FFCP PHASE1:Mm9::chr5:147072560..147072604,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1400 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000175336_5end | |association_with_transcript=0bp_to_ENSMUST00000175336_5end | ||
|cluster_id=chr5:147072560..147072604,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000175336_5end | |description=CAGE_peak_2_at_ENSMUST00000175336_5end | ||
|id=chr5:147072560..147072604,+ | |id=chr5:147072560..147072604,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.80e-12!43;CL:0000221!1.62e-11!44;CL:0000133!1.62e-11!44;CL:0000055!2.19e-11!50;CL:0002321!1.99e-10!70;CL:0000220!1.99e-10!70;CL:0000540!5.40e-10!33;CL:0000047!5.40e-10!33;CL:0000031!5.40e-10!33;CL:0000404!5.40e-10!33;CL:0000548!1.64e-08!115;CL:0000004!1.64e-08!115;CL:0000255!1.64e-08!115;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23;CL:0002371!3.67e-07!118 | |ontology_enrichment_celltype=CL:0002319!1.80e-12!43;CL:0000221!1.62e-11!44;CL:0000133!1.62e-11!44;CL:0000055!2.19e-11!50;CL:0002321!1.99e-10!70;CL:0000220!1.99e-10!70;CL:0000540!5.40e-10!33;CL:0000047!5.40e-10!33;CL:0000031!5.40e-10!33;CL:0000404!5.40e-10!33;CL:0000548!1.64e-08!115;CL:0000004!1.64e-08!115;CL:0000255!1.64e-08!115;CL:0000393!2.14e-08!39;CL:0000211!2.14e-08!39;CL:0000117!2.02e-07!23;CL:0000337!2.02e-07!23;CL:0002371!3.67e-07!118 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.79e-12,43;CL:0000221,1.62e-11,44;CL:0000133,1.62e-11,44;CL:0002321,1.99e-10,70;CL:0000540,5.40e-10,33;CL:0000047,5.40e-10,33;CL:0000031,5.40e-10,33;CL:0000404,5.40e-10,33;CL:0000393,2.13e-08,39;CL:0000211,2.13e-08,39;CL:0000117,2.02e-07,23;CL:0000337,2.02e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-13!73;UBERON:0005743!1.13e-13!73;UBERON:0000073!1.17e-12!75;UBERON:0001016!1.17e-12!75;UBERON:0002020!1.46e-07!34;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102;UBERON:0001049!2.33e-07!52;UBERON:0005068!2.33e-07!52;UBERON:0006241!2.33e-07!52;UBERON:0007135!2.33e-07!52;UBERON:0002616!3.20e-07!49;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50 | |ontology_enrichment_uberon=UBERON:0001017!1.13e-13!73;UBERON:0005743!1.13e-13!73;UBERON:0000073!1.17e-12!75;UBERON:0001016!1.17e-12!75;UBERON:0002020!1.46e-07!34;UBERON:0004121!2.32e-07!102;UBERON:0000924!2.32e-07!102;UBERON:0006601!2.32e-07!102;UBERON:0001049!2.33e-07!52;UBERON:0005068!2.33e-07!52;UBERON:0006241!2.33e-07!52;UBERON:0007135!2.33e-07!52;UBERON:0002616!3.20e-07!49;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.13e-13,73;UBERON:0001016,1.17e-12,75;UBERON:0000073,1.84e-08,54;UBERON:0002020,1.45e-07,34;UBERON:0004121,1.50e-07,95;UBERON:0000924,1.50e-07,95;UBERON:0006601,1.50e-07,95;UBERON:0001049,2.33e-07,52;UBERON:0005068,2.33e-07,52;UBERON:0006241,2.33e-07,52;UBERON:0007135,2.33e-07,52 | |||
|phase1_expression=5.12476310735341,4.18770489167233,8.18998630901165,113.726543451368,107.692581938465,3.86122325397347,27.3326789496765,14.8491821957813,12.8117737158017,17.3207749478275,3.93801326918661,5.2649624936922,10.2720437958723,9.44140346125172,37.9745128469855,11.1361397064404,32.1798463938947,9.14840279538889,9.87223921961319,33.1023928402464,18.8796104135375,7.14894848646374,2.08959831311148,8.95957567643077,13.7645568640302,10.9104073181854,5.59990595006797,2.58565479223067,14.251756459228,3.52842181663903,1.55211357458713,71.1234354274787,47.9750534315965,158.481681015439,4.62162591602039,2.99222361645286,1.83752420636