FFCP PHASE1:Mm9::chr1:135807612..135807626,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=447|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:135807612..135807626,-|id=chr1:135807612..135807626,-|ontology_enrichment_celltype=CL:0000222!9.07e-09!7;CL:0000680!7.29e-08!6;CL:0000183!7.29e-08!6;CL:0000187!7.29e-08!6;CL:0000056!7.29e-08!6;CL:0002453!2.96e-07!8|ontology_enrichment_celltype_v019_2=CL:0000192,2.44e-21,3;CL:0000359,2.44e-21,3;CL:0002539,2.44e-21,3;CL:0000514,2.44e-21,3;CL:0002605,2.51e-15,2;CL:0002604,2.51e-15,2;CL:0002453,4.18e-14,8;CL:0000333,2.43e-11,10;CL:0000095,2.43e-11,10;CL:0000243,2.43e-11,10;CL:0000123,2.43e-11,10;CL:0000125,2.43e-11,10;CL:0000030,2.43e-11,10;CL:0000339,2.43e-11,10;CL:0000128,3.74e-11,6;CL:0000126,3.74e-11,6;CL:0000127,3.74e-11,6;CL:0000680,5.52e-11,6;CL:0000187,5.52e-11,6;CL:0000056,5.52e-11,6;CL:0000222,1.71e-09,7;CL:0000057,3.50e-08,1;CL:0000632,3.50e-08,1;CL:0000355,1.69e-07,9;CL:0002321,4.16e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!9.12e-07!5;UBERON:0001981!9.12e-07!5;UBERON:0002049!9.12e-07!5;UBERON:0007500!9.12e-07!5;UBERON:0007798!9.12e-07!5;UBERON:0004537!9.12e-07!5;UBERON:0006965!9.12e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.44e-21,3;UBERON:0004237,2.44e-21,3;UBERON:0004695,2.44e-21,3;UBERON:0002111,2.44e-21,3;UBERON:0004178,2.44e-21,3;UBERON:0000947,3.57e-16,4;UBERON:0001637,3.57e-16,4;UBERON:0004573,3.57e-16,4;UBERON:0003509,3.57e-16,4;UBERON:0004571,3.57e-16,4;UBERON:0010191,3.57e-16,4;UBERON:0004572,3.57e-16,4;UBERON:0000055,4.59e-13,5;UBERON:0007500,4.59e-13,5;UBERON:0001981,4.59e-13,5;UBERON:0002049,4.59e-13,5;UBERON:0007798,4.59e-13,5;UBERON:0004537,4.59e-13,5;UBERON:0006965,4.59e-13,5;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.64383317748712,3.4468156614635,1.65192076945513,1.56478268869608,0.436050312760893,4.39372365468944,5.8328969722285,0.699932108126813,0,0,0,0,0.771778308107841,0.85960031981627,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0.579728977403356,1.72084775396277,0,0,1.29955283489534,0,0,0.852151612890289,0,0.70667914902068,0,3.84979432242953,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0.251333182659351,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0.159454768657487,1.14704320301017,0.345369963731791,0.723245292907558,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0.750729901804728,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p@chr1:135807612..135807626,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=447 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:135807612..135807626,- | |||
|description=CAGE_peak_at_chr1:135807612..135807626,- | |||
|id=chr1:135807612..135807626,- | |||
|ontology_enrichment_celltype=CL:0000222!9.07e-09!7;CL:0000680!7.29e-08!6;CL:0000183!7.29e-08!6;CL:0000187!7.29e-08!6;CL:0000056!7.29e-08!6;CL:0002453!2.96e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.44e-21,3;CL:0000359,2.44e-21,3;CL:0002539,2.44e-21,3;CL:0000514,2.44e-21,3;CL:0002605,2.51e-15,2;CL:0002604,2.51e-15,2;CL:0002453,4.18e-14,8;CL:0000333,2.43e-11,10;CL:0000095,2.43e-11,10;CL:0000243,2.43e-11,10;CL:0000123,2.43e-11,10;CL:0000125,2.43e-11,10;CL:0000030,2.43e-11,10;CL:0000339,2.43e-11,10;CL:0000128,3.74e-11,6;CL:0000126,3.74e-11,6;CL:0000127,3.74e-11,6;CL:0000680,5.52e-11,6;CL:0000187,5.52e-11,6;CL:0000056,5.52e-11,6;CL:0000222,1.71e-09,7;CL:0000057,3.50e-08,1;CL:0000632,3.50e-08,1;CL:0000355,1.69e-07,9;CL:0002321,4.16e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!9.12e-07!5;UBERON:0001981!9.12e-07!5;UBERON:0002049!9.12e-07!5;UBERON:0007500!9.12e-07!5;UBERON:0007798!9.12e-07!5;UBERON:0004537!9.12e-07!5;UBERON:0006965!9.12e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.44e-21,3;UBERON:0004237,2.44e-21,3;UBERON:0004695,2.44e-21,3;UBERON:0002111,2.44e-21,3;UBERON:0004178,2.44e-21,3;UBERON:0000947,3.57e-16,4;UBERON:0001637,3.57e-16,4;UBERON:0004573,3.57e-16,4;UBERON:0003509,3.57e-16,4;UBERON:0004571,3.57e-16,4;UBERON:0010191,3.57e-16,4;UBERON:0004572,3.57e-16,4;UBERON:0000055,4.59e-13,5;UBERON:0