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FFCP PHASE1:Mm9::chr5:53225353..53225406,+: Difference between revisions

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{{FFCP|EntrezGene=52206|HGNC=|UniProt=D6RDT6,Q3TM92,Q91W96|association_with_transcript=0bp_to_ENSMUST00000144574,NM_024213,uc008xkw.1,uc008xkx.1_5end|description=CAGE_peak_1_at_Anapc4_5end|id=chr5:53225353..53225406,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.38e-08!193;UBERON:0004120!3.38e-08!193;UBERON:0006603!3.38e-08!193;UBERON:0005178!8.74e-08!17;UBERON:0005181!8.74e-08!17;UBERON:0002224!8.74e-08!17;UBERON:0000915!8.74e-08!17;UBERON:0008947!8.74e-08!17;UBERON:0003258!8.74e-08!17;UBERON:0002329!3.28e-07!11;UBERON:0003077!3.28e-07!11;UBERON:0003059!3.28e-07!11;UBERON:0007282!3.28e-07!11;UBERON:0009618!3.28e-07!11;UBERON:0007285!3.28e-07!11;UBERON:0000065!6.75e-07!41;UBERON:0002048!9.76e-07!14;UBERON:0000117!9.76e-07!14;UBERON:0000171!9.76e-07!14;UBERON:0000170!9.76e-07!14;UBERON:0005597!9.76e-07!14;UBERON:0000118!9.76e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,8.74e-08,17;UBERON:0005181,8.74e-08,17;UBERON:0002224,8.74e-08,17;UBERON:0000915,8.74e-08,17;UBERON:0008947,8.74e-08,17;UBERON:0003258,8.74e-08,17;UBERON:0007524,3.28e-07,11;UBERON:0003077,3.28e-07,11;UBERON:0007285,3.28e-07,11;UBERON:0000065,6.73e-07,41;UBERON:0002048,9.76e-07,14;UBERON:0000117,9.76e-07,14;UBERON:0000171,9.76e-07,14;UBERON:0000170,9.76e-07,14;UBERON:0005597,9.76e-07,14;UBERON:0000118,9.76e-07,14|phase1_expression=24.8230713012431,8.02643437570531,6.82498859084304,9.67885476181856,2.00358291978539,11.5836697619204,8.1764424208434,20.5306084272106,4.78681655315667,3.5109678948299,11.8140398075598,10.8490136233658,23.4545000005752,20.7186353733024,9.99329285446988,10.7311891716608,7.69518065940961,15.2999150198745,18.2362196695633,13.580468857537,8.75945888556019,23.7305373370116,23.7691808116431,8.63959083084396,11.4704640533585,2.29692785646008,8.61523992318149,9.9116767035509,12.7315691035771,14.1136872665561,8.64748991555688,6.35030673459631,9.22597181376855,15.8481681015439,16.1756907060714,16.4572298904907,13.0668388007916,29.7157457823205,18.7520482685712,28.7938059185589,24.7057224973026,23.9065919735456,20.8769451803396,22.9132208715551,23.6208249741469,25.1459050461504,10.9534788208725,2.8343270329458,3.73466510648602,6.41618666945135,4.61955191363696,5.75010257459886,11.4092172119261,15.2326049822382,16.8046899571232,25.7259436035947,22.9226751951005,23.2052441524849,7.48570905180512,5.81890077199236,8.87363964908651,9.4876468979357,6.22506357277798,6.74924787961049,5.93319817540185,3.5524005747305,4.19440154725767,2.68952813725088,11.3021677416241,6.48028503992115,8.83364837675805,7.9982275633065,9.49734726091938,11.6366259254206,10.2554653989513,10.1114066527102,13.2139057199266,15.0671058940522,15.3606533256243,8.04506355154182,9.42322729104819,12.5019208933622,10.3297709630511,19.1339287410771,19.4053774676549,12.0797720044204,15.5185132071022,10.6247684120421,20.7489769732924,23.956184553851,16.5222758559956,5.16254326188832,0.679971333707751,4.31762553310254,9.09686984426737,4.92829575807069,9.12888730856387,15.6795896771813,18.1850203222008,14.8402621294343,19.858922188512,15.3991772897181,17.8363667794652,0,19.9171757730317,25.3359865475099,18.704404465547,8.22123933977232,19.1614033898907,20.1881309128162,19.9508125781056,17.0500667854799,19.3717017695089,16.5794904607885,16.6975964132701,19.6039882474294,15.5732829672656,11.7125479105128,12.3845477272982,17.6325866442676,11.4837589599405,16.9706338597328,13.0474232852686,10.2473278954042,11.9384622883669,8.9409969323007,16.1750418082992,8.99854096490112,13.5965142968179,13.1815762676244,9.60751265919116,17.3403005915753,14.7750672163435,12.5300574091862,10.8049783170971,12.1680947300818,19.1458004038595,15.7996852674818,22.7450482590307,10.5220927943237,20.1686686592191,19.3117767724117,16.2055916824814,16.