FFCP PHASE1:Mm9::chr16:92499010..92499069,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2189 | |MCL_coexpression_id=2189 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:92499010..92499069,+ | |||
|description=CAGE_peak_at_chr16:92499010..92499069,+ | |description=CAGE_peak_at_chr16:92499010..92499069,+ | ||
|id=chr16:92499010..92499069,+ | |id=chr16:92499010..92499069,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.32e-20!59;UBERON:0000160!1.53e-20!43;UBERON:0002108!1.15e-09!16;UBERON:0004119!1.31e-09!130;UBERON:0000925!1.31e-09!130;UBERON:0006595!1.31e-09!130;UBERON:0001007!2.29e-09!128;UBERON:0001555!2.29e-09!128;UBERON:0007026!2.29e-09!128;UBERON:0004921!1.04e-08!126;UBERON:0004185!1.04e-08!126;UBERON:0001045!1.82e-08!13;UBERON:0001264!3.23e-08!12;UBERON:0003922!3.23e-08!12;UBERON:0002114!3.23e-08!12;UBERON:0003923!3.23e-08!12;UBERON:0003924!3.23e-08!12;UBERON:0003921!3.23e-08!12;UBERON:0005178!3.18e-07!17;UBERON:0005181!3.18e-07!17;UBERON:0002224!3.18e-07!17;UBERON:0000915!3.18e-07!17;UBERON:0008947!3.18e-07!17;UBERON:0003258!3.18e-07!17;UBERON:0000481!3.90e-07!230;UBERON:0000464!4.46e-07!57 | |ontology_enrichment_uberon=UBERON:0005409!1.32e-20!59;UBERON:0000160!1.53e-20!43;UBERON:0002108!1.15e-09!16;UBERON:0004119!1.31e-09!130;UBERON:0000925!1.31e-09!130;UBERON:0006595!1.31e-09!130;UBERON:0001007!2.29e-09!128;UBERON:0001555!2.29e-09!128;UBERON:0007026!2.29e-09!128;UBERON:0004921!1.04e-08!126;UBERON:0004185!1.04e-08!126;UBERON:0001045!1.82e-08!13;UBERON:0001264!3.23e-08!12;UBERON:0003922!3.23e-08!12;UBERON:0002114!3.23e-08!12;UBERON:0003923!3.23e-08!12;UBERON:0003924!3.23e-08!12;UBERON:0003921!3.23e-08!12;UBERON:0005178!3.18e-07!17;UBERON:0005181!3.18e-07!17;UBERON:0002224!3.18e-07!17;UBERON:0000915!3.18e-07!17;UBERON:0008947!3.18e-07!17;UBERON:0003258!3.18e-07!17;UBERON:0000481!3.90e-07!230;UBERON:0000464!4.46e-07!57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.64e-18,47;UBERON:0000160,5.37e-16,31;UBERON:0001264,4.75e-11,12;UBERON:0004119,7.24e-09,118;UBERON:0000925,7.24e-09,118;UBERON:0006595,7.24e-09,118;UBERON:0001007,7.68e-09,116;UBERON:0001555,7.68e-09,116;UBERON:0007026,7.68e-09,116;UBERON:0005178,8.07e-09,17;UBERON:0005181,8.07e-09,17;UBERON:0002224,8.07e-09,17;UBERON:0000915,8.07e-09,17;UBERON:0008947,8.07e-09,17;UBERON:0003258,8.07e-09,17;UBERON:0004921,4.62e-08,114;UBERON:0002048,2.80e-07,14;UBERON:0000117,2.80e-07,14;UBERON:0000171,2.80e-07,14;UBERON:0000170,2.80e-07,14;UBERON:0005597,2.80e-07,14;UBERON:0000118,2.80e-07,14 | |||
|phase1_expression=1.28119077683835,0,0,0.30246421130683,0.500895729946347,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,2.23989391910769,3.44113921600755,1.72269589234506,0.430761996159075,0.861884930743556,3.42042155021473,2.77233142735924,0.886922042621219,0,0,0,19.0642069035841,19.4494535069436,21.029443695024,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0,0,0,0,2.25105044012672,0.45839474333043,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,5.21120653173718,0,0,0,2.16491041011214,2.53359865475099,2.52762222507392,0.79928715803342,0,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.376999773989026,3.95511948374998,0,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,5.36459815938042,0,0,0,0.748953197024114,8.6925114535539,1.25654352112864,0.869121600961382,1.27857728665165,2.28566849015516,4.70499662896497,1.62942982160506,0.746441823660558,0.505445516867349,0.210441855886474,0.910843100738926,0.919608417733892,0.540186389416048,0.60281927134286,0.612328492361951,0.768682321709099,0.187403449119458,1.55222022443409,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.630869