FFCP PHASE1:Mm9::chr7:25162358..25162371,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=644 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:25162358..25162371,+ | |||
|description=CAGE_peak_at_chr7:25162358..25162371,+ | |description=CAGE_peak_at_chr7:25162358..25162371,+ | ||
|id=chr7:25162358..25162371,+ | |id=chr7:25162358..25162371,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,7.72e-18,9;CL:0002027,1.60e-14,3;CL:0002006,1.60e-14,3;CL:0002024,1.60e-14,3;CL:0000764,4.47e-14,3;CL:0000765,4.47e-14,3;CL:0000038,4.47e-14,3;CL:0000547,4.47e-14,3;CL:0000839,3.26e-12,13;CL:0000763,7.84e-10,16;CL:0000049,3.36e-08,19;CL:0000553,1.69e-07,6;CL:0000556,1.69e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.47e-14,3;DOID:0060083,4.47e-14,3;DOID:1240,4.47e-14,3;DOID:0050686,2.78e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.03e-07!6;UBERON:0004457!2.03e-07!6;UBERON:0000042!2.03e-07!6;UBERON:0004854!2.03e-07!6;UBERON:0009034!2.03e-07!6;UBERON:0002095!2.03e-07!6;UBERON:0004782!2.03e-07!6;UBERON:0003281!2.03e-07!6;UBERON:0009664!2.03e-07!6;UBERON:0002296!2.03e-07!6;UBERON:0005602!2.03e-07!6;UBERON:0001179!2.03e-07!6;UBERON:0006293!2.03e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.87e-12,6;UBERON:0004457,1.87e-12,6;UBERON:0000042,1.87e-12,6;UBERON:0004854,1.87e-12,6;UBERON:0009034,1.87e-12,6;UBERON:0002095,1.87e-12,6;UBERON:0004782,1.87e-12,6;UBERON:0003281,1.87e-12,6;UBERON:0009664,1.87e-12,6;UBERON:0002296,1.87e-12,6;UBERON:0005602,1.87e-12,6;UBERON:0001179,1.87e-12,6;UBERON:0006293,1.87e-12,6;UBERON:0005172,1.81e-09,49;UBERON:0005173,1.81e-09,49;UBERON:0002417,1.81e-09,49;UBERON:0000916,1.81e-09,49;UBERON:0002107,2.64e-09,22;UBERON:0007499,2.64e-09,22;UBERON:0006925,2.64e-09,22;UBERON:0009497,2.64e-09,22;UBERON:0000015,2.64e-09,22;UBERON:0002423,2.64e-09,22;UBERON:0006235,2.64e-09,22;UBERON:0008835,2.64e-09,22;UBERON:0003894,2.64e-09,22;UBERON:0004161,2.64e-09,22;UBERON:0008836,2.64e-09,22;UBERON:0009854,7.23e-09,23;UBERON:0009856,7.23e-09,23;UBERON:0002365,4.27e-08,25;UBERON:0002330,4.27e-08,25;UBERON:0003887,1.60e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0,1.99865857089398,2.63217847606774,6.99561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0.884610551949874,0.485300549842228,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,1.33476084572875,0.786235980452812,1.79889689907883,2.02860121388503,3.13530307678142,8.14802725700543,2.30156909960649,1.62135226775035,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,1.53783792718067,0.412773735926445,0.555583582109135,3.57900068308913,2.1871076435364,3.43167259809784,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.34461281373368,0,0.347652977834566,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,0,0.407412341537585,0,0.237270036248348,0.29551344712669,1.22769312950907,0.464810523557898,0,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0.0797721589953364,0.171200729931206,0,1.99865857089398,2.63217847606774,6.99561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0.884610551949874,0.485300549842228,1.10420759230197,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0.497627882440372,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,1.33476084572875,0.786235980452812,1.79889689907883,2.02860121388503,3.13530307678142,8.14802725700543,2.30156909960649,1.62135226775035,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,1.53783792718067,0.412773735926445,0.555583582109135,3.57900068308913,2.1871076435364,3.43167259809784,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.666740183404846,0.412070114477788,0,0.758091635291392,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.34461281373368,0,0.347652977834566,0.578727661391115,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.592302255241736,0.365855945745545,0,0.407412341537585,0,0.237270036248348,0.29551344712669,1.22769312950907,0.464810523557898,0,0,0.233931608445408,0.644613162144895,0,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr7:25162358..25162371,+ | |short_description=p@chr7:25162358..25162371,+ | ||
}} | }} |
Latest revision as of 18:59, 4 August 2015
Short description: | p@chr7:25162358..25162371, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:25162358..25162371, + |
Coexpression cluster: | MCL_coexpression_mm9:644 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 7.72e-18 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.60e-14 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.60e-14 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.60e-14 | 3 |
erythroid lineage cell | 4.47e-14 | 3 |
erythroblast | 4.47e-14 | 3 |
erythroid progenitor cell | 4.47e-14 | 3 |
proerythroblast | 4.47e-14 | 3 |
myeloid lineage restricted progenitor cell | 3.26e-12 | 13 |
myeloid cell | 7.84e-10 | 16 |
common myeloid progenitor | 3.36e-08 | 19 |
megakaryocyte progenitor cell | 1.69e-07 | 6 |
megakaryocyte | 1.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.87e-12 | 6 |
cavity lining | 1.87e-12 | 6 |
serous membrane | 1.87e-12 | 6 |
gastrointestinal system mesentery | 1.87e-12 | 6 |
stomach region | 1.87e-12 | 6 |
mesentery | 1.87e-12 | 6 |
gastrointestinal system serosa | 1.87e-12 | 6 |
mesentery of stomach | 1.87e-12 | 6 |
gut mesentery | 1.87e-12 | 6 |
dorsal mesentery | 1.87e-12 | 6 |
dorsal mesogastrium | 1.87e-12 | 6 |
peritoneal cavity | 1.87e-12 | 6 |
spleen primordium | 1.87e-12 | 6 |
abdomen element | 1.81e-09 | 49 |
abdominal segment element | 1.81e-09 | 49 |
abdominal segment of trunk | 1.81e-09 | 49 |
abdomen | 1.81e-09 | 49 |
liver | 2.64e-09 | 22 |
epithelial sac | 2.64e-09 | 22 |
digestive gland | 2.64e-09 | 22 |
epithelium of foregut-midgut junction | 2.64e-09 | 22 |
anatomical boundary | 2.64e-09 | 22 |
hepatobiliary system | 2.64e-09 | 22 |
foregut-midgut junction | 2.64e-09 | 22 |
hepatic diverticulum | 2.64e-09 | 22 |
liver primordium | 2.64e-09 | 22 |
septum transversum | 2.64e-09 | 22 |
liver bud | 2.64e-09 | 22 |
digestive tract diverticulum | 7.23e-09 | 23 |
sac | 7.23e-09 | 23 |
exocrine gland | 4.27e-08 | 25 |
exocrine system | 4.27e-08 | 25 |
intraembryonic coelom | 1.60e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.47e-14 | 3 |
immune system cancer | 4.47e-14 | 3 |
leukemia | 4.47e-14 | 3 |
organ system cancer | 2.78e-07 | 6 |