4268251440929,14.0835553243249,15.6298738747517,13.118241438362,12.1590584247337,18.7544153851573,22.3145174598027,21.9938905204936,21.0427903130472,22.2437799380478,12.1888258282758,16.8741351854514,20.5005294823048,9.83098462238529,7.20574139921202,12.7873574728017,18.4341937556597,19.7001890384121,19.9868888221726,16.5721314909647,17.5120166255189,19.9004575624718,20.6955210827863,19.3156849007726,20.3171695718875,18.2661433403963,21.5059377943615,15.8084178614419,16.9591985413385,14.4903076092093,18.3862793701709,13.6688466566683,9.8788427884113,13.5471701023357,10.5780226665418,19.8358072997768,15.0953836709285,17.6548422011268,16.7397325437374,12.2307924114679,13.3157938278791,14.7104009078799,15.646400698781,16.0854533632172,16.1154742353332,17.7417319278399,15.2799299471218,14.2651112917298,14.9355954940775,14.7940962743404,20.5647322697512,11.270773567308,16.2921062276251,22.304536024277,19.0769430101666,19.413616897147,14.1705742060418,18.2118524295995,19.3733547357227,5.63259991465583,12.5133829287071,15.3316016188298,13.0420025183215,12.7801876474757,9.88826354984909,16.0414286622294,11.5078454980324,11.8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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:52206
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:D6RDT6,uniprot:Q3TM92,uniprot:Q91W96
|association_with_transcript=0bp_to_ENSMUST00000144574,NM_024213,uc008xkw.1,uc008xkx.1_5end
|cluster_id=chr5:53225353..53225406,+
|description=CAGE_peak_1_at_Anapc4_5end
|id=chr5:53225353..53225406,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!3.38e-08!193;UBERON:0004120!3.38e-08!193;UBERON:0006603!3.38e-08!193;UBERON:0005178!8.74e-08!17;UBERON:0005181!8.74e-08!17;UBERON:0002224!8.74e-08!17;UBERON:0000915!8.74e-08!17;UBERON:0008947!8.74e-08!17;UBERON:0003258!8.74e-08!17;UBERON:0002329!3.28e-07!11;UBERON:0003077!3.28e-07!11;UBERON:0003059!3.28e-07!11;UBERON:0007282!3.28e-07!11;UBERON:0009618!3.28e-07!11;UBERON:0007285!3.28e-07!11;UBERON:0000065!6.75e-07!41;UBERON:0002048!9.76e-07!14;UBERON:0000117!9.76e-07!14;UBERON:0000171!9.76e-07!14;UBERON:0000170!9.76e-07!14;UBERON:0005597!9.76e-07!14;UBERON:0000118!9.76e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005178,8.74e-08,17;UBERON:0005181,8.74e-08,17;UBERON:0002224,8.74e-08,17;UBERON:0000915,8.74e-08,17;UBERON:0008947,8.74e-08,17;UBERON:0003258,8.74e-08,17;UBERON:0007524,3.28e-07,11;UBERON:0003077,3.28e-07,11;UBERON:0007285,3.28e-07,11;UBERON:0000065,6.73e-07,41;UBERON:0002048,9.76e-07,14;UBERON:0000117,9.76e-07,14;UBERON:0000171,9.76e-07,14;UBERON:0000170,9.76e-07,14;UBERON:0005597,9.76e-07,14;UBERON:0000118,9.76e-07,14
|phase1_expression=24.8230713012431,8.02643437570531,6.82498859084304,9.67885476181856,2.00358291978539,11.5836697619204,8.1764424208434,20.5306084272106,4.78681655315667,3.5109678948299,11.8140398075598,10.8490136233658,23.4545000005752,20.7186353733024,9.99329285446988,10.7311891716608,7.69518065940961,15.2999150198745,18.2362196695633,13.580468857537,8.75945888556019,23.7305373370116,23.7691808116431,8.63959083084396,11.4704640533585,2.29692785646008,8.61523992318149,9.9116767035509,12.7315691035771,14.1136872665561,8.64748991555688,6.35030673459631,9.22597181376855,15.8481681015439,16.1756907060714,16.4572298904907,13.0668388007916,29.7157457823205,18.7520482685712,28.7938059185589,24.7057224973026,23.9065919735456,20.8769451803396,22.9132208715551,23.6208249741469,25.1459050461504,10.9534788208725,2.8343270329458,3.73466510648602,6.41618666945135,4.61955191363696,5.75010257459886,11.4092172119261,15.2326049822382,16.8046899571232,25.7259436035947,22.9226751951005,23.2052441524849,7.48570905180512,5.81890077199236,8.87363964908651,9.4876468979357,6.22506357277798,6.74924787961049,5.93319817540185,3.5524005747305,4.19440154725767,2.68952813725088,11.3021677416241,6.48028503992115,8.83364837675805,7.9982275633065,9.49734726091938,11.6366259254206,10.2554653