FFCP PHASE1:Mm9::chr7:20282814..20282847,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:20282814..20282847,+ | |||
|description=CAGE_peak_at_chr7:20282814..20282847,+ | |description=CAGE_peak_at_chr7:20282814..20282847,+ | ||
|id=chr7:20282814..20282847,+ | |id=chr7:20282814..20282847,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.31e-10,8;CL:0002194,4.50e-08,4;CL:0000766,4.50e-08,4;CL:0000234,4.50e-08,4;CL:0000576,4.50e-08,4;CL:0000235,4.50e-08,4;CL:0000864,4.50e-08,4;CL:0002009,4.50e-08,4;CL:0000040,4.50e-08,4;CL:0000559,4.50e-08,4;CL:0000333,4.57e-08,10;CL:0000095,4.57e-08,10;CL:0000243,4.57e-08,10;CL:0000123,4.57e-08,10;CL:0000125,4.57e-08,10;CL:0000030,4.57e-08,10;CL:0000339,4.57e-08,10;CL:0002319,4.77e-08,43;CL:0000221,8.90e-08,44;CL:0000133,8.90e-08,44;CL:0002321,1.54e-07,70;CL:0002092,1.85e-07,3;CL:0002540,1.85e-07,3;CL:0000182,1.92e-07,5;CL:0000128,6.23e-07,6;CL:0000126,6.23e-07,6;CL:0000127,6.23e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.58e-13!22;UBERON:0007499!2.58e-13!22;UBERON:0006925!2.58e-13!22;UBERON:0009497!2.58e-13!22;UBERON:0000015!2.58e-13!22;UBERON:0002423!2.58e-13!22;UBERON:0006235!2.58e-13!22;UBERON:0008835!2.58e-13!22;UBERON:0003894!2.58e-13!22;UBERON:0004161!2.58e-13!22;UBERON:0008836!2.58e-13!22;UBERON:0002365!1.08e-12!25;UBERON:0002330!1.08e-12!25;UBERON:0009854!3.02e-12!23;UBERON:0009856!3.02e-12!23;UBERON:0005172!3.98e-09!49;UBERON:0005173!3.98e-09!49;UBERON:0002417!3.98e-09!49;UBERON:0000916!3.98e-09!49;UBERON:0000025!1.51e-08!114;UBERON:0004111!1.01e-07!122;UBERON:0001017!3.33e-07!73;UBERON:0005743!3.33e-07!73;UBERON:0000073!7.34e-07!75;UBERON:0001016!7.34e-07!75 | |ontology_enrichment_uberon=UBERON:0002107!2.58e-13!22;UBERON:0007499!2.58e-13!22;UBERON:0006925!2.58e-13!22;UBERON:0009497!2.58e-13!22;UBERON:0000015!2.58e-13!22;UBERON:0002423!2.58e-13!22;UBERON:0006235!2.58e-13!22;UBERON:0008835!2.58e-13!22;UBERON:0003894!2.58e-13!22;UBERON:0004161!2.58e-13!22;UBERON:0008836!2.58e-13!22;UBERON:0002365!1.08e-12!25;UBERON:0002330!1.08e-12!25;UBERON:0009854!3.02e-12!23;UBERON:0009856!3.02e-12!23;UBERON:0005172!3.98e-09!49;UBERON:0005173!3.98e-09!49;UBERON:0002417!3.98e-09!49;UBERON:0000916!3.98e-09!49;UBERON:0000025!1.51e-08!114;UBERON:0004111!1.01e-07!122;UBERON:0001017!3.33e-07!73;UBERON:0005743!3.33e-07!73;UBERON:0000073!7.34e-07!75;UBERON:0001016!7.34e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.43e-23,22;UBERON:0007499,4.43e-23,22;UBERON:0006925,4.43e-23,22;UBERON:0009497,4.43e-23,22;UBERON:0000015,4.43e-23,22;UBERON:0002423,4.43e-23,22;UBERON:0006235,4.43e-23,22;UBERON:0008835,4.43e-23,22;UBERON:0003894,4.43e-23,22;UBERON:0004161,4.43e-23,22;UBERON:0008836,4.43e-23,22;UBERON:0009854,7.20e-22,23;UBERON:0009856,7.20e-22,23;UBERON:0002365,9.69e-20,25;UBERON:0002330,9.69e-20,25;UBERON:0005256,2.15e-11,45;UBERON:0000025,4.10e-11,114;UBERON:0005172,6.20e-10,49;UBERON:0005173,6.20e-10,49;UBERON:0002417,6.20e-10,49;UBERON:0000916,6.20e-10,49;UBERON:0004111,7.74e-10,122;UBERON:0003914,1.54e-09,47;UBERON:0003076,4.67e-08,12;UBERON:0003057,4.67e-08,12;UBERON:0003104,3.78e-07,61;UBERON:0009142,3.78e-07,61 | |||
