FFCP PHASE1:Mm9::chr19:37509324..37509337,+: Difference between revisions
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{{FFCP|EntrezGene=15242|HGNC=|MCL_coexpression_id=3189|UniProt=P43120|association_with_transcript=0bp_to_NM_008245,uc008hio.1_5end|description=CAGE_peak_1_at_Hhex_5end|id=chr19:37509324..37509337,+|ontology_enrichment_celltype=CL:0000049!9.17e-09!19;CL:0000763!2.62e-07!16;CL:0000414!7.82e-07!11|ontology_enrichment_celltype_v019_2=CL:0000049,8.65e-09,19;CL:0000763,2.50e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.54e-17!85;UBERON:0009569!3.08e-15!66;UBERON:0005172!6.69e-14!49;UBERON:0005173!6.69e-14!49;UBERON:0002417!6.69e-14!49;UBERON:0000916!6.69e-14!49;UBERON:0000466!7.66e-14!79;UBERON:0002107!1.76e-13!22;UBERON:0007499!1.76e-13!22;UBERON:0006925!1.76e-13!22;UBERON:0009497!1.76e-13!22;UBERON:0000015!1.76e-13!22;UBERON:0002423!1.76e-13!22;UBERON:0006235!1.76e-13!22;UBERON:0008835!1.76e-13!22;UBERON:0003894!1.76e-13!22;UBERON:0004161!1.76e-13!22;UBERON:0008836!1.76e-13!22;UBERON:0002100!1.93e-13!98;UBERON:0009854!8.56e-13!23;UBERON:0009856!8.56e-13!23;UBERON:0000926!3.56e-12!193;UBERON:0004120!3.56e-12!193;UBERON:0006603!3.56e-12!193;UBERON:0002365!6.52e-12!25;UBERON:0002330!6.52e-12!25;UBERON:0002405!5.29e-09!70;UBERON:0005256!4.86e-08!47;UBERON:0002371!1.00e-07!16;UBERON:0003104!1.10e-07!131;UBERON:0009142!1.10e-07!131;UBERON:0001041!2.13e-07!92;UBERON:0003914!7.86e-07!47;UBERON:0002075!9.06e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.61e-20,79;UBERON:0002100,2.38e-16,90;UBERON:0009569,2.65e-15,66;UBERON:0005172,6.06e-14,49;UBERON:0005173,6.06e-14,49;UBERON:0002417,6.06e-14,49;UBERON:0000916,6.06e-14,49;UBERON:0002107,1.59e-13,22;UBERON:0007499,1.59e-13,22;UBERON:0006925,1.59e-13,22;UBERON:0009497,1.59e-13,22;UBERON:0000015,1.59e-13,22;UBERON:0002423,1.59e-13,22;UBERON:0006235,1.59e-13,22;UBERON:0008835,1.59e-13,22;UBERON:0003894,1.59e-13,22;UBERON:0004161,1.59e-13,22;UBERON:0008836,1.59e-13,22;UBERON:0009854,7.82e-13,23;UBERON:0009856,7.82e-13,23;UBERON:0002365,6.00e-12,25;UBERON:0002330,6.00e-12,25;UBERON:0005256,2.54e-09,45;UBERON:0003104,3.34e-08,61;UBERON:0009142,3.34e-08,61;UBERON:0002371,9.54e-08,16;UBERON:0002075,8.68e-07,19;UBERON:0003914,8.86e-07,47|phase1_expression=0.960893082628764,0.348975407639361,0.454999239389536,0,0,1.17515490338323,1.63528848416868,0.387369970324729,0.422366166455,0.936258105287974,0,0,0,0.0874204024189974,20.9859149943868,20.4500020063724,11.1929900500503,94.0077252767548,86.5192076052212,77.6633062790395,5.10259740906419,39.4185076267515,45.7099630993137,16.3192271249275,14.4527847072317,0,0.430761996159075,0.646413698057667,0.950117097281869,1.00812051903972,0.886922042621219,43.8171164687146,43.0545351309199,31.6963362030877,0.577703239502549,0.166234645358492,0.816677425049476,132.255995312863,71.1015163516658,122.504556089869,177.645909385366,179.640962544071,177.211278856371,0.377690453926732,0.405507