132,2.09265815368454,0.7813353445238,3.14114246384279,5.29408339227913,8.87959130445979,5.82612423637384,11.330713617802,8.71841608487825,6.60768307782054,164.302182313088,28.7793206422189,39.3238267094705,38.3026901176338,62.153971201661,139.439987434022,7.3824346665404,27.5637613964311,12.4354705682712,9.26133969729409,20.9169411155292,27.3306208907044,24.2779753031517,28.0365219014177,53.8756692980252,60.6531712403746,54.2469825627795,110.687665225612,190.851207975426,162.699946322657,131.52444851758,80.6858441175265,21.8785081970888,32.6714370762691,24.8183454394631,34.2781181284564,28.4920417827581,18.3736198822431,27.5076501822338,45.960939330501,133.24021600926,34.9863306353414,41.3201574459295,21.101806036831,20.5847198105422,23.962015045611,49.9737568212472,93.9813558752905,41.7139216430692,56.5686884109442,25.9116459054367,20.5039390407831,7.34544075331885,6.95258352982427,30.1459068249745,94.6466264679525,116.275098064025,159.212441533156,178.688514798109,95.8777538388298,17.9768857768642,10.9075406449957,39.4874726996361,20.8470348961101,2.95771181531029,62.8799739330157,132.498724647456,270.205347198266,13.2059535016841,10.1343946190039,7.58286667522175,47.2721262036908,7.76813650941515,6.38301197978747,24.1144604204929,28.6197549613413,15.681853813412,12.5099791658677,9.64227398512779,11.9383261763192,12.8541383221874,14.0261376212314,16.8076004870476,9.38247729694973,7.72945314611377,14.5462575940567,11.1835056730873,4.9772735491963,31.4170060220183,24.0129631896076,1.31796636956512,0,0.889491589511453,10.3355541189328,10.0650132620098,6.91098936620754,15.4703644971126,9.97290283588289,11.6361304953354,12.1680947300818,10.3876151127323,12.1918831197891,9.35074206204597,9.25944165900485,8.71806967850115,9.19608417733892,6.66229880279792,11.9056806090215,13.1990808353576,4.35586648968489,6.46541899462129,14.7460921321239,5.17363183038821,6.61871280587367,9.85326295318113,6.57587197282724,23.0779216857246,2.089512999133,9.26019613835746,15.9227413454795,0,0,5.96743348730745,5.79952163099405,20.1692411583743,26.4691230347692,6.15536312521547,10.6252685143598,11.1072321278912,12.0917651270212,7.51165523918934,9.10769670463922,6.91151369636618,12.3125598059321,9.40398190731926,11.2573990317506,11.4166059951346,15.4337381574428,15.1408762966172,8.02655976558419,29.407271685558,12.6936271998501,7.89166526980366,15.3276203427889,4.25262622362908,9.27744213267376,2.89091456998331,2.47293313946327,77.3482370317554,9.71723832871664,13.8234364840148,14.3248659869629,9.55324026883689,50.3338868846364,15.7780776408527,12.5459002150251,6.82804443431094,10.1681176222659,9.01661885384643,8.34970444165788,8.53390943537553,6.73303870947058,6.5133633237985,9.44704947069454,9.57692239832386,11.9695249004147,32.9062416066735,4.83850806576673,3.34150291692445,0.899448449539415,5.68008339887808,5.54707467430559,11.2035374783825,9.20627639842594,21.4018499343047,11.5315793538994,309.101644033812,16.7463426450827,24.3389385029357,13.3866805311969,17.7603439386693,25.5695066322585,15.888774354328,10.2325362356062,7.65935389277522,25.4617628662782,8.21415869009757,2.68010011906905,4.28478553594825,9.95181604074774,5.83250033192907,11.5161638617363,5.26200736569707,25.3988137809394,12.4333186943445,15.1881511510587,52.7769493787453,105.51770266083,7.86822836830458,6.62248191131358,15.2523060488402,10.9006868530749,43.934565360949,28.5292147740941,43.8556424988597,55.4423016901227