845692382,0.823236899034275,0.991256348951394,3.43785736662608,1.70630600428187,3.48355007790658,7.47431275668141,12.5043785266472,11.1189021922435,11.7939888189787,7.11793592316767,9.38784041926862,13.3207660664143,12.7332142106337,14.0374142725766,3.59527763461689,9.07779809473716,6.37252074413975,0.758671603812327,0.799739588268102,0,1.4255592949172,2.32742984601151,1.05203729835478,3.16182685621286,3.39503340353085,2.98297582898612,2.22114895059241,0,0.166845105716094,0.982794975566015,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,3.51031061316549,0.757965647081939,2.11854469374634,3.90413697282933,3.98973422090454,2.84760637651087,3.09456733151818,3.51240566144038,2.04925687338048,1.10732344824387,1.2756381492599,1.96635977658886,2.07221978239075,2.4590339958857,0,0,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.162886959353576,2.14461159864296,3.98235415019888,5.58395463156457,4.53485335447127,6.03536255218874,2.06711325016541,6.14870295887855,4.65170927702798,7.27067458955011,8.19943970284859,3.47640433729398,4.21674434299995,7.21948802737308,0,3.42116078659489,3.62204314591713,1.50035924522115,1.24138163549592,1.78368817602071,1.81003922662333,3.04464949114599,1.17335854031855,0.42366414172764,0,0,0,0.120625849856312,0,0,8.45294426226567,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0,4.77335309007557,1.26534397432454,3.25311147402958,3.88819226958485,2.29997125615916,4.36725127492355,2.69728692769641,3.2234847732881,3.66458318777641,2.33306951925227,1.24267862617385,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,1.17183946359555,1.57289016638566,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.358855426437903,1.34307693091263,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,1.10306105070008,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,1.21733959710847,1.47257850531199,1.09127391015665,0.476293691283074,0.347652977834566,0.964546102318525,1.64834360321323,0.735994600671987,0.342869252385415,1.24233064311536,0.238436189947321,0.872078499793971,0.941093804153306,0.676916863133412,0.914639864363863,1.31534855718921,1.49384525230448,2.80571135828869,1.66089025373844,1.18205378850676,0.409231043169689,1.70430525304563,1.15743966588685,0.999242311751784,0.701794825336225,1.28922632428979,0,0.220591419119515,0 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|phase1_expression=1.28119077683835,0,0,0.30246421130683,0.500895729946347,3.18970616632591,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,2.23989391910769,3.44113921600755,1.72269589234506,0.430761996159075,0.861884930743556,3.42042155021473,2.77233142735924,0.886922042621219,0,0,0,19.0642069035841,19.4494535069436,21.029443695024,0,0,0,0,0,0,0,0,0,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0,0,0,0,2.25105044012672,0.45839474333043,0,0.142371680799103,0,0,0,0.869593466105033,0,0,0,0,0,0.983110940922263,0,0,0,5.21120653173718,0,0,0,2.16491041011214,2.53359865475099,2.52762222507392,0.79928715803342,0,0.29688427812965,0,0.304465478312141,0,0,0.117588707135705,0.376999773989026,3.95511948374998,0,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,5.36459815938042,0,0,0,0.748953197024114,8.6925114535539,1.25654352112864,0.869121600961382,1.27857728665165,2.28566849015516,4.70499662896497,1.62942982160506,0.746441823660558,0.505445516867349,0.210441855886474,0.910843100738926,0.919608417733892,0.540186389416048,0.60281927134286,0.612328492361951,0.768682321709099,0.187403449119458,1.55222022443409,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0.540186184383045,0.473489471170421,0.590292695242212,0.154267112887378,0.465067889500816,0.536546802