FFCP PHASE1:Mm9::chr7:134950531..134950548,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:134950531..134950548,-
|short_description=p@chr7:134950531..134950548,-
|description=CAGE_peak_at_chr7:134950531..134950548,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:134950531..134950548,- | |||
|description=CAGE_peak_at_chr7:134950531..134950548,- | |||
|id=chr7:134950531..134950548,- | |||
|ontology_enrichment_celltype=CL:0000117!1.25e-14!23;CL:0000337!1.25e-14!23;CL:0000540!8.87e-10!33;CL:0000047!8.87e-10!33;CL:0000031!8.87e-10!33;CL:0000404!8.87e-10!33;CL:0000221!9.29e-09!44;CL:0000133!9.29e-09!44;CL:0002319!3.27e-08!43;CL:0000393!1.81e-07!39;CL:0000211!1.81e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.16e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.85e-26!73;UBERON:0005743!6.85e-26!73;UBERON:0001049!3.29e-25!52;UBERON:0005068!3.29e-25!52;UBERON:0006241!3.29e-25!52;UBERON:0007135!3.29e-25!52;UBERON:0000073!7.80e-25!75;UBERON:0001016!7.80e-25!75;UBERON:0000955!5.53e-24!50;UBERON:0006238!5.53e-24!50;UBERON:0002616!6.93e-23!49;UBERON:0000033!3.33e-20!63;UBERON:0002346!7.29e-20!71;UBERON:0003075!7.29e-20!71;UBERON:0007284!7.29e-20!71;UBERON:0002020!5.84e-19!34;UBERON:0004121!2.39e-18!102;UBERON:0000924!2.39e-18!102;UBERON:0006601!2.39e-18!102;UBERON:0003080!3.63e-16!40;UBERON:0002780!3.76e-15!39;UBERON:0001890!3.76e-15!39;UBERON:0006240!3.76e-15!39;UBERON:0002791!3.95e-14!29;UBERON:0003528!3.95e-14!29;UBERON:0001893!3.95e-14!29;UBERON:0003056!8.80e-14!49;UBERON:0007811!8.14e-12!86;UBERON:0000153!1.14e-10!94;UBERON:0003076!4.88e-10!12;UBERON:0003057!4.88e-10!12;UBERON:0000956!2.40e-08!21;UBERON:0001869!2.40e-08!21;UBERON:0000203!2.40e-08!21;UBERON:0000025!1.26e-07!114;UBERON:0002420!1.42e-07!8;UBERON:0007245!1.42e-07!8;UBERON:0010009!1.42e-07!8;UBERON:0010011!1.42e-07!8;UBERON:0000454!1.42e-07!8;UBERON:0004111!1.43e-07!122;UBERON:0002240!2.52e-07!6;UBERON:0005174!2.52e-07!6;UBERON:0001137!2.52e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,7.46e-14,6;UBERON:0004732,7.46e-14,6;UBERON:0002028,7.46e-14,6;UBERON:0007277,7.46e-14,6;UBERON:0004684,3.16e-12,3;UBERON:0002275,3.16e-12,3;UBERON:0001851,3.04e-10,1;UBERON:0005889,3.04e-10,1;UBERON:0000073,5.11e-10,54;UBERON:0002037,6.92e-10,4;UBERON:0002680,6.92e-10,4;UBERON:0001895,6.92e-10,4;UBERON:0010092,6.92e-10,4;UBERON:0006215,6.92e-10,4;UBERON:0001017,2.77e-07,73;UBERON:0003076,3.18e-07,12;UBERON:0003057,3.18e-07,12;UBERON:0001016,4.47e-07,75;UBERON:0002616,7.89e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,0,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.0958454710182364,0,1.10115880999389,0.766124028511126,1.0752457327937,0.131886287730194,0.548925861614458,0.52091337055676,0.837548997004143,0,0.45839474333043,0.294628585473668,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,10.0534419270458,0,0,0,0,0.748953197024114,1.37250180845588,0.376963056338593,0.521472960576829,1.53429274398198,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,0.820481806145422,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.859265911718438,0.685082519770642,2.2661816921691,0,0,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,0,0.210324961351382,0.285650984403804,0.441737081903227,0.489963196859816,0.0958454710182364,0,1.10115880999389,0.766124028511126,1.0752457327937,0.131886287730194,0.548925861614458,0.52091337055676,0.837548997004143,0,0.45839474333043,0.294628585473668,0.427115042397309,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,10.0534419270458,0,0,0,0,0.748953197024114,1.37250180845588,0.376963056338593,0.521472960576829,1.53429274398198,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.617427674275707,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.12385412991454,0.820481806145422,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0.460325236507177,0,0.859265911718438,0.685082519770642,2.2661816921691,0,0,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr7:134950531..134950548,- | |||
}} | }} |
Latest revision as of 07:36, 4 August 2015
Short description: | p@chr7:134950531..134950548, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:134950531..134950548, - |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.16e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 7.46e-14 | 6 |
segmental subdivision of nervous system | 7.46e-14 | 6 |
hindbrain | 7.46e-14 | 6 |
presumptive hindbrain | 7.46e-14 | 6 |
raphe nuclei | 3.16e-12 | 3 |
reticular formation | 3.16e-12 | 3 |
cortex | 3.04e-10 | 1 |
zygote cortex | 3.04e-10 | 1 |
regional part of nervous system | 5.11e-10 | 54 |
cerebellum | 6.92e-10 | 4 |
regional part of metencephalon | 6.92e-10 | 4 |
metencephalon | 6.92e-10 | 4 |
future metencephalon | 6.92e-10 | 4 |
rhombic lip | 6.92e-10 | 4 |
central nervous system | 2.77e-07 | 73 |
posterior neural tube | 3.18e-07 | 12 |
chordal neural plate | 3.18e-07 | 12 |
nervous system | 4.47e-07 | 75 |
regional part of brain | 7.89e-07 | 46 |