989513,10.1114066527102,13.2139057199266,15.0671058940522,15.3606533256243,8.04506355154182,9.42322729104819,12.5019208933622,10.3297709630511,19.1339287410771,19.4053774676549,12.0797720044204,15.5185132071022,10.6247684120421,20.7489769732924,23.956184553851,16.5222758559956,5.16254326188832,0.679971333707751,4.31762553310254,9.09686984426737,4.92829575807069,9.12888730856387,15.6795896771813,18.1850203222008,14.8402621294343,19.858922188512,15.3991772897181,17.8363667794652,0,19.9171757730317,25.3359865475099,18.704404465547,8.22123933977232,19.1614033898907,20.1881309128162,19.9508125781056,17.0500667854799,19.3717017695089,16.5794904607885,16.6975964132701,19.6039882474294,15.5732829672656,11.7125479105128,12.3845477272982,17.6325866442676,11.4837589599405,16.9706338597328,13.0474232852686,10.2473278954042,11.9384622883669,8.9409969323007,16.1750418082992,8.99854096490112,13.5965142968179,13.1815762676244,9.60751265919116,17.3403005915753,14.7750672163435,12.5300574091862,10.8049783170971,12.1680947300818,19.1458004038595,15.7996852674818,22.7450482590307,10.5220927943237,20.1686686592191,19.3117767724117,16.2055916824814,16.4268251440929,14.0835553243249,15.6298738747517,13.118241438362,12.1590584247337,18.7544153851573,22.3145174598027,21.9938905204936,21.0427903130472,22.2437799380478,12.1888258282758,16.8741351854514,20.5005294823048,9.83098462238529,7.20574139921202,12.7873574728017,18.4341937556597,19.7001890384121,19.9868888221726,16.5721314909647,17.5120166255189,19.9004575624718,20.6955210827863,19.3156849007726,20.3171695718875,18.2661433403963,21.5059377943615,15.8084178614419,16.9591985413385,14.4903076092093,18.3862793701709,13.6688466566683,9.8788427884113,13.5471701023357,10.5780226665418,19.8358072997768,15.0953836709285,17.6548422011268,16.7397325437374,12.2307924114679,13.3157938278791,14.7104009078799,15.646400698781,16.0854533632172,16.1154742353332,17.7417319278399,15.2799299471218,14.2651112917298,14.9355954940775,14.7940962743404,20.5647322697512,11.270773567308,16.2921062276251,22.304536024277,19.0769430101666,19.413616897147,14.1705742060418,18.2118524295995,19.3733547357227,5.63259991465583,12.5133829287071,15.3316016188298,13.0420025183215,12.7801876474757,9.88826354984909,16.0414286622294,11.5078454980324,11.8358715545776,16.748246204473,18.6898668485561,16.3742016974142,10.9213185590096,8.5876818502018,11.3020370518805,12.0610880340842,20.8771104888263,22.7389694124582,18.2520773615069,22.7458414938752,20.8874320976767,20.1007508930179,19.5195785526531,26.5381761086606,19.7043930132739,25.0255099303116,19.7723913135284,19.6635977658886,24.6939524068231,19.9615700842486,21.1107797514981,16.86107619838,8.35999264132362,15.1765210467603,11.7201930691088,13.5965556446956,23.6066321342413,13.1284882146274,21.4545589203055,17.1793047490521,16.8030250231583,16.7278158566786,16.2643032080148,14.4369030702305,13.3587531552715,19.2888866221466,13.8350722281283,8.35435422696698,14.0520684356186,14.4233138970477,16.9402437727719,13.857490329693,7.96470830039777,20.1507928008635,19.3487076457441,19.2377181351016,10.6308681437078,17.2163682848599,20.1574068671212,28.7191646287229,23.1723295950069,14.5376908650475,11.5960469432499,13.4076206222643,24.5116516142727,24.8484309763208,13.8413791647547,22.076714608254,20.748807336146,17.1234064897988,23.2014119048991,13.700922710157,23.7018425144347,22.4541995115649,13.4522322813527,7.74965388824956,16.1464426695906,17.6113740790215,14.8021706563889,12.3105674808796,13.699599321603,10.9400928186201,9.56876932467975,17.5428837768739,13.519200497989,12.9974235333237,12.7125631780553,12.3540213531522,14.2781881194838,15.3946597556024,13.2671974852247,6.68269432610579,25.9395514736531,15.2489600345137,17.4968652131318,16.517975385143,14.1935666435015,17.5323650300267,15.2082358534618,10.2084817373772,13.6095721956383,14.2908042009993,6.20062232552609,21.380866084289,18.5313509311949,18.6673