FFCP PHASE1:Mm9::chr3:90418333..90418337,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:90418333..90418337,- | |||
|description=CAGE_peak_at_chr3:90418333..90418337,- | |description=CAGE_peak_at_chr3:90418333..90418337,- | ||
|id=chr3:90418333..90418337,- | |id=chr3:90418333..90418337,- | ||
|ontology_enrichment_celltype=CL:0000355!8.42e-19!9;CL:0000680!4.31e-11!6;CL:0000183!4.31e-11!6;CL:0000187!4.31e-11!6;CL:0000056!4.31e-11!6;CL:0000068!3.40e-10!3;CL:0002202!3.40e-10!3;CL:0000069!3.40e-10!3;CL:0002632!3.40e-10!3;CL:0002368!3.40e-10!3;CL:0000307!3.40e-10!3;CL:0000377!3.40e-10!3;CL:0000222!1.82e-09!7;CL:0000192!2.91e-08!3;CL:0000359!2.91e-08!3;CL:0002539!2.91e-08!3;CL:0000514!2.91e-08!3;CL:0002371!1.18e-07!118;CL:0000144!2.42e-07!121;CL:0000012!2.42e-07!121 | |ontology_enrichment_celltype=CL:0000355!8.42e-19!9;CL:0000680!4.31e-11!6;CL:0000183!4.31e-11!6;CL:0000187!4.31e-11!6;CL:0000056!4.31e-11!6;CL:0000068!3.40e-10!3;CL:0002202!3.40e-10!3;CL:0000069!3.40e-10!3;CL:0002632!3.40e-10!3;CL:0002368!3.40e-10!3;CL:0000307!3.40e-10!3;CL:0000377!3.40e-10!3;CL:0000222!1.82e-09!7;CL:0000192!2.91e-08!3;CL:0000359!2.91e-08!3;CL:0002539!2.91e-08!3;CL:0000514!2.91e-08!3;CL:0002371!1.18e-07!118;CL:0000144!2.42e-07!121;CL:0000012!2.42e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20;CL:0000355,2.54e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.46e-09!3;DOID:4045!1.46e-09!3 | |ontology_enrichment_disease=DOID:0060100!1.46e-09!3;DOID:4045!1.46e-09!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.06e-20,3;DOID:4045,6.06e-20,3;DOID:0050686,1.66e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!8.42e-19!9;UBERON:0002036!8.42e-19!9;UBERON:0002385!8.42e-19!9;UBERON:0000486!8.42e-19!9;UBERON:0001015!8.42e-19!9;UBERON:0004290!8.42e-19!9;UBERON:0003082!8.42e-19!9;UBERON:0000383!8.61e-17!10;UBERON:0002329!3.80e-15!11;UBERON:0003077!3.80e-15!11;UBERON:0003059!3.80e-15!11;UBERON:0007282!3.80e-15!11;UBERON:0009618!3.80e-15!11;UBERON:0007285!3.80e-15!11;UBERON:0003126!3.40e-10!3;UBERON:0001005!3.40e-10!3;UBERON:0007196!3.40e-10!3;UBERON:0001558!3.40e-10!3;UBERON:0000914!2.43e-09!17;UBERON:0001135!2.91e-08!3;UBERON:0004237!2.91e-08!3;UBERON:0004695!2.91e-08!3;UBERON:0002111!2.91e-08!3;UBERON:0004178!2.91e-08!3;UBERON:0002204!4.99e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17;UBERON:0001134,2.54e-07,9;UBERON:0002036,2.54e-07,9;UBERON:0002385,2.54e-07,9;UBERON:0000486,2.54e-07,9;UBERON:0007503,2.54e-07,9;UBERON:0001015,2.54e-07,9;UBERON:0002329,2.54e-07,9;UBERON:0003082,2.54e-07,9;UBERON:0003059,2.54e-07,9;UBERON:0007282,2.54e-07,9;UBERON:0004290,2.54e-07,9;UBERON:0009618,2.54e-07,9 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,2.3440060335714,2.09409497589519,2.35292595212406,0.683045484958446,0.971020706062307,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,11.0410430915719,7.60079596425296,13.6491600153991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,2.3440060335714,2.09409497589519,2.35292595212406,0.683045484958446,0.971020706062307,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0.85960031981627,0.515672092277442,0,0,0,0.677689064138264,0,0,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,11.0410430915719,7.60079596425296,13.6491600153991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:90418333..90418337,- | |short_description=p@chr3:90418333..90418337,- | ||
}} | }} |
Latest revision as of 06:13, 4 August 2015
Short description: | p@chr3:90418333..90418337, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:90418333..90418337, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-44 | 3 |
branched duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of lower respiratory tract | 1.18e-44 | 3 |
respiratory epithelial cell | 1.18e-44 | 3 |
tracheal epithelial cell | 1.18e-44 | 3 |
tracheoblast | 1.18e-44 | 3 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 2.26e-07 | 20 |
multi-potent skeletal muscle stem cell | 2.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.18e-44 | 3 |
respiratory airway | 1.18e-44 | 3 |
tracheobronchial tree | 1.18e-44 | 3 |
lower respiratory tract | 1.18e-44 | 3 |
thoracic cavity element | 1.48e-08 | 17 |
thoracic segment organ | 1.48e-08 | 17 |
thoracic cavity | 1.48e-08 | 17 |
thoracic segment of trunk | 1.48e-08 | 17 |
respiratory primordium | 1.48e-08 | 17 |
endoderm of foregut | 1.48e-08 | 17 |
skeletal muscle tissue | 2.54e-07 | 9 |
striated muscle tissue | 2.54e-07 | 9 |
muscle tissue | 2.54e-07 | 9 |
multilaminar epithelium | 2.54e-07 | 9 |
epithelial vesicle | 2.54e-07 | 9 |
musculature | 2.54e-07 | 9 |
somite | 2.54e-07 | 9 |
myotome | 2.54e-07 | 9 |
presomitic mesoderm | 2.54e-07 | 9 |
presumptive segmental plate | 2.54e-07 | 9 |
dermomyotome | 2.54e-07 | 9 |
trunk paraxial mesoderm | 2.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.06e-20 | 3 |
muscle cancer | 6.06e-20 | 3 |
organ system cancer | 1.66e-10 | 6 |