FFCP PHASE1:Mm9::chr3:67308130..67308141,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:67308130..67308141,+
|short_description=p@chr3:67308130..67308141,+
|description=CAGE_peak_at_chr3:67308130..67308141,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=445 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:67308130..67308141,+ | |||
|description=CAGE_peak_at_chr3:67308130..67308141,+ | |||
|id=chr3:67308130..67308141,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.49e-13!3;CL:0000359!1.49e-13!3;CL:0002539!1.49e-13!3;CL:0000514!1.49e-13!3;CL:0000680!5.59e-07!6;CL:0000183!5.59e-07!6;CL:0000187!5.59e-07!6;CL:0000056!5.59e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,5.61e-30,3;CL:0000359,5.61e-30,3;CL:0002539,5.61e-30,3;CL:0000514,5.61e-30,3;CL:0000680,8.02e-16,6;CL:0000187,8.02e-16,6;CL:0000056,8.02e-16,6;CL:0000222,8.67e-14,7;CL:0000355,4.56e-11,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001135!1.49e-13!3;UBERON:0004237!1.49e-13!3;UBERON:0004695!1.49e-13!3;UBERON:0002111!1.49e-13!3;UBERON:0004178!1.49e-13!3;UBERON:0000947!2.82e-10!4;UBERON:0001637!2.82e-10!4;UBERON:0003509!2.82e-10!4;UBERON:0004573!2.82e-10!4;UBERON:0004571!2.82e-10!4;UBERON:0010191!2.82e-10!4;UBERON:0004572!2.82e-10!4;UBERON:0000055!2.66e-08!5;UBERON:0001981!2.66e-08!5;UBERON:0002049!2.66e-08!5;UBERON:0007500!2.66e-08!5;UBERON:0007798!2.66e-08!5;UBERON:0004537!2.66e-08!5;UBERON:0006965!2.66e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,5.61e-30,3;UBERON:0004237,5.61e-30,3;UBERON:0004695,5.61e-30,3;UBERON:0002111,5.61e-30,3;UBERON:0004178,5.61e-30,3;UBERON:0000947,6.52e-23,4;UBERON:0001637,6.52e-23,4;UBERON:0004573,6.52e-23,4;UBERON:0003509,6.52e-23,4;UBERON:0004571,6.52e-23,4;UBERON:0010191,6.52e-23,4;UBERON:0004572,6.52e-23,4;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0001134,4.56e-11,9;UBERON:0002036,4.56e-11,9;UBERON:0002385,4.56e-11,9;UBERON:0000486,4.56e-11,9;UBERON:0007503,4.56e-11,9;UBERON:0001015,4.56e-11,9;UBERON:0002329,4.56e-11,9;UBERON:0003082,4.56e-11,9;UBERON:0003059,4.56e-11,9;UBERON:0007282,4.56e-11,9;UBERON:0004290,4.56e-11,9;UBERON:0009618,4.56e-11,9;UBERON:0000383,4.12e-10,10;UBERON:0007524,2.51e-09,11;UBERON:0003077,2.51e-09,11;UBERON:0007285,2.51e-09,11 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,17.2533947031981,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.608261587317087,17.2533947031981,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.476872379894642,0,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:67308130..67308141,+ | |||
}} | }} |
Latest revision as of 23:19, 3 August 2015
Short description: | p@chr3:67308130..67308141, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:67308130..67308141, + |
Coexpression cluster: | MCL_coexpression_mm9:445 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 5.61e-30 | 3 |
vascular associated smooth muscle cell | 5.61e-30 | 3 |
aortic smooth muscle cell | 5.61e-30 | 3 |
smooth muscle myoblast | 5.61e-30 | 3 |
muscle precursor cell | 8.02e-16 | 6 |
muscle cell | 8.02e-16 | 6 |
myoblast | 8.02e-16 | 6 |
mesodermal cell | 8.67e-14 | 7 |
multi-potent skeletal muscle stem cell | 4.56e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 5.61e-30 | 3 |
blood vessel smooth muscle | 5.61e-30 | 3 |
arterial system smooth muscle | 5.61e-30 | 3 |
artery smooth muscle tissue | 5.61e-30 | 3 |
aorta smooth muscle tissue | 5.61e-30 | 3 |
aorta | 6.52e-23 | 4 |
artery | 6.52e-23 | 4 |
systemic artery | 6.52e-23 | 4 |
arterial blood vessel | 6.52e-23 | 4 |
systemic arterial system | 6.52e-23 | 4 |
aortic system | 6.52e-23 | 4 |
arterial system | 6.52e-23 | 4 |
vessel | 1.16e-18 | 5 |
epithelial tube open at both ends | 1.16e-18 | 5 |
blood vessel | 1.16e-18 | 5 |
vasculature | 1.16e-18 | 5 |
vascular system | 1.16e-18 | 5 |
blood vasculature | 1.16e-18 | 5 |
vascular cord | 1.16e-18 | 5 |
skeletal muscle tissue | 4.56e-11 | 9 |
striated muscle tissue | 4.56e-11 | 9 |
muscle tissue | 4.56e-11 | 9 |
multilaminar epithelium | 4.56e-11 | 9 |
epithelial vesicle | 4.56e-11 | 9 |
musculature | 4.56e-11 | 9 |
somite | 4.56e-11 | 9 |
myotome | 4.56e-11 | 9 |
presomitic mesoderm | 4.56e-11 | 9 |
presumptive segmental plate | 4.56e-11 | 9 |
dermomyotome | 4.56e-11 | 9 |
trunk paraxial mesoderm | 4.56e-11 | 9 |
musculature of body | 4.12e-10 | 10 |
dense mesenchyme tissue | 2.51e-09 | 11 |
paraxial mesoderm | 2.51e-09 | 11 |
presumptive paraxial mesoderm | 2.51e-09 | 11 |