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| ||
|short_description=p@chr7:20282814..20282847,+ | |short_description=p@chr7:20282814..20282847,+ | ||
}} | }} |
Latest revision as of 18:27, 4 August 2015
Short description: | p@chr7:20282814..20282847, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282814..20282847, + |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.31e-10 | 8 |
monopoietic cell | 4.50e-08 | 4 |
myeloid leukocyte | 4.50e-08 | 4 |
phagocyte | 4.50e-08 | 4 |
monocyte | 4.50e-08 | 4 |
macrophage | 4.50e-08 | 4 |
tissue-resident macrophage | 4.50e-08 | 4 |
macrophage dendritic cell progenitor | 4.50e-08 | 4 |
monoblast | 4.50e-08 | 4 |
promonocyte | 4.50e-08 | 4 |
migratory neural crest cell | 4.57e-08 | 10 |
neuron associated cell | 4.57e-08 | 10 |
glial cell (sensu Vertebrata) | 4.57e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.57e-08 | 10 |
glial cell | 4.57e-08 | 10 |
glioblast | 4.57e-08 | 10 |
glioblast (sensu Vertebrata) | 4.57e-08 | 10 |
neural cell | 4.77e-08 | 43 |
ectodermal cell | 8.90e-08 | 44 |
neurectodermal cell | 8.90e-08 | 44 |
embryonic cell | 1.54e-07 | 70 |
bone marrow cell | 1.85e-07 | 3 |
mesenchymal stem cell of the bone marrow | 1.85e-07 | 3 |
hepatocyte | 1.92e-07 | 5 |
oligodendrocyte | 6.23e-07 | 6 |
macroglial cell | 6.23e-07 | 6 |
astrocyte | 6.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 4.43e-23 | 22 |
epithelial sac | 4.43e-23 | 22 |
digestive gland | 4.43e-23 | 22 |
epithelium of foregut-midgut junction | 4.43e-23 | 22 |
anatomical boundary | 4.43e-23 | 22 |
hepatobiliary system | 4.43e-23 | 22 |
foregut-midgut junction | 4.43e-23 | 22 |
hepatic diverticulum | 4.43e-23 | 22 |
liver primordium | 4.43e-23 | 22 |
septum transversum | 4.43e-23 | 22 |
liver bud | 4.43e-23 | 22 |
digestive tract diverticulum | 7.20e-22 | 23 |
sac | 7.20e-22 | 23 |
exocrine gland | 9.69e-20 | 25 |
exocrine system | 9.69e-20 | 25 |
trunk mesenchyme | 2.15e-11 | 45 |
tube | 4.10e-11 | 114 |
abdomen element | 6.20e-10 | 49 |
abdominal segment element | 6.20e-10 | 49 |
abdominal segment of trunk | 6.20e-10 | 49 |
abdomen | 6.20e-10 | 49 |
anatomical conduit | 7.74e-10 | 122 |
epithelial tube | 1.54e-09 | 47 |
posterior neural tube | 4.67e-08 | 12 |
chordal neural plate | 4.67e-08 | 12 |
mesenchyme | 3.78e-07 | 61 |
entire embryonic mesenchyme | 3.78e-07 | 61 |