660352..69660449,+: Difference between revisions

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{{FFCP|EntrezGene=70310|HGNC=|UniProt=Q9JIZ9|association_with_transcript=174bp_to_ENSMUST00000019605_5end|description=CAGE_peak_2_at_Plscr3_5end|id=chr11:69660352..69660449,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!1.49e-12!41;UBERON:0003081!7.21e-12!88;UBERON:0001004!1.17e-11!42;UBERON:0002390!2.89e-10!45;UBERON:0003061!2.89e-10!45;UBERON:0002193!1.47e-09!48;UBERON:0004177!1.64e-08!29;UBERON:0000072!2.20e-08!27;UBERON:0000926!3.37e-08!193;UBERON:0004120!3.37e-08!193;UBERON:0006603!3.37e-08!193;UBERON:0002370!5.68e-08!23;UBERON:0000974!5.68e-08!23;UBERON:0004807!5.68e-08!23;UBERON:0005058!5.68e-08!23;UBERON:0003351!5.68e-08!23;UBERON:0009113!5.68e-08!23;UBERON:0003295!5.68e-08!23;UBERON:0009722!5.68e-08!23;UBERON:0005562!5.68e-08!23;UBERON:0007690!5.68e-08!23;UBERON:0006562!2.16e-07!24;UBERON:0001557!2.16e-07!24;UBERON:0001042!2.16e-07!24;UBERON:0008814!2.16e-07!24;UBERON:0009145!2.16e-07!24;UBERON:0003408!4.50e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000065,9.95e-13,41;UBERON:0001004,8.74e-12,42;UBERON:0003081,2.15e-11,87;UBERON:0002390,2.32e-10,45;UBERON:0003061,2.32e-10,45;UBERON:0002193,1.56e-09,48;UBERON:0002405,1.56e-09,48;UBERON:0004177,1.16e-08,29;UBERON:0005057,1.16e-08,29;UBERON:0000072,1.56e-08,27;UBERON:0002370,3.98e-08,23;UBERON:0000974,3.98e-08,23;UBERON:0004807,3.98e-08,23;UBERON:0005058,3.98e-08,23;UBERON:0003351,3.98e-08,23;UBERON:0009113,3.98e-08,23;UBERON:0003295,3.98e-08,23;UBERON:0009722,3.98e-08,23;UBERON:0005562,3.98e-08,23;UBERON:0007690,3.98e-08,23;UBERON:0006562,1.55e-07,24;UBERON:0001557,1.55e-07,24;UBERON:0001042,1.55e-07,24;UBERON:0008814,1.55e-07,24;UBERON:0009145,1.55e-07,24;UBERON:0000926,3.00e-07,120;UBERON:0004120,3.00e-07,120;UBERON:0006603,3.00e-07,120;UBERON:0001041,3.48e-07,80;UBERON:0003408,3.54e-07,24|phase1_expression=2.08193501236232,0.697950815278722,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,2.33612640595526,10.5881125222093,3.94208422024667,5.14941957908386,1.54096171402954,2.07407613387875,5.47842335779858,10.4030278878607,0.666219523631325,1.21485160433896,1.39912375625629,2.5236973228659,2.60517423850904,1.69755860719212,3.91199134694921,5.65958421845046,4.17919662622297,0.95995453676044,1.37645568640302,0,0.86152399231815,1.29282739611533,1.14014051673824,1.76421090831952,3.10422714917427,1.27006134691926,2.46025915033828,0,0.866554859253824,1.82858109894342,0.816677425049476,2.51118978442145,1.5626706890476,1.57057123192139,0.588231488031014,0.683045484958446,1.94204141212461,13.4709595233868,12.8748702648783,17.8040349596831,50.8554373826225,5.01457859675027,5.71184075109627,7.38833616482277,11.0589273084036,4.31257693094915,3.6912173332702,6.5282592781021,11.4271891708438,10.8048963135098,8.5960031981627,6.70373719960675,0.809265843438391,1.5869729378161,0.633831403506179,24.0579617769084,39.1289710288901,11.6986963246582,23.7327927016074,17.7620028736525,17.6764065205859,8.83702102239575,1.8664130215526,2.43010688997043,0.841299845405528,1.14260393761521,1.54607978666129,0.734944795289724,1.15014565221884,2.75765635983006,2.20231761998777,0.255374676170375,0.307213066512487,1.84640802822271,1.37231465403614,1.04182674111352,0.558365998002762,1.12552522006336,1.06958773443767,0.883885756421003,1.13897344639282,1.3047961207771,0.984440513331393,3.92972112555285,7.24661221754194,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,2.52799956237153,4.60161870960756,3.11743