140810286,14.5950600529836,14.3612706667161,16.195298933114,21.8743366537836,23.6982118402107,17.8772249411244,12.6733202753461,18.3286449964343,17.8398189455344,13.7632682600869,18.5786776858247,16.2914293057408,20.0668168329078,19.471662822235,19.4950175870442,19.8903906397851,19.8137697303,20.4677155827786,23.5848071390201,22.1287235772758,23.6091342406769,8.16229381014761,20.422707710414,20.0061900239131,24.8469232218836,15.0687883345109,13.8885031833875,13.5532201957776,14.7914181564555,14.5455910170255,7.90652579663893,11.5081309126794,9.73922372846974,15.2949332285882,11.6464028361009,9.06472676867641,10.8003600037089,9.45674526770863,12.6879874515577,10.8729665467882,20.7574695168353,17.9561193030464,19.6343646617254,15.0726164582342,17.3978924981225,15.2590112013512,12.8903102124937,11.9500333198559,13.4786068028562,14.1510438587727,13.4344028941827,12.8265912142532,14.7953581802414,16.1343384060271,17.1157697487728,18.5754539600399,15.9920369803901,14.2752823143142,19.3680373377554,14.1310963329021,12.6861623382604,18.6349596467304,15.0214799666812,15.1160273297622,18.3513291809895,16.9229215783353,14.8171658026946,12.8904158604543,15.3458648645824,9.53941861818155,15.8970924286393,15.9577261448413,17.187703813127,16.1134314833405,18.3261280432084,12.2407183189594,13.5680332898337,13.3220053509945,11.6685882561994,12.1325280515734,15.5351449865682
|short_description=p1@Anapc4
}}

Revision as of 11:12, 4 August 2015

Short description:p1@Anapc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Anapc4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000144574, NM_024213, uc008xkw.1, uc008xkx.1_5end
EntrezGene:52206
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Anapc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.73
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I18.62
GP2+ M cell, pool3.CNhs13240.11847-124I29.91
Ileum epithelium, pool1.CNhs13199.10252-104B912.73
Ileum epithelium, pool2.CNhs13232.10253-104C114.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H223.91
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.15
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.23
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A116.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.30
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.48
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.62
Mouse Schwann, donor1.CNhs12507.11728-123D920.75
Mouse Schwann, donor2.CNhs12573.11746-123F923.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.13
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I814.84
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G119.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.34
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H919.16
adrenal gland, adult.CNhs10508.49-24D720.19
adrenal gland, embryo E14.CNhs11038.406-44C519.95
adrenal gland, embryo E16.CNhs11004.1254-43D617.05
adrenal gland, embryo E17.CNhs11043.1263-45I119.37
adrenal gland, embryo E18.CNhs11026.1262-18F516.58
adrenal gland, neonate N00.CNhs11191.1311-23C116.70
adrenal gland, neonate N25.CNhs11223.1377-27I319.60
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H111.71
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F517.63
bone (os femoris), neonate N16.CNhs11225.1525-43A611.48
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H78.94
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.18
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A413.18
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F117.34
cortex, adult.CNhs10473.12-14D514.78
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F210.80
diencephalon, neonate N30.CNhs11201.1388-42B212.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.80
epididymis, adult.CNhs10490.58-23B222.75
eyeball, adult.CNhs10484.31-12G410.52
eyeball, embryo E12.CNhs11016.345-16C620.17
eyeball, embryo E14.CNhs10521.399-16E219.31