,34.4677436372478,37.5181012785507,32.7514050901119,45.575321457002,39.2666380624648,40.9158201075837,47.4345333535828,8.67567554338879,6.24536374916382,14.4233138970477,7.16702621155735,9.56826713240706,88.9392426877751,25.0064055239631,6.65111825322452,10.5618844663303,9.15435867930396,13.2197113615889,14.9888410037568,16.7225515559653,18.1813662976208,13.5895805912401,99.0934920604988,75.2889465711764,17.702859499197,13.324520958317,20.4386720376752,24.8630960636647,6.0295679438373,19.2638323010236,20.0749805134588,68.8090784998994,6.10146440965647,15.2519091021951,23.155481795771,32.1528193235886,9.52640117505843,2.89502039655148,6.56547892017251,10.3408766839389,25.6503136234269,16.3174265769249,19.9918930533488,7.01715351074956,9.63011542322501,7.53473828018764,10.3887613067979,9.37990510146743,0.849892149969277,1.6794174278839,0.967399816630967,7.63736494412091,4.74503990371703,3.45643094115643,10.5845234005365,10.8725913927524,16.3771922809633,9.03591120778299,8.01738520535759,28.5313976762592,12.7022673825957,18.0188400795208,86.2450196186811,7.027277664067,10.7548018797113,6.80579159204167,10.4619457016962,6.58928889414035,11.2662949099924,6.64042362704146,6.08184197669123,8.93861247056222,6.91272015018877,7.58426689507628,20.0697963137263,14.1741120887462,11.8227948909793,4.47566739168704,4.37098980518783,5.52899067791857,3.69223817936443,5.65412119709627,6.09654453239999,6.04957110821043,4.28814675254911,6.06134602334076,5.72696820689688,10.6563280299149,19.3127779435436,14.1747893442972,17.9636539509564,7.34120457322324,10.5102186252662,8.79127796482872,12.6477343656649,13.0408747049194,16.942555278512,29.9211403729665,45.2587455617123,58.6019351791975,54.8066015816514,43.8128460486026,39.8263275136765,29.7211994127986,34.4388230827996,35.7254615108756,9.3408612825759,6.3843979744165,5.80494259564056,5.34834777550247,14.4633082213308,44.4901290449034,30.0033082532181,21.2216108956061,23.4271023002025,28.5547849293091,28.6431608875971,17.1649970661329,35.3964898236156,25.6100609619477,20.791639761932,20.4806287251722,18.3097234992872,22.5703787942535,26.7855835522149,14.7198920134397,43.8872643053332,37.8023467119389,31.4735770730464,20.2031519118937,15.1516102468682,22.761329522861,21.2196448532416,22.3609254722166,36.2596983968451,20.2011217796786,15.5411873742668,23.3455623230085,23.3261694606723,25.0997682721265,7.52335782826451,11.7410971630835,8.65546951248011,8.37997110788363,11.8598765882683,9.04424818390014,19.4768981921154 | |phase1_expression=5.12476310735341,4.18770489167233,8.18998630901165,113.726543451368,107.692581938465,3.86122325397347,27.3326789496765,14.8491821957813,12.8117737158017,17.3207749478275,3.93801326918661,5.2649624936922,10.2720437958723,9.44140346125172,37.9745128469855,11.1361397064404,32.1798463938947,9.14840279538889,9.87223921961319,33.1023928402464,18.8796104135375,7.14894848646374,2.08959831311148,8.95957567643077,13.7645568640302,10.9104073181854,5.59990595006797,2.58565479223067,14.251756459228,3.52842181663903,1.55211357458713,71.1234354274787,47.9750534315965,158.481681015439,4.62162591602039,2.99222361645286,1.83752420636132,2.09265815368454,0.7813353445238,3.14114246384279,5.29408339227913,8.87959130445979,5.82612423637384,11.330713617802,8.71841608487825,6.60768307782054,164.302182313088,28.7793206422189,39.3238267094705,38.3026901176338,62.153971201661,139.439987434022,7.3824346665404,27.5637613964311,12.4