FFCP PHASE1:Mm9::chr3:95540093..95540105,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:95540093..95540105,+ | |||
|description=CAGE_peak_at_chr3:95540093..95540105,+ | |description=CAGE_peak_at_chr3:95540093..95540105,+ | ||
|id=chr3:95540093..95540105,+ | |id=chr3:95540093..95540105,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.17e-38,3;CL:0002202,1.17e-38,3;CL:0000069,1.17e-38,3;CL:0002632,1.17e-38,3;CL:0002368,1.17e-38,3;CL:0000307,1.17e-38,3;CL:0000377,1.17e-38,3;CL:0000057,8.69e-14,1;CL:0000632,8.69e-14,1;CL:0002076,2.43e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.83e-08!47;UBERON:0000926!3.66e-07!193;UBERON:0004120!3.66e-07!193;UBERON:0006603!3.66e-07!193;UBERON:0002100!7.48e-07!98;UBERON:0003064!8.51e-07!14;UBERON:0009569!9.89e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.17e-38,3;UBERON:0001005,1.17e-38,3;UBERON:0007196,1.17e-38,3;UBERON:0001558,1.17e-38,3;UBERON:0001723,1.16e-13,1;UBERON:0001033,1.16e-13,1;UBERON:0010056,1.16e-13,1;UBERON:0000072,5.74e-08,27;UBERON:0003103,1.35e-07,43;UBERON:0000165,1.76e-07,2;UBERON:0000166,1.76e-07,2;UBERON:0000930,1.76e-07,2;UBERON:0005178,1.96e-07,17;UBERON:0005181,1.96e-07,17;UBERON:0002224,1.96e-07,17;UBERON:0000915,1.96e-07,17;UBERON:0008947,1.96e-07,17;UBERON:0003258,1.96e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,0.218025156380447,0.659058548203415,0,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.302904773332736,0.226714680320357,0,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,6.061749148314,8.36087556067825,4.04419556011827,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,1.05505848386836,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0.734187008646726,0,0.218025156380447,0.659058548203415,0,0.139986421625363,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0.338844532069132,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0.302904773332736,0.226714680320357,0,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0.140444420131752,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,6.061749148314,8.36087556067825,4.04419556011827,0,0,0.29688427812965,0.173485326766136,0.304465478312141,0.230615497256059,1.05505848386836,0.352766121407114,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.442830443938806,0.31399745568275,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0.238043640886014,0.585400943573396,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0.19318959403219,0.187682475451182,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr3:95540093..95540105,+ | |short_description=p@chr3:95540093..95540105,+ | ||
}} | }} |
Latest revision as of 08:44, 4 August 2015
Short description: | p@chr3:95540093..95540105, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95540093..95540105, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.17e-38 | 3 |
epithelial cell of tracheobronchial tree | 1.17e-38 | 3 |
branched duct epithelial cell | 1.17e-38 | 3 |
epithelial cell of lower respiratory tract | 1.17e-38 | 3 |
respiratory epithelial cell | 1.17e-38 | 3 |
tracheal epithelial cell | 1.17e-38 | 3 |
tracheoblast | 1.17e-38 | 3 |
fibroblast | 8.69e-14 | 1 |
hepatic stellate cell | 8.69e-14 | 1 |
endo-epithelial cell | 2.43e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.17e-38 | 3 |
respiratory airway | 1.17e-38 | 3 |
tracheobronchial tree | 1.17e-38 | 3 |
lower respiratory tract | 1.17e-38 | 3 |
tongue | 1.16e-13 | 1 |
gustatory system | 1.16e-13 | 1 |
future tongue | 1.16e-13 | 1 |
segment of respiratory tract | 5.74e-08 | 27 |
compound organ | 1.35e-07 | 43 |
mouth | 1.76e-07 | 2 |
oral opening | 1.76e-07 | 2 |
stomodeum | 1.76e-07 | 2 |
thoracic cavity element | 1.96e-07 | 17 |
thoracic segment organ | 1.96e-07 | 17 |
thoracic cavity | 1.96e-07 | 17 |
thoracic segment of trunk | 1.96e-07 | 17 |
respiratory primordium | 1.96e-07 | 17 |
endoderm of foregut | 1.96e-07 | 17 |