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FFCP PHASE1:Mm9::chr7:25689375..25689396,+: Difference between revisions

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{{FFCP|EntrezGene=16801|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000145783_5end|description=CAGE_peak_4_at_Arhgef1_5end|id=chr7:25689375..25689396,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.21e-08!29;UBERON:0003929!7.99e-08!55;UBERON:0003408!1.05e-07!24;UBERON:0006562!1.63e-07!24;UBERON:0001557!1.63e-07!24;UBERON:0001042!1.63e-07!24;UBERON:0008814!1.63e-07!24;UBERON:0009145!1.63e-07!24;UBERON:0005911!2.31e-07!69;UBERON:0002370!3.70e-07!23;UBERON:0000974!3.70e-07!23;UBERON:0004807!3.70e-07!23;UBERON:0005058!3.70e-07!23;UBERON:0003351!3.70e-07!23;UBERON:0009113!3.70e-07!23;UBERON:0003295!3.70e-07!23;UBERON:0009722!3.70e-07!23;UBERON:0005562!3.70e-07!23;UBERON:0007690!3.70e-07!23;UBERON:0004119!5.04e-07!130;UBERON:0000925!5.04e-07!130;UBERON:0006595!5.04e-07!130;UBERON:0004921!6.50e-07!126;UBERON:0004185!6.50e-07!126;UBERON:0005057!7.19e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000077,6.32e-09,35;UBERON:0004177,1.51e-08,29;UBERON:0005057,1.51e-08,29;UBERON:0003929,7.36e-08,55;UBERON:0003408,1.32e-07,24;UBERON:0006562,2.05e-07,24;UBERON:0001557,2.05e-07,24;UBERON:0001042,2.05e-07,24;UBERON:0008814,2.05e-07,24;UBERON:0009145,2.05e-07,24;UBERON:0005911,2.15e-07,69;UBERON:0004119,2.42e-07,118;UBERON:0000925,2.42e-07,118;UBERON:0006595,2.42e-07,118;UBERON:0004921,3.25e-07,114;UBERON:0002370,4.65e-07,23;UBERON:0000974,4.65e-07,23;UBERON:0004807,4.65e-07,23;UBERON:0005058,4.65e-07,23;UBERON:0003351,4.65e-07,23;UBERON:0009113,4.65e-07,23;UBERON:0003295,4.65e-07,23;UBERON:0009722,4.65e-07,23;UBERON:0005562,4.65e-07,23;UBERON:0007690,4.65e-07,23;UBERON:0001007,8.16e-07,116;UBERON:0001555,8.16e-07,116;UBERON:0007026,8.16e-07,116|phase1_expression=0.160148847104794,1.74487703819681,6.82498859084304,9.0739263392049,6.51164448930251,2.85394762250213,2.80335168714631,5.81054955487093,0.985521055061667,1.17032263160997,3.08192342805909,2.6324812468461,4.62241970814255,5.59490575481583,2.6648780945253,3.64455481301687,9.79386629379405,2.5236973228659,1.7824876368746,3.81950686618227,1.19060606211498,4.26951090163807,2.87319768052829,1.91990907352088,0.45881856213434,4.01962374880514,2.15380998079537,1.07735616342945,1.52018735565099,2.77233142735924,0.665191531965914,9.52546010189447,5.53558308826113,0,2.88851619751275,2.32728503501889,2.85837098767317,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,1.25896817975577,1.4192770370732,0.550640256485045,0.782391344348039,0.65407546914134,1.31811709640683,1.1665793944457,1.1198913730029,0,1.00669563634642,2.17608642603403,3.36093799142464,1.80081605225163,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,1.0165335962074,2.66788438833342,0,0,0,1.79760066311043,1.15265491596466,2.38486108309499,2.02508907497536,2.52389953621658,1.14260393761521,0.662605622854841,1.46988959057945,1.53352753629178,2.75765635983006,1.10115880999389,1.65993539510744,0.614426133024974,1.18697658957174,0.457438218012048,0.52091337055676,1.3959149950069,2.8138130501584,0.763991238884051,0.589257170947335,0.854230084794618,0.559198337475902,1.51452386666368,1.51143120213571,1.44932244350839,0.860423876981386,0,4.31762553310254,1.94932925234301,1.34408066129201,2.24711072210803,1.36344258062446,0.519572009205738,1.7666978725517,0.985903938436763,2.56652954828636,12.7402619853323,7.11066703153331,3.24736561516821,1.52015919285059,0.505524445014783,1.48439043634778,2.58937883647172,1.33597925158342,1.04091196059682,1.82679286987285,1.61430848079241,2.26083960828934,3.17489509266403,2.01066546127481,1.23597483867187,0.722996784599558,3.5384422077995,3.72063754