FFCP PHASE1:Mm9::chr1:135808898..135808920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=447 | |MCL_coexpression_id=447 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135808898..135808920,- | |||
|description=CAGE_peak_at_chr1:135808898..135808920,- | |description=CAGE_peak_at_chr1:135808898..135808920,- | ||
|id=chr1:135808898..135808920,- | |id=chr1:135808898..135808920,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.65e-13,3;CL:0000359,1.65e-13,3;CL:0002539,1.65e-13,3;CL:0000514,1.65e-13,3;CL:0000680,1.66e-11,6;CL:0000187,1.66e-11,6;CL:0000056,1.66e-11,6;CL:0000222,7.04e-10,7;CL:0002605,9.35e-10,2;CL:0002604,9.35e-10,2;CL:0000355,1.06e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.49e-17,4;UBERON:0001637,1.49e-17,4;UBERON:0004573,1.49e-17,4;UBERON:0003509,1.49e-17,4;UBERON:0004571,1.49e-17,4;UBERON:0010191,1.49e-17,4;UBERON:0004572,1.49e-17,4;UBERON:0000055,4.49e-14,5;UBERON:0007500,4.49e-14,5;UBERON:0001981,4.49e-14,5;UBERON:0002049,4.49e-14,5;UBERON:0007798,4.49e-14,5;UBERON:0004537,4.49e-14,5;UBERON:0006965,4.49e-14,5;UBERON:0001135,1.65e-13,3;UBERON:0004237,1.65e-13,3;UBERON:0004695,1.65e-13,3;UBERON:0002111,1.65e-13,3;UBERON:0004178,1.65e-13,3;UBERON:0001134,1.06e-07,9;UBERON:0002036,1.06e-07,9;UBERON:0002385,1.06e-07,9;UBERON:0000486,1.06e-07,9;UBERON:0007503,1.06e-07,9;UBERON:0001015,1.06e-07,9;UBERON:0002329,1.06e-07,9;UBERON:0003082,1.06e-07,9;UBERON:0003059,1.06e-07,9;UBERON:0007282,1.06e-07,9;UBERON:0004290,1.06e-07,9;UBERON:0009618,1.06e-07,9;UBERON:0000383,6.15e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,7.05022180663233,8.11015449756117,1.28482726513177,0.782391344348039,0.218025156380447,3.29529274101708,3.69416808241138,0,0,0,0,0,0.514518872071894,1.43266719969378,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,1.02258193546835,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,3.32578520915797,0,0.808834249737046,1.10420759230197,0,0,0,0.83778682725382,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.56748166682099,0,0.439100230582101,0.805238512562231,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,2.69645822596266,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0.179397413521912,1.4473305640901,2.40179147216586,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.491589944147214,0.345369963731791,1.73578870297814,0,0,0,1.10374698521893,0,0,0,0.504941854408746,0,0.780877488593277,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0.968786560175433,0.0603129249281559,0.238744688006273,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0.457556346413045,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.15913756419314,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,2.48674831689496,0.882365676478062,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,7.05022180663233,8.11015449756117,1.28482726513177,0.782391344348039,0.218025156380447,3.29529274101708,3.69416808241138,0,0,0,0,0,0.514518872071894,1.43266719969378,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,1.02258193546835,0.259786004602869,0,0,1.28326477414318,0,0,0,0,0,0.34255163915718,0.258937883647172,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,3.32578520915797,0,0.808834249737046,1.10420759230197,0,0,0,0.83778682725382,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.56748166682099,0,0.439100230582101,0.805238512562231,0,0.205809224758569,0,0.264450566663544,0,0,0,0,0,0,1.42358718463353,0,0.251335208800269,0,0.19496408711912,2.69645822596266,0.648414149624083,0.398282546508734,0.189667900953082,0,0,0.203651327845314,0,0,0,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0.324270453550071,0,2.87536413054709,0.372140947668503,0,0.252578877947112,0.179397413521912,1.4473305640901,2.40179147216586,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0.491589944147214,0.345369963731791,1.73578870297814,0,0,0,1.10374698521893,0,0,0,0.504941854408746,0,0.780877488593277,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0.178065603667255,0.162886959353576,0.824850614862677,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0.968786560175433,0.0603129249281559,0.238744688006273,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,0.206386867963223,0,0,0,0.457556346413045,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0.495920734352016,0.523511883968059,0.129614973291793,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.15913756419314,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,2.48674831689496,0.882365676478062,0.927471342481686 | ||
|short_description=p@chr1:135808898..135808920,- | |short_description=p@chr1:135808898..135808920,- | ||
}} | }} |
Latest revision as of 19:44, 4 August 2015
Short description: | p@chr1:135808898..135808920, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135808898..135808920, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.65e-13 | 3 |
vascular associated smooth muscle cell | 1.65e-13 | 3 |
aortic smooth muscle cell | 1.65e-13 | 3 |
smooth muscle myoblast | 1.65e-13 | 3 |
muscle precursor cell | 1.66e-11 | 6 |
muscle cell | 1.66e-11 | 6 |
myoblast | 1.66e-11 | 6 |
mesodermal cell | 7.04e-10 | 7 |
astrocyte of the cerebral cortex | 9.35e-10 | 2 |
astrocyte of the hippocampus | 9.35e-10 | 2 |
multi-potent skeletal muscle stem cell | 1.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.49e-17 | 4 |
artery | 1.49e-17 | 4 |
systemic artery | 1.49e-17 | 4 |
arterial blood vessel | 1.49e-17 | 4 |
systemic arterial system | 1.49e-17 | 4 |
aortic system | 1.49e-17 | 4 |
arterial system | 1.49e-17 | 4 |
vessel | 4.49e-14 | 5 |
epithelial tube open at both ends | 4.49e-14 | 5 |
blood vessel | 4.49e-14 | 5 |
vasculature | 4.49e-14 | 5 |
vascular system | 4.49e-14 | 5 |
blood vasculature | 4.49e-14 | 5 |
vascular cord | 4.49e-14 | 5 |
smooth muscle tissue | 1.65e-13 | 3 |
blood vessel smooth muscle | 1.65e-13 | 3 |
arterial system smooth muscle | 1.65e-13 | 3 |
artery smooth muscle tissue | 1.65e-13 | 3 |
aorta smooth muscle tissue | 1.65e-13 | 3 |
skeletal muscle tissue | 1.06e-07 | 9 |
striated muscle tissue | 1.06e-07 | 9 |
muscle tissue | 1.06e-07 | 9 |
multilaminar epithelium | 1.06e-07 | 9 |
epithelial vesicle | 1.06e-07 | 9 |
musculature | 1.06e-07 | 9 |
somite | 1.06e-07 | 9 |
myotome | 1.06e-07 | 9 |
presomitic mesoderm | 1.06e-07 | 9 |
presumptive segmental plate | 1.06e-07 | 9 |
dermomyotome | 1.06e-07 | 9 |
trunk paraxial mesoderm | 1.06e-07 | 9 |
musculature of body | 6.15e-07 | 10 |