724878058,0.734187008646726,0,0,0,0,0.139986421625363,0,68.119738059441,1.45072428402269,2.35265659399725,1.80081605225163,2.0057340795713,1.03134418455488,0.404632921719196,1.05798195854407,0.633831403506179,0.338844532069132,0,69.7422280893084,76.142709917657,83.8366535636398,22.4700082888804,14.6002956022191,1.97010263386108,2.16009501330705,3.57552434297349,2.57085885963423,3.09215957332259,1.71487118900936,1.24599112323707,1.83843757322004,2.20231761998777,3.19218345212969,1.53606533256243,1.71452174049252,1.82975287204819,2.6045668527838,1.67509799400829,3.37657566019008,3.0559649555362,5.00868595305235,2.42031857358475,3.16879057903011,0.302904773332736,0.453429360640713,147.830889237856,160.038841118538,145.513865413459,222.897418146418,364.524570188142,564.065850855545,51.6835466084847,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,1.29894624606728,0.253359865475099,1.01104889002957,43.9607936918381,64.9934087954401,143.246664197556,13.3583701609925,24.0527727866592,23.753396217374,25.9242941750511,26.9278139340764,86.7099480174761,1.23597483867187,7.51916655983541,57.4996858767418,7.76480879747564,23.8508839937225,16.4857586065976,3.72783522436244,1.46390398505774,1.04723353406728,1.78819938646014,62.6633101165963,64.789494947288,67.9825714840896,3.14560342750128,2.28750301409313,1.63350657746724,1.73824320192276,3.06858548796397,2.28566849015516,1.62241263067758,6.61955865027056,19.6563013563947,1.0108910337347,1.47309299120532,1.69156575851515,0.689706313300419,1.80062129805349,3.91832526372859,1.56483948048054,1.7935920839879,1.3118241438362,1.81092359517311,3.44908788692548,4.9167580843633,5.63043597324636,3.72632745126877,1.11218899690239,4.179025998266,6.37924622864625,5.17489093728082,50.5593494865529,61.7634977075316,67.3467493567555,9.73491130916859,6.56672967947069,5.94204802821349,9.46978942340841,8.65762619688577,6.78775296704464,8.60375595576509,4.56064782379353,7.12268588439734,5.26591519723137,8.70087559619205,8.67436262140656,7.89479932096795,5.48875288227627,8.99183005694491,2.3131894342054,2.77842453424068,1.32167513193519,1.05780226665418,7.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15242 | |||
|HGNC= | |||
|MCL_coexpression_id=3189 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P43120 | |||
|association_with_transcript=0bp_to_NM_008245,uc008hio.1_5end | |||
|cluster_id=chr19:37509324..37509337,+ | |||
|description=CAGE_peak_1_at_Hhex_5end | |||
|id=chr19:37509324..37509337,+ | |||
|ontology_enrichment_celltype=CL:0000049!9.17e-09!19;CL:0000763!2.62e-07!16;CL:0000414!7.82e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,8.65e-09,19;CL:0000763,2.50e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.54e-17!85;UBERON:0009569!3.08e-15!66;UBERON:0005172!6.69e-14!49;UBERON:0005173!6.69e-14!49;UBERON:0002417!6.69e-14!49;UBERON:0000916!6.69e-14!49;UBERON:0000466!7.66e-14!79;UBERON:0002107!1.76e-13!22;UBERON:0007499!1.76e-13!22;UBERON:0006