205523443,3.18005617059306,1.97180787687353,5.13305909657271,10.1922095882658,0,6.92771331235885,7.09407623330276,8.08839112023653,2.16949371466214,12.6879562987114,1.48442139064825,3.46970653532272,3.65358573974569,2.53677046981664,2.11011696773672,3.41007250693544,1.50799909595611,2.47194967734374,3.32578520915797,15.0383793831479,3.23533699894818,8.61281921995535,7.27312879702833,0,0.292780797011547,0.628340120440365,1.27728527604296,10.6635460810269,9.59844369589452,12.0716715719411,0.149790639404823,0.457500602818626,1.63350657746724,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,5.49932564791708,7.58882520721567,0.758168275301024,0.420883711772948,2.21204753036596,1.37941262660084,3.42118046630164,1.50704817835715,1.97305847538851,2.43416068541215,1.78033276663485,1.03481348295606,4.74249584452253,5.29497024469894,4.92663147659057,5.04150184583422,7.22922847986555,5.2237824978325,4.11564272815887,4.37875387000685,8.42655824775882,9.52187256324446,15.344828967362,2.07125772535502,2.81431271977315,2.52086886045421,2.60419209143731,2.16440654922144,3.08534225774756,2.32533944750408,3.75582761959467,3.97002164048376,2.46839774870221,4.26835406605648,3.32382119138008,3.36259971078264,6.14740322814942,4.96563749413376,1.05144974282064,2.57261530948211,0.330418782983798,0.528901133327089,4.90562976231038,4.64473343720877,6.05677068213839,5.64713868945359,8.67274370994994,5.326317531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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:70310
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9JIZ9
|association_with_transcript=174bp_to_ENSMUST00000019605_5end
|cluster_id=chr11:69660352..69660449,+
|description=CAGE_peak_2_at_Plscr3_5end
|id=chr11:69660352..69660449,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!1.49e-12!41;UBERON:0003081!7.21e-12!88;UBERON:0001004!1.17e-11!42;UBERON:0002390!2.89e-10!45;UBERON:0003061!2.89e-10!45;UBERON:0002193!1.47e-09!48;UBERON:0004177!1.64e-08!29;UBERON:0000072!2.20e-08!27;UBERON:0000926!3.37e-08!193;UBERON:0004120!3.37e-08!193;UBERON:0006603!3.37e-08!193;UBERON:0002370!5.68e-08!23;UBERON:0000974!5.68e-08!23;UBERON:0004807!5.68e-08!23;UBERON:0005058!5.68e-08!23;UBERON:0003351!5.68e-08!23;UBERON:0009113!5.68e-08!23;UBERON:0003295!5.68e-08!23;UBERON:0009722!5.68e-08!23;UBERON:0005562!5.68e-08!23;UBERON:0007690!5.68e-08!23;UBERON:0006562!2.16e-07!24;UBERON:0001557!2.16e-07!24;UBERON:0001042!2.16e-07!24;UBERON:0008814!2.16e-07!24;UBERON:0009145!2.16e-07!24;UBERON:0003408!4.50e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000065,9.95e-13,41;UBERON:0001004,8.74e-12,42;UBERON:0003081,2.15e-11,87;UBERON:0002390,2.32e-10,45;UBERON:0003061,2.32e-10,45;UBERON:0002193,1.56e-09,48;UBERON:0002405,1.56e-09,48;UBERON:0004177,1.16e-08,29;UBERON:0005057,1.16e-08,29;UBERON:0000072,1.56e-08,27;UBERON:0002370,3.98e-08,23;UBERON:0000974,3.98e-08,23;UBERON:0004807,3.98e-08,23;UBERON:0005058,3.98e-08,23;UBERON:0003351,3.98e-08,23;UBERON:0009113,3.98e-08,23;UBERON:0003295,3.98e-08,23;UBERON:0009722,3.98e-08,23;UBERON:0005562,3.98e-08,23;UBERON:0007690,3.98e-08,23;UBERON:0006562,1.55e-07,24;UBERON:0001557,1.55e-07,24;UBERON:0001042,1.55e-07,24;UBERON:0008814,1.55e-07,24;UBERON:0009145,1.55e-07,24;UBERON:0000926,3.00e-07,120;UBERON:0004120,3.00e-07,120;UBERON:0006603,3.00e-07,120;UBERON:0001041,3.48e-07,80;UBERON:0003408,3.54e-07,24