354705682712,9.26133969729409,20.9169411155292,27.3306208907044,24.2779753031517,28.0365219014177,53.8756692980252,60.6531712403746,54.2469825627795,110.687665225612,190.851207975426,162.699946322657,131.52444851758,80.6858441175265,21.8785081970888,32.6714370762691,24.8183454394631,34.2781181284564,28.4920417827581,18.3736198822431,27.5076501822338,45.960939330501,133.24021600926,34.9863306353414,41.3201574459295,21.101806036831,20.5847198105422,23.962015045611,49.9737568212472,93.9813558752905,41.7139216430692,56.5686884109442,25.9116459054367,20.5039390407831,7.34544075331885,6.95258352982427,30.1459068249745,94.6466264679525,116.275098064025,159.212441533156,178.688514798109,95.8777538388298,17.9768857768642,10.9075406449957,39.4874726996361,20.8470348961101,2.95771181531029,62.8799739330157,132.498724647456,270.205347198266,13.2059535016841,10.1343946190039,7.58286667522175,47.2721262036908,7.76813650941515,6.38301197978747,24.1144604204929,28.6197549613413,15.681853813412,12.5099791658677,9.64227398512779,11.9383261763192,12.8541383221874,14.0261376212314,16.8076004870476,9.38247729694973,7.72945314611377,14.5462575940567,11.1835056730873,4.9772735491963,31.4170060220183,24.0129631896076,1.31796636956512,0,0.889491589511453,10.3355541189328,10.0650132620098,6.91098936620754,15.4703644971126,9.97290283588289,11.6361304953354,12.1680947300818,10.3876151127323,12.1918831197891,9.35074206204597,9.25944165900485,8.71806967850115,9.19608417733892,6.66229880279792,11.9056806090215,13.1990808353576,4.35586648968489,6.46541899462129,14.7460921321239,5.17363183038821,6.61871280587367,9.85326295318113,6.57587197282724,23.0779216857246,2.089512999133,9.26019613835746,15.9227413454795,0,0,5.96743348730745,5.79952163099405,20.1692411583743,26.4691230347692,6.15536312521547,10.6252685143598,11.1072321278912,12.0917651270212,7.51165523918934,9.10769670463922,6.91151369636618,12.3125598059321,9.40398190731926,11.2573990317506,11.4166059951346,15.4337381574428,15.1408762966172,8.02655976558419,29.407271685558,12.6936271998501,7.89166526980366,15.3276203427889,4.25262622362908,9.27744213267376,2.89091456998331,2.47293313946327,77.3482370317554,9.71723832871664,13.8234364840148,14.3248659869629,9.55324026883689,50.3338868846364,15.7780776408527,12.5459002150251,6.82804443431094,10.1681176222659,9.01661885384643,8.34970444165788,8.53390943537553,6.73303870947058,6.5133633237985,9.44704947069454,9.57692239832386,11.9695249004147,32.9062416066735,4.83850806576673,3.34150291692445,0.899448449539415,5.68008339887808,5.54707467430559,11.2035374783825,9.20627639842594,21.4018499343047,11.5315793538994,309.101644033812,16.7463426450827,24.3389385029357,13.3866805311969,17.7603439386693,25.5695066322585,15.888774354328,10.2325362356062,7.65935389277522,25.4617628662782,8.21415869009757,2.68010011906905,4.28478553594825,9.95181604074774,5.83250033192907,11.5161638617363,5.26200736569707,25.3988137809394,12.4333186943445,15.1881511510587,52.7769493787453,105.51770266083,7.86822836830458,6.62248191131358,15.2523060488402,10.9006868530749,43.934565360949,28.5292147740941,43.8556424988597,55.4423016901227,34.4677436372478,37.5181012785507,32.7514050901119,45.575321457002,39.2666380624648,40.9158201075837,47.4345333535828,8.67567554338879,6.24536374916382,14.4233138970477,7.16702621155735,9.56826713240706,88.9392426877751,25.0064055239631,6.65111825322452,10.5618844663303,9.15435867930396,13.2