925!1.76e-13!22;UBERON:0009497!1.76e-13!22;UBERON:0000015!1.76e-13!22;UBERON:0002423!1.76e-13!22;UBERON:0006235!1.76e-13!22;UBERON:0008835!1.76e-13!22;UBERON:0003894!1.76e-13!22;UBERON:0004161!1.76e-13!22;UBERON:0008836!1.76e-13!22;UBERON:0002100!1.93e-13!98;UBERON:0009854!8.56e-13!23;UBERON:0009856!8.56e-13!23;UBERON:0000926!3.56e-12!193;UBERON:0004120!3.56e-12!193;UBERON:0006603!3.56e-12!193;UBERON:0002365!6.52e-12!25;UBERON:0002330!6.52e-12!25;UBERON:0002405!5.29e-09!70;UBERON:0005256!4.86e-08!47;UBERON:0002371!1.00e-07!16;UBERON:0003104!1.10e-07!131;UBERON:0009142!1.10e-07!131;UBERON:0001041!2.13e-07!92;UBERON:0003914!7.86e-07!47;UBERON:0002075!9.06e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,8.61e-20,79;UBERON:0002100,2.38e-16,90;UBERON:0009569,2.65e-15,66;UBERON:0005172,6.06e-14,49;UBERON:0005173,6.06e-14,49;UBERON:0002417,6.06e-14,49;UBERON:0000916,6.06e-14,49;UBERON:0002107,1.59e-13,22;UBERON:0007499,1.59e-13,22;UBERON:0006925,1.59e-13,22;UBERON:0009497,1.59e-13,22;UBERON:0000015,1.59e-13,22;UBERON:0002423,1.59e-13,22;UBERON:0006235,1.59e-13,22;UBERON:0008835,1.59e-13,22;UBERON:0003894,1.59e-13,22;UBERON:0004161,1.59e-13,22;UBERON:0008836,1.59e-13,22;UBERON:0009854,7.82e-13,23;UBERON:0009856,7.82e-13,23;UBERON:0002365,6.00e-12,25;UBERON:0002330,6.00e-12,25;UBERON:0005256,2.54e-09,45;UBERON:0003104,3.34e-08,61;UBERON:0009142,3.34e-08,61;UBERON:0002371,9.54e-08,16;UBERON:0002075,8.68e-07,19;UBERON:0003914,8.86e-07,47 | |||
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| |||
|short_description=p1@Hhex | |||
}} |
Revision as of 00:04, 4 August 2015
Short description: | p1@Hhex |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hhex_5end |
Coexpression cluster: | MCL_coexpression_mm9:3189 |
Association with transcript: | 0bp_to_NM_008245, uc008hio.1_5end |
EntrezGene: | 15242 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 8.65e-09 | 19 |
myeloid cell | 2.50e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 8.61e-20 | 79 |
trunk | 2.38e-16 | 90 |
subdivision of trunk | 2.65e-15 | 66 |
abdomen element | 6.06e-14 | 49 |
abdominal segment element | 6.06e-14 | 49 |
abdominal segment of trunk | 6.06e-14 | 49 |
abdomen | 6.06e-14 | 49 |
liver | 1.59e-13 | 22 |
epithelial sac | 1.59e-13 | 22 |
digestive gland | 1.59e-13 | 22 |
epithelium of foregut-midgut junction | 1.59e-13 | 22 |
anatomical boundary | 1.59e-13 | 22 |
hepatobiliary system | 1.59e-13 | 22 |
foregut-midgut junction | 1.59e-13 | 22 |
hepatic diverticulum | 1.59e-13 | 22 |
liver primordium | 1.59e-13 | 22 |
septum transversum | 1.59e-13 | 22 |
liver bud | 1.59e-13 | 22 |
digestive tract diverticulum | 7.82e-13 | 23 |
sac | 7.82e-13 | 23 |
exocrine gland | 6.00e-12 | 25 |
exocrine system | 6.00e-12 | 25 |
trunk mesenchyme | 2.54e-09 | 45 |
mesenchyme | 3.34e-08 | 61 |
entire embryonic mesenchyme | 3.34e-08 | 61 |
bone marrow | 9.54e-08 | 16 |
viscus | 8.68e-07 | 19 |
epithelial tube | 8.86e-07 | 47 |