|phase1_expression=2.08193501236232,0.697950815278722,0.454999239389536,0.30246421130683,1.50268718983904,0.671517087647559,2.33612640595526,10.5881125222093,3.94208422024667,5.14941957908386,1.54096171402954,2.07407613387875,5.47842335779858,10.4030278878607,0.666219523631325,1.21485160433896,1.39912375625629,2.5236973228659,2.60517423850904,1.69755860719212,3.91199134694921,5.65958421845046,4.17919662622297,0.95995453676044,1.37645568640302,0,0.86152399231815,1.29282739611533,1.14014051673824,1.76421090831952,3.10422714917427,1.27006134691926,2.46025915033828,0,0.866554859253824,1.82858109894342,0.816677425049476,2.51118978442145,1.5626706890476,1.57057123192139,0.588231488031014,0.683045484958446,1.94204141212461,13.4709595233868,12.8748702648783,17.8040349596831,50.8554373826225,5.01457859675027,5.71184075109627,7.38833616482277,11.0589273084036,4.31257693094915,3.6912173332702,6.5282592781021,11.4271891708438,10.8048963135098,8.5960031981627,6.70373719960675,0.809265843438391,1.5869729378161,0.633831403506179,24.0579617769084,39.1289710288901,11.6986963246582,23.7327927016074,17.7620028736525,17.6764065205859,8.83702102239575,1.8664130215526,2.43010688997043,0.841299845405528,1.14260393761521,1.54607978666129,0.734944795289724,1.15014565221884,2.75765635983006,2.20231761998777,0.255374676170375,0.307213066512487,1.84640802822271,1.37231465403614,1.04182674111352,0.558365998002762,1.12552522006336,1.06958773443767,0.883885756421003,1.13897344639282,1.3047961207771,0.984440513331393,3.92972112555285,7.24661221754194,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,2.52799956237153,4.60161870960756,3.11743205523443,3.18005617059306,1.97180787687353,5.13305909657271,10.1922095882658,0,6.92771331235885,7.09407623330276,8.08839112023653,2.16949371466214,12.6879562987114,1.48442139064825,3.46970653532272,3.65358573974569,2.53677046981664,2.11011696773672,3.41007250693544,1.50799909595611,2.47194967734374,3.32578520915797,15.0383793831479,3.23533699894818,8.61281921995535,7.27312879702833,0,0.292780797011547,0.628340120440365,1.27728527604296,10.6635460810269,9.59844369589452,12.0716715719411,0.149790639404823,0.457500602818626,1.63350657746724,0.347648640384553,0.511430914660661,0.20778804455956,0.162241263067758,5.49932564791708,7.58882520721567,0.758168275301024,0.420883711772948,2.21204753036596,1.37941262660084,3.42118046630164,1.50704817835715,1.97305847538851,2.43416068541215,1.78033276663485,1.03481348295606,4.74249584452253,5.29497024469894,4.92663147659057,5.04150184583422,7.22922847986555,5.2237824978325,4.11564272815887,4.37875387000685,8.42655824775882,9.52187256324446,15.344828967362,2.07125772535502,2.81431271977315,2.52086886045421,2.60419209143731,2.16440654922144,3.08534225774756,2.32533944750408,3.75582761959467,3.97002164048376,2.46839774870221,4.26835406605648,3.32382119138008,3.36259971078264,6.14740322814942,4.96563749413376,1.05144974282064,2.57261530948211,0.330418782983798,0.528901133327089,4.90562976231038,4.64473343720877,6.05677068213839,5.64713868945359,8.67274370994994,5.32631753115166,1.89811624617805,4.6115707322723,4.02136334080431,5.76973768919337,4.48417400373976,0,2.16138049874694,1.39398891278057,4.1726938209678,2.74196430263349,4.50830942692322,3.25842124552503,2.13347735884388,4.27828501330943,4.3000845244495,1.03327103585722,1.56998727841375,2.09775178667061,1.48226313543574,4.00428253718626,6.09332884850929,4.94696647246678,4.86864291332407,5.06472035480075,5.0925170356284,9.78166867332756,8.10676133875177,2.47105271869273,1.43768206527355,4.83783231969054,2.80833905803104,1.76805214562978,0.179397413521912,0.482443521363367,11.4546977903295,2.84237117655