197113615889,14.9888410037568,16.7225515559653,18.1813662976208,13.5895805912401,99.0934920604988,75.2889465711764,17.702859499197,13.324520958317,20.4386720376752,24.8630960636647,6.0295679438373,19.2638323010236,20.0749805134588,68.8090784998994,6.10146440965647,15.2519091021951,23.155481795771,32.1528193235886,9.52640117505843,2.89502039655148,6.56547892017251,10.3408766839389,25.6503136234269,16.3174265769249,19.9918930533488,7.01715351074956,9.63011542322501,7.53473828018764,10.3887613067979,9.37990510146743,0.849892149969277,1.6794174278839,0.967399816630967,7.63736494412091,4.74503990371703,3.45643094115643,10.5845234005365,10.8725913927524,16.3771922809633,9.03591120778299,8.01738520535759,28.5313976762592,12.7022673825957,18.0188400795208,86.2450196186811,7.027277664067,10.7548018797113,6.80579159204167,10.4619457016962,6.58928889414035,11.2662949099924,6.64042362704146,6.08184197669123,8.93861247056222,6.91272015018877,7.58426689507628,20.0697963137263,14.1741120887462,11.8227948909793,4.47566739168704,4.37098980518783,5.52899067791857,3.69223817936443,5.65412119709627,6.09654453239999,6.04957110821043,4.28814675254911,6.06134602334076,5.72696820689688,10.6563280299149,19.3127779435436,14.1747893442972,17.9636539509564,7.34120457322324,10.5102186252662,8.79127796482872,12.6477343656649,13.0408747049194,16.942555278512,29.9211403729665,45.2587455617123,58.6019351791975,54.8066015816514,43.8128460486026,39.8263275136765,29.7211994127986,34.4388230827996,35.7254615108756,9.3408612825759,6.3843979744165,5.80494259564056,5.34834777550247,14.4633082213308,44.4901290449034,30.0033082532181,21.2216108956061,23.4271023002025,28.5547849293091,28.6431608875971,17.1649970661329,35.3964898236156,25.6100609619477,20.791639761932,20.4806287251722,18.3097234992872,22.5703787942535,26.7855835522149,14.7198920134397,43.8872643053332,37.8023467119389,31.4735770730464,20.2031519118937,15.1516102468682,22.761329522861,21.2196448532416,22.3609254722166,36.2596983968451,20.2011217796786,15.5411873742668,23.3455623230085,23.3261694606723,25.0997682721265,7.52335782826451,11.7410971630835,8.65546951248011,8.37997110788363,11.8598765882683,9.04424818390014,19.4768981921154 | ||
|short_description=p2@ENSMUST00000175336 | |short_description=p2@ENSMUST00000175336 | ||
}} | }} |
Latest revision as of 01:37, 4 August 2015
Short description: | p2@ENSMUST00000175336 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000175336_5end |
Coexpression cluster: | MCL_coexpression_mm9:1400 |
Association with transcript: | 0bp_to_ENSMUST00000175336_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.79e-12 | 43 |
ectodermal cell | 1.62e-11 | 44 |
neurectodermal cell | 1.62e-11 | 44 |
embryonic cell | 1.99e-10 | 70 |
neuron | 5.40e-10 | 33 |
neuronal stem cell | 5.40e-10 | 33 |
neuroblast | 5.40e-10 | 33 |
electrically signaling cell | 5.40e-10 | 33 |
electrically responsive cell | 2.13e-08 | 39 |
electrically active cell | 2.13e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.02e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.13e-13 | 73 |
nervous system | 1.17e-12 | 75 |
regional part of nervous system | 1.84e-08 | 54 |
gray matter | 1.45e-07 | 34 |
ectoderm-derived structure | 1.50e-07 | 95 |
ectoderm | 1.50e-07 | 95 |
presumptive ectoderm | 1.50e-07 | 95 |
neural tube | 2.33e-07 | 52 |
neural rod | 2.33e-07 | 52 |
future spinal cord | 2.33e-07 | 52 |
neural keel | 2.33e-07 | 52 |