879041,3.97514733228708,5.81850303762267,5.59175283654366,1.17112318804619,1.67557365450764,1.78819938646014,1.1981512450592,0.599902730993408,0.508280908292259,2.24685959107234,0.915001205637253,1.25654352112864,1.91206752211504,2.30143911597297,1.87009240103604,1.46017136760982,1.32391173005411,2.23932547098167,1.0108910337347,1.26265113531884,1.17108398666433,1.60931473103431,1.62055916824814,2.56198190320716,2.51735046859913,1.5373646434182,2.06143794031403,2.58703370739016,2.15567992932842,1.13463648100692,2.63926686245923,2.19195732427575,2.22437799380478,2.43776516565517,3.08673204611915,1.59227413454795,2.80885274925294,0.51469581422943,4.26245249093389,2.89976081549703,3.04883877975425,0.540186184383045,1.89395788468168,0.983821158737019,1.3884040159864,2.09280550275367,1.3413670069981,1.28441876603886,1.31647879930784,0.820837320395476,1.78351381000883,2.19299981137998,2.19550115291051,1.20785776884335,2.10289948564127,1.13195073617213,2.31293148088659,2.64450566663544,1.70630600428187,1.62565670302307,0.644337306610467,1.61346819698674,0.444756087689741,3.23383564391351,2.84717436926707,0.658795818896044,0.754005626400808,1.79060824837036,2.33956904542944,0.898819408654221,3.8904848977445,2.38969527905241,2.27601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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16801
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000145783_5end
|cluster_id=chr7:25689375..25689396,+
|description=CAGE_peak_4_at_Arhgef1_5end
|id=chr7:25689375..25689396,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.21e-08!29;UBERON:0003929!7.99e-08!55;UBERON:0003408!1.05e-07!24;UBERON:0006562!1.63e-07!24;UBERON:0001557!1.63e-07!24;UBERON:0001042!1.63e-07!24;UBERON:0008814!1.63e-07!24;UBERON:0009145!1.63e-07!24;UBERON:0005911!2.31e-07!69;UBERON:0002370!3.70e-07!23;UBERON:0000974!3.70e-07!23;UBERON:0004807!3.70e-07!23;UBERON:0005058!3.70e-07!23;UBERON:0003351!3.70e-07!23;UBERON:0009113!3.70e-07!23;UBERON:0003295!3.70e-07!23;UBERON:0009722!3.70e-07!23;UBERON:0005562!3.70e-07!23;UBERON:0007690!3.70e-07!23;UBERON:0004119!5.04e-07!130;UBERON:0000925!5.04e-07!130;UBERON:0006595!5.04e-07!130;UBERON:0004921!6.50e-07!126;UBERON:0004185!6.50e-07!126;UBERON:0005057!7.19e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0000077,6.32e-09,35;UBERON:0004177,1.51e-08,29;UBERON:0005057,1.51e-08,29;UBERON:0003929,7.36e-08,55;UBERON:0003408,1.32e-07,24;UBERON:0006562,2.05e-07,24;UBERON:0001557,2.05e-07,24;UBERON:0001042,2.05e-07,24;UBERON:0008814,2.05e-07,24;UBERON:0009145,2.05e-07,24;UBERON:0005911,2.15e-07,69;UBERON:0004119,2.42e-07,118;UBERON:0000925,2.42e-07,118;UBERON:0006595,2.42e-07,118;UBERON:0004921,3.25e-07,114;UBERON:0002370,4.65e-07,23;UBERON:0000974,4.65e-07,23;UBERON:0004807,4.65e-07,23;UBERON:0005058,4.65e-07,23;UBERON:0003351,4.65e-07,23;UBERON:0009113,4.65e-07,23;UBERON:0003295,4.65e-07,23;UBERON:0009722,4.65e-07,23;UBERON:0005562,4.65e-07,23;UBERON:0007690,4.65e-07,23;UBERON:0001007,8.16e-07,116;UBERON:0001555,8.16e-07,116;UBERON:0007026,8.16e-07,116
|phase1_expression=0.160148847104794,1.74487703819681,6.82498859084304,9.0739263392049,6.51164448930251,2.85394762250213,2.80335168714631,5.81054955487093,0.985521055061667,1.17032263160997,3.08192342805909,2.6324812468461,4.62241970814255,5.59490575481583,2.6648780945253,3.64455481301687,9.79386629379405,2.5236973228659,1.7824876368746,3.81950686618227,1.19060606211498,4.26951090163807,2.87319768052829,1.91990907352088,0.45881856213434,4.01962374880514,2.15380998079537,1.07735616342945,1.52018735565099,2.77233142735924,0.665191531965914,9.52546010189447,5.53558308826113,0,2.88851619751275,2.32728503501889,2.85837098767317,0.418531630736908,0,0.523523743973798,0.588231488031014,1.36