727,5.0519142697028,4.92260748748046,4.69380496577004,7.20276906999808,6.9032655856944,8.00047956216975,9.30047350226527,15.723992965063,9.72674088810671,7.70157579163969,9.67035898449015,9.69148692496127,19.6028669121054,44.0563603893155,1.47529281905711,2.48343071674259,0.80275294993896,0.234423373184406,6.72133276044369,2.52470927204373,4.41711507182759,4.68526493155966,5.38558494331997,5.4962823529087,5.56996685205985,4.24614796183249,5.26253912177363,4.38383786866968,5.53402889125133,0.321321316421807,4.82596289708113,5.87616492101942,5.04949573996086,4.28922319728592,1.32745138339963,4.61283208694465,5.13950046840077,2.45186603682668,5.61073596473468,3.3817866273832,2.58428293168221,3.99887102425256,2.49548164869305,1.26414703174326,0,3.09406629744561,4.42571487479924,3.96134406868882,5.95049945400671,5.14408884075822,4.07882537377229,3.21063871683727,3.29098041204242,4.56697423671899,1.40803024838226,0.63549621259146,0.882113592219848,5.60613260001032,8.88054346827481,5.91066664295927,5.96861720015682,4.10352249362653,2.91480836629851,0.18542530201051,3.75915937755276,6.81076664278634,8.88933731374616,7.53473828018764,4.51090951479383,2.51655990527175,10.7086410896129,12.3157278044819,9.25939824489639,0.954670618015114,6.16855187483214,2.43983360552218,6.04829908602087,5.01811910434725,6.55087691238533,2.15782954215713,3.38879168473877,1.04702376793612,0.388844919875379,0.621339313086926,1.12738587736838,2.8408143748356,1.82004339502807,1.75006069509643,3.35815541042101,3.04121025883401,4.10750335260139,1.69265700297135,2.62148361064277,0.241584120826006,1.15212002503146,24.9648785296261,11.149886840959,13.8659792172517,11.3031115990682,12.3528420010562,15.6958270277199,16.1061902356758,18.7565699511713,24.0300150876591,26.6723823292499,23.4925011368838,23.9746386619791,24.534019618284,27.2323182083056,1.81384306892169,1.99787358036658,1.16628013592318,0.839423081820392,1.35232715822533,4.31669693537719,4.94509385521616,4.07299920250225,0.501572104035363,0,0,0,0.859265911718438,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0.51776031175182,2.80225838477277,5.1873233542134,2.21953687480374,3.8897074730927,4.61148957781561,3.30918315210025,5.778414922842,2.26638562962784,4.49286893428541,3.03236654116557,3.8021894983536,1.88626341386076,3.37109426891577,3.13723246783859,3.21638626151434,3.81034953026459,2.54945517078682,2.70072908649187,2.06042950401653,1.76638704161277,1.71434626192708,4.08194354166476,3.09967046931517,2.90692833264657,2.63506265162926,3.80765735512544,3.29270351170991,2.89376682581627,3.53090695999241,3.36685362994643,2.37270036248348,2.56111654176465,5.72923460437565,2.63392630016142,3.08650577569826,4.99621155875892,3.50897412668113,3.65280791882107,5.35607329792761,7.27951683094401,5.10109238364927
|short_description=p2@Plscr3
}}

Revision as of 19:47, 3 August 2015

Short description:p2@Plscr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Plscr3_5end
Coexpression cluster:NA
Association with transcript: 174bp_to_ENSMUST00000019605_5end
EntrezGene:70310
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Plscr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.47
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.80
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.43
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.06
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E723.73
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.76
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E88.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.98