007500,4.59e-13,5;UBERON:0001981,4.59e-13,5;UBERON:0002049,4.59e-13,5;UBERON:0007798,4.59e-13,5;UBERON:0004537,4.59e-13,5;UBERON:0006965,4.59e-13,5;UBERON:0001134,1.69e-07,9;UBERON:0002036,1.69e-07,9;UBERON:0002385,1.69e-07,9;UBERON:0000486,1.69e-07,9;UBERON:0007503,1.69e-07,9;UBERON:0001015,1.69e-07,9;UBERON:0002329,1.69e-07,9;UBERON:0003082,1.69e-07,9;UBERON:0003059,1.69e-07,9;UBERON:0007282,1.69e-07,9;UBERON:0004290,1.69e-07,9;UBERON:0009618,1.69e-07,9;UBERON:0000383,8.50e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,2.64383317748712,3.4468156614635,1.65192076945513,1.56478268869608,0.436050312760893,4.39372365468944,5.8328969722285,0.699932108126813,0,0,0,0,0.771778308107841,0.85960031981627,0.515672092277442,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0.579728977403356,1.72084775396277,0,0,1.29955283489534,0,0,0.852151612890289,0,0.70667914902068,0,3.84979432242953,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0.251333182659351,0,0.578397427679647,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0.32833492815819,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0,0,1.43768206527355,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0.195133647857799,0.157635144106191,0,0.159454768657487,1.14704320301017,0.345369963731791,0.723245292907558,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0.477937595905104,0,0,0.809621403349789,0.292255857911312,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0.220528398054962,0.16488625294148,0,0,0.238744688006273,0.164140899745061,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0.750729901804728,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr1:135807612..135807626,- | |||
}} |
Latest revision as of 19:43, 4 August 2015
Short description: | p@chr1:135807612..135807626, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135807612..135807626, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.44e-21 | 3 |
vascular associated smooth muscle cell | 2.44e-21 | 3 |
aortic smooth muscle cell | 2.44e-21 | 3 |
smooth muscle myoblast | 2.44e-21 | 3 |
astrocyte of the cerebral cortex | 2.51e-15 | 2 |
astrocyte of the hippocampus | 2.51e-15 | 2 |
oligodendrocyte precursor cell | 4.18e-14 | 8 |
migratory neural crest cell | 2.43e-11 | 10 |
neuron associated cell | 2.43e-11 | 10 |
glial cell (sensu Vertebrata) | 2.43e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.43e-11 | 10 |
glial cell | 2.43e-11 | 10 |
glioblast | 2.43e-11 | 10 |
glioblast (sensu Vertebrata) | 2.43e-11 | 10 |
oligodendrocyte | 3.74e-11 | 6 |
macroglial cell | 3.74e-11 | 6 |
astrocyte | 3.74e-11 | 6 |
muscle precursor cell | 5.52e-11 | 6 |
muscle cell | 5.52e-11 | 6 |
myoblast | 5.52e-11 | 6 |
mesodermal cell | 1.71e-09 | 7 |
fibroblast | 3.50e-08 | 1 |
hepatic stellate cell | 3.50e-08 | 1 |
multi-potent skeletal muscle stem cell | 1.69e-07 | 9 |
embryonic cell | 4.16e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.44e-21 | 3 |
blood vessel smooth muscle | 2.44e-21 | 3 |
arterial system smooth muscle | 2.44e-21 | 3 |
artery smooth muscle tissue | 2.44e-21 | 3 |
aorta smooth muscle tissue | 2.44e-21 | 3 |
aorta | 3.57e-16 | 4 |
artery | 3.57e-16 | 4 |
systemic artery | 3.57e-16 | 4 |
arterial blood vessel | 3.57e-16 | 4 |
systemic arterial system | 3.57e-16 | 4 |
aortic system | 3.57e-16 | 4 |
arterial system | 3.57e-16 | 4 |
vessel | 4.59e-13 | 5 |
epithelial tube open at both ends | 4.59e-13 | 5 |
blood vessel | 4.59e-13 | 5 |
vasculature | 4.59e-13 | 5 |
vascular system | 4.59e-13 | 5 |
blood vasculature | 4.59e-13 | 5 |
vascular cord | 4.59e-13 | 5 |
skeletal muscle tissue | 1.69e-07 | 9 |
striated muscle tissue | 1.69e-07 | 9 |
muscle tissue | 1.69e-07 | 9 |
multilaminar epithelium | 1.69e-07 | 9 |
epithelial vesicle | 1.69e-07 | 9 |
musculature | 1.69e-07 | 9 |
somite | 1.69e-07 | 9 |
myotome | 1.69e-07 | 9 |
presomitic mesoderm | 1.69e-07 | 9 |
presumptive segmental plate | 1.69e-07 | 9 |
dermomyotome | 1.69e-07 | 9 |
trunk paraxial mesoderm | 1.69e-07 | 9 |
musculature of body | 8.50e-07 | 10 |