609096991689,1.45653105909346,1.25896817975577,1.4192770370732,0.550640256485045,0.782391344348039,0.65407546914134,1.31811709640683,1.1665793944457,1.1198913730029,0,1.00669563634642,2.17608642603403,3.36093799142464,1.80081605225163,0.85960031981627,0.515672092277442,1.41621522601718,1.05798195854407,1.90149421051854,1.0165335962074,2.66788438833342,0,0,0,1.79760066311043,1.15265491596466,2.38486108309499,2.02508907497536,2.52389953621658,1.14260393761521,0.662605622854841,1.46988959057945,1.53352753629178,2.75765635983006,1.10115880999389,1.65993539510744,0.614426133024974,1.18697658957174,0.457438218012048,0.52091337055676,1.3959149950069,2.8138130501584,0.763991238884051,0.589257170947335,0.854230084794618,0.559198337475902,1.51452386666368,1.51143120213571,1.44932244350839,0.860423876981386,0,4.31762553310254,1.94932925234301,1.34408066129201,2.24711072210803,1.36344258062446,0.519572009205738,1.7666978725517,0.985903938436763,2.56652954828636,12.7402619853323,7.11066703153331,3.24736561516821,1.52015919285059,0.505524445014783,1.48439043634778,2.58937883647172,1.33597925158342,1.04091196059682,1.82679286987285,1.61430848079241,2.26083960828934,3.17489509266403,2.01066546127481,1.23597483867187,0.722996784599558,3.5384422077995,3.72063754879041,3.97514733228708,5.81850303762267,5.59175283654366,1.17112318804619,1.67557365450764,1.78819938646014,1.1981512450592,0.599902730993408,0.508280908292259,2.24685959107234,0.915001205637253,1.25654352112864,1.91206752211504,2.30143911597297,1.87009240103604,1.46017136760982,1.32391173005411,2.23932547098167,1.0108910337347,1.26265113531884,1.17108398666433,1.60931473103431,1.62055916824814,2.56198190320716,2.51735046859913,1.5373646434182,2.06143794031403,2.58703370739016,2.15567992932842,1.13463648100692,2.63926686245923,2.19195732427575,2.22437799380478,2.43776516565517,3.08673204611915,1.59227413454795,2.80885274925294,0.51469581422943,4.26245249093389,2.89976081549703,3.04883877975425,0.540186184383045,1.89395788468168,0.983821158737019,1.3884040159864,2.09280550275367,1.3413670069981,1.28441876603886,1.31647879930784,0.820837320395476,1.78351381000883,2.19299981137998,2.19550115291051,1.20785776884335,2.10289948564127,1.13195073617213,2.31293148088659,2.64450566663544,1.70630600428187,1.62565670302307,0.644337306610467,1.61346819698674,0.444756087689741,3.23383564391351,2.84717436926707,0.658795818896044,0.754005626400808,1.79060824837036,2.33956904542944,0.898819408654221,3.8904848977445,2.38969527905241,2.27601481143698,2.51346727741403,0,1.22190796707189,1.16371492300575,2.73529697572242,1.39120381673366,1.77132177575523,1.41298855057237,2.09775178667061,2.07516838961004,3.17005700860579,4.71741588271687,3.59779379815766,4.46292267054706,3.37648023653384,2.80088436959562,1.72617682470486,2.10775794807546,1.64736847912849,0,1.48856379067401,1.24815069245824,2.02063102357689,2.33216637578486,1.92977408545347,2.58654466233247,1.89491411770485,2.77040459951444,2.37643120085263,2.34690248288502,1.84256883185997,1.42826184531608,2.92700471786698,2.04925687338048,1.32878813789265,1.59454768657487,2.62181303545181,1.72684981865896,1.01254341007058,0,0.54390568381871,1.96705709207614,3.86311444826625,3.05046120976805,2.46144541843627,1.80328439914343,2.52470927204373,1.57754109708128,0.390438744296638,1.07711698866399,0.477937595905104,2.22798674082394,1.98153571552183,3.23848561339915,1.46127928955656,0.790575555893047,2.89189184779626,1.70328102249922,0.534196811001766,0.977321756121456,2.63952196756057,7.96470830039777,1.45668381692989,1.209294227859,1.50884063804718,1.18120757152309,1.84461088766356,1.80899805217755,2.90826983582004,1.42598951353889,2.21225730555071,3.16255825724996,1.03135543248187,2.38307724027652,0.720244