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H912.69
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C53.47
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.07
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.59
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E24.93
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C45.22
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.52
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.34
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.97
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.32
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D24.97
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D54.64
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F75.33
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A54.48
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G74.28
kidney, neonate N10.CNhs11206.758-6D54.30
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H66.09
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G49.78
liver, neonate N00.CNhs11117.641-24F48.11
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E59.30
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H29.69
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A144.06
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.39
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H75.88
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C35.61
skin, neonate N00.CNhs11124.650-25G48.88
skin, neonate N03.CNhs11215.662-22H35.91
skin, neonate N06.CNhs11097.693-20I55.97
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C16.81
spleen, embryo E18.CNhs11011.1271-21F28.89
spleen, neonate N10.CNhs11116.752-24D17.53
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C912.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.26
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E36.17
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D92.62
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B524.96
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C511.30
thymus, embryo E17.CNhs10581.478-18C112.35
thymus, embryo E18.CNhs10595.1273-19G415.70
thymus, neonate N02.CNhs11181.1541-43F816.11
thymus, neonate N03.CNhs11137.2104-43C718.76
thymus, neonate N06.CNhs11197.681-26C424.03
thymus, neonate N07.CNhs11211.713-19D326.67
thymus, neonate N10.CNhs11194.748-24E423.49
thymus, neonate N20.CNhs11186.820-7A223.97
thymus, neonate N25.CNhs11125.1362-25G724.53
thymus, neonate N30.CNhs11132.1393-42G227.23
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract9.95e-1341
respiratory system8.74e-1242
lateral plate mesoderm2.15e-1187
hematopoietic system2.32e-1045
blood island2.32e-1045
hemolymphoid system1.56e-0948
immune system1.56e-0948
hemopoietic organ1.16e-0829
immune organ1.16e-0829
segment of respiratory tract1.56e-0827
thymus3.98e-0823
neck3.98e-0823
respiratory system epithelium3.98e-0823
hemolymphoid system gland3.98e-0823
pharyngeal epithelium3.98e-0823
thymic region3.98e-0823
pharyngeal gland3.98e-0823
entire pharyngeal arch endoderm3.98e-0823
thymus primordium3.98e-0823
early pharyngeal endoderm3.98e-0823
pharynx1.55e-0724
upper respiratory tract1.55e-0724
chordate pharynx1.55e-0724
pharyngeal arch system1.55e-0724
pharyngeal region of foregut1.55e-0724
mesoderm3.00e-07120
mesoderm-derived structure3.00e-07120
presumptive mesoderm3.00e-07120
foregut3.48e-0780
gland of gut3.54e-0724
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