eyeball, embryo E15.CNhs10593.426-16C916.21
eyeball, embryo E17.CNhs11023.1261-18D416.43
eyeball, neonate N00.CNhs11207.633-15C614.08
eyeball, neonate N01.CNhs11140.1532-43E715.63
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E218.75
forelimb, embryo E12.CNhs10600.359-14H222.31
forelimb, embryo E13.CNhs10589.384-1E221.99
forelimb, embryo E14.CNhs10577.413-26A821.04
forelimb, embryo E15.CNhs11007.437-20E722.24
forelimb, embryo E17.CNhs10598.1517-43C412.19
forelimb, embryo E18.CNhs11008.1520-43B516.87
gonad, embryo E13.CNhs11044.1564-45I620.50
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.79
heart, embryo E11.CNhs10586.331-24E918.43
heart, embryo E12.CNhs11015.353-12F519.70
heart, embryo E13.CNhs11013.376-3I919.99
heart, embryo E14.CNhs10597.403-26D416.57
heart, embryo E15.CNhs11017.431-16C817.51
heart, embryo E16.CNhs11021.457-17C619.90
heart, embryo E17.CNhs11025.479-18E520.70
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E320.32
heart, neonate N03.CNhs11221.1349-25I218.27
heart, neonate N10.CNhs11118.749-24G121.51
heart, neonate N16.CNhs11209.782-15G115.81
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D314.49
heart, neonate N30.CNhs11202.1390-42D218.39
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G19.88
intestinal mucosa, adult.CNhs10506.860-29I313.55
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I519.84
intestine, embryo E13.CNhs11010.381-16D515.10
intestine, embryo E15.CNhs10602.976-16D817.65
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F713.32
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E915.65
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F216.12
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E314.27
intestine, neonate N30.CNhs11131.1384-42G114.94
kidney, embryo E14.CNhs10606.411-4I914.79
kidney, embryo E15.CNhs10997.434-16F820.56
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C722.30
kidney, neonate N00.CNhs11214.646-21G719.08
kidney, neonate N10.CNhs11206.758-6D519.41
kidney, neonate N20.CNhs11113.832-19I114.17
kidney, neonate N25.CNhs11122.1353-25F318.21
kidney, neonate N30.CNhs11203.1385-42H119.37
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F812.51
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D712.78
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A316.04
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G216.75
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H111.30
liver, neonate N30.CNhs11106.1382-42D112.06
lung, adult.CNhs10474.28-22B120.88
lung, embryo E12.CNhs10522.354-16G222.74
lung, embryo E14.CNhs10604.404-26F818.25
lung, embryo E15.CNhs11020.432-17C522.75
lung, embryo E16.CNhs10998.458-17B620.89
lung, embryo E17.CNhs10605.480-44A620.10
lung, embryo E18.CNhs10583.1287-20I619.52
lung, neonate N00.CNhs11224.640-42C626.54
lung, neonate N06.CNhs11212.683-20E519.70
lung, neonate N07.CNhs11111.715-19A325.03
lung, neonate N10.CNhs11219.750-23E619.77
lung, neonate N20.CNhs11109.822-18A419.66
lung, neonate N25.CNhs11119.1359-25C724.69
lung, neonate N30.CNhs11133.1394-42H219.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.86
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H215.18
medulla oblongata, adult.CNhs10477.17-12C211.72
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E121.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.18
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.73
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.44
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H714.42
ovary, neonate N00.CNhs11217.1299-22I416.94
oviduct, adult pregnant day01.CNhs10500.988-6G613.86
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F420.15
pancreas, embryo E15.CNhs11042.1556-45F219.35
pancreas, embryo E16.CNhs11003.460-26E519.24
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G920.16
pancreas, neonate N01.CNhs11138.1531-43D728.72
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B614.54