376125241,2.32845630808958,2.14337035031592,0.886701168211368,1.42695054081656,0.987294123612726,1.522324745573,3.05073220482823,3.1774810629573,2.20528398054962,3.46261131177108,2.58343082713449,1.99032652262914,2.74556391207214,3.44695889464629,3.78925087618806,2.96680483216816,3.41741761595705,1.23832120777933,3.1483069652851,3.39063222608444,4.10082683163076,3.66045077130436,1.69978429993855,2.09927178485487,1.93479963326193,0.954670618015114,2.05618395827738,1.62655573701479,1.40406943068342,1.25452977608681,1.74690050996942,2.15782954215713,1.40510874733071,2.35580347785627,1.94422459937689,4.97071450469541,0.56369293868419,1.04661582230785,1.98550188548517,2.33341426012857,1.29159823477731,0.844780627453891,1.87771581833206,1.95306577265925,2.72634295506848,2.41584120826006,1.72818003754719,2.8441000856536,3.04087822935246,3.08132871494482,2.98817892848929,3.75956060901711,1.58945083825012,5.04820887983869,3.69223817936443,3.63479219813331,3.58171991278499,3.2264379243789,4.0932309910696,3.2712026157712,2.45441494581295,3.17422537061296,3.10780334723691,4.84454825691169,4.36500002546604,1.73870634628971,2.81523713176773,2.19781949120718,3.64426244434412,4.01257683228291,3.3885110557024,1.84130094602871,0.572895513439397,2.23409137046794,0.685082519770642,2.2661816921691,2.02506750069542,1.35096360967266,0.906284817968409,2.5888015587591,1.66059756134683,2.79317411380722,2.21953687480374,1.70174701947806,2.09613162627982,1.10306105070008,1.33348036680969,2.88449080134452,2.24643446714271,3.03236654116557,0.25347929989024,1.50901073108861,1.31098110457835,1.21647789569252,1.60819313075717,3.81034953026459,2.54945517078682,1.54327376370964,2.06042950401653,1.61918812147837,1.71434626192708,1.95223386775271,3.57654284920981,1.30811774969096,1.59985946706062,2.03075058940024,1.28049581010941,1.31534855718921,2.30866993537965,1.12228454331548,1.18635018124174,2.36410757701352,2.45538625901814,1.70430525304563,1.92906610981141,1.99848462350357,1.87145286756327,2.36358159453128,1.14772999241306,2.42650561031467,2.31867835620421
|short_description=p4@Arhgef1
}}

Revision as of 19:41, 4 August 2015

Short description:p4@Arhgef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Arhgef1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000145783_5end
EntrezGene:16801
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Arhgef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.63
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.26
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.06
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.80
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A91.41
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F85.05
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G22.45
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.32





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure6.32e-0935
hemopoietic organ1.51e-0829
immune organ1.51e-0829
gut epithelium7.36e-0855
gland of gut1.32e-0724
pharynx2.05e-0724
upper respiratory tract2.05e-0724
chordate pharynx2.05e-0724
pharyngeal arch system2.05e-0724
pharyngeal region of foregut2.05e-0724
endo-epithelium2.15e-0769
endoderm-derived structure2.42e-07118
endoderm2.42e-07118
presumptive endoderm2.42e-07118
subdivision of digestive tract3.25e-07114
thymus4.65e-0723
neck4.65e-0723
respiratory system epithelium4.65e-0723
hemolymphoid system gland4.65e-0723
pharyngeal epithelium4.65e-0723
thymic region4.65e-0723
pharyngeal gland4.65e-0723
entire pharyngeal arch endoderm4.65e-0723
thymus primordium4.65e-0723
early pharyngeal endoderm4.65e-0723
digestive system8.16e-07116
digestive tract8.16e-07116
primitive gut8.16e-07116
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