799238,0.583826711835847,0.329119699826961,0.164167464079095,0.162137619091711,0,0,0.268412837520744,0.630869845692382,0.823236899034275,0.991256348951394,3.43785736662608,1.70630600428187,3.48355007790658,7.47431275668141,12.5043785266472,11.1189021922435,11.7939888189787,7.11793592316767,9.38784041926862,13.3207660664143,12.7332142106337,14.0374142725766,3.59527763461689,9.07779809473716,6.37252074413975,0.758671603812327,0.799739588268102,0,1.4255592949172,2.32742984601151,1.05203729835478,3.16182685621286,3.39503340353085,2.98297582898612,2.22114895059241,0,0.166845105716094,0.982794975566015,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0,3.51031061316549,0.757965647081939,2.11854469374634,3.90413697282933,3.98973422090454,2.84760637651087,3.09456733151818,3.51240566144038,2.04925687338048,1.10732344824387,1.2756381492599,1.96635977658886,2.07221978239075,2.4590339958857,0,0,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,1.24645922567079,0.162886959353576,2.14461159864296,3.98235415019888,5.58395463156457,4.53485335447127,6.03536255218874,2.06711325016541,6.14870295887855,4.65170927702798,7.27067458955011,8.19943970284859,3.47640433729398,4.21674434299995,7.21948802737308,0,3.42116078659489,3.62204314591713,1.50035924522115,1.24138163549592,1.78368817602071,1.81003922662333,3.04464949114599,1.17335854031855,0.42366414172764,0,0,0,0.120625849856312,0,0,8.45294426226567,0.18542530201051,0,0.412773735926445,0,0,0,0,0,0,0,4.77335309007557,1.26534397432454,3.25311147402958,3.88819226958485,2.29997125615916,4.36725127492355,2.69728692769641,3.2234847732881,3.66458318777641,2.33306951925227,1.24267862617385,0.56369293868419,0,0,0.194451188344048,0.129159823477731,0,0.234714477291508,1.17183946359555,1.57289016638566,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.358855426437903,1.34307693091263,0,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.729320151204882,0.419226325255965,1.10306105070008,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,1.21733959710847,1.47257850531199,1.09127391015665,0.476293691283074,0.347652977834566,0.964546102318525,1.64834360321323,0.735994600671987,0.342869252385415,1.24233064311536,0.238436189947321,0.872078499793971,0.941093804153306,0.676916863133412,0.914639864363863,1.31534855718921,1.49384525230448,2.80571135828869,1.66089025373844,1.18205378850676,0.409231043169689,1.70430525304563,1.15743966588685,0.999242311751784,0.701794825336225,1.28922632428979,0,0.220591419119515,0 | ||
|short_description=p@chr16:92499010..92499069,+ | |short_description=p@chr16:92499010..92499069,+ | ||
}} | }} |
Latest revision as of 05:17, 4 August 2015
Short description: | p@chr16:92499010..92499069, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:92499010..92499069, + |
Coexpression cluster: | MCL_coexpression_mm9:2189 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 5.64e-18 | 47 |
intestine | 5.37e-16 | 31 |
pancreas | 4.75e-11 | 12 |
endoderm-derived structure | 7.24e-09 | 118 |
endoderm | 7.24e-09 | 118 |
presumptive endoderm | 7.24e-09 | 118 |
digestive system | 7.68e-09 | 116 |
digestive tract | 7.68e-09 | 116 |
primitive gut | 7.68e-09 | 116 |
thoracic cavity element | 8.07e-09 | 17 |
thoracic segment organ | 8.07e-09 | 17 |
thoracic cavity | 8.07e-09 | 17 |
thoracic segment of trunk | 8.07e-09 | 17 |
respiratory primordium | 8.07e-09 | 17 |
endoderm of foregut | 8.07e-09 | 17 |
subdivision of digestive tract | 4.62e-08 | 114 |
lung | 2.80e-07 | 14 |
respiratory tube | 2.80e-07 | 14 |
respiration organ | 2.80e-07 | 14 |
pair of lungs | 2.80e-07 | 14 |
lung primordium | 2.80e-07 | 14 |
lung bud | 2.80e-07 | 14 |