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G824.51
pituitary gland, embryo E12.CNhs11018.346-16E624.85
pituitary gland, embryo E13.CNhs11009.370-44C713.84
pituitary gland, embryo E14.CNhs11037.398-44A522.08
pituitary gland, embryo E15.CNhs10592.427-16B920.75
pituitary gland, embryo E16.CNhs11036.449-43F617.12
pituitary gland, embryo E17.CNhs11039.1265-44F523.20
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I723.70
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C37.75
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H317.61
skin, neonate N06.CNhs11097.693-20I514.80
skin, neonate N10.CNhs11108.762-6C412.31
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C910.94
spleen, adult.CNhs10465.25-2G29.57
spleen, embryo E16.CNhs11035.461-43C117.54
spleen, embryo E18.CNhs11011.1271-21F213.52
spleen, neonate N10.CNhs11116.752-24D113.00
spleen, neonate N20.CNhs11112.824-19H112.71
spleen, neonate N25.CNhs11099.1354-25G312.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C915.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D313.27
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E325.94
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D417.50
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C614.19
stomach, neonate N03.CNhs11193.1340-24B817.53
stomach, neonate N07.CNhs11210.718-18A915.21
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F521.38
testis, embryo E15.CNhs11034.443-27C518.53
testis, embryo E16.CNhs11033.470-26G518.67
testis, embryo E17.CNhs11029.486-18I514.60
testis, embryo E18.CNhs11027.503-18G514.36
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I421.87
testis, neonate N10.CNhs11204.763-44D923.70
testis, neonate N20.CNhs11110.839-18H317.88
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I417.84
thymus, embryo E15.CNhs11005.430-45I213.76
thymus, embryo E16.CNhs11002.456-26C518.58
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G420.07
thymus, neonate N02.CNhs11181.1541-43F819.47
thymus, neonate N03.CNhs11137.2104-43C719.50
thymus, neonate N06.CNhs11197.681-26C419.89
thymus, neonate N07.CNhs11211.713-19D319.81
thymus, neonate N10.CNhs11194.748-24E420.47
thymus, neonate N20.CNhs11186.820-7A223.58
thymus, neonate N25.CNhs11125.1362-25G722.13
thymus, neonate N30.CNhs11132.1393-42G223.61
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.85
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E513.55
vagina, adult.CNhs10502.89-27D514.79
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.51
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.29
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I820.76
whole body, embryo E12.CNhs10587.857-27C917.96
whole body, embryo E13.CNhs10512.372-23H219.63
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B117.40
whole body, embryo E16.CNhs10514.453-14F215.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.48
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.43
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.12
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.82
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.19
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.11
whole body, embryo E17.5.CNhs10513.490-9F918.33
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C213.32
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D112.13
whole body, neonate N10.CNhs10518.761-6B415.54





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element8.74e-0817
thoracic segment organ8.74e-0817
thoracic cavity8.74e-0817
thoracic segment of trunk8.74e-0817
respiratory primordium8.74e-0817
endoderm of foregut8.74e-0817
dense mesenchyme tissue3.28e-0711
paraxial mesoderm3.28e-0711
presumptive paraxial mesoderm3.28e-0711
respiratory tract6.73e-0741
lung9.76e-0714
respiratory tube9.76e-0714
respiration organ9.76e-0714
pair of lungs9.76e-0714
lung primordium9.76e-0714
lung bud9.76e-0714
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