FFCP PHASE1:Mm9::chr1:135809003..135809026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=447 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:135809003..135809026,- | |||
|description=CAGE_peak_at_chr1:135809003..135809026,- | |||
|id=chr1:135809003..135809026,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.47e-23,2;CL:0002604,8.47e-23,2;CL:0000192,7.42e-16,3;CL:0000359,7.42e-16,3;CL:0002539,7.42e-16,3;CL:0000514,7.42e-16,3;CL:0000680,2.07e-08,6;CL:0000187,2.07e-08,6;CL:0000056,2.07e-08,6;CL:0000128,2.89e-08,6;CL:0000126,2.89e-08,6;CL:0000127,2.89e-08,6;CL:0000222,2.46e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,7.67e-26,4;UBERON:0001637,7.67e-26,4;UBERON:0004573,7.67e-26,4;UBERON:0003509,7.67e-26,4;UBERON:0004571,7.67e-26,4;UBERON:0010191,7.67e-26,4;UBERON:0004572,7.67e-26,4;UBERON:0000055,7.72e-21,5;UBERON:0007500,7.72e-21,5;UBERON:0001981,7.72e-21,5;UBERON:0002049,7.72e-21,5;UBERON:0007798,7.72e-21,5;UBERON:0004537,7.72e-21,5;UBERON:0006965,7.72e-21,5;UBERON:0001135,7.42e-16,3;UBERON:0004237,7.42e-16,3;UBERON:0004695,7.42e-16,3;UBERON:0002111,7.42e-16,3;UBERON:0004178,7.42e-16,3;UBERON:0001044,4.30e-12,1;UBERON:0001736,4.30e-12,1;UBERON:0003293,4.30e-12,1;UBERON:0003294,4.30e-12,1;UBERON:0001829,4.30e-12,1;UBERON:0010047,4.30e-12,1;UBERON:0000167,4.30e-12,1;UBERON:0006298,4.30e-12,1;UBERON:0000998,7.11e-12,1;UBERON:0007194,7.11e-12,1;UBERON:0006868,7.11e-12,1;UBERON:0001954,3.27e-07,7;UBERON:0003022,3.27e-07,7;UBERON:0002421,3.27e-07,7;UBERON:0000349,3.27e-07,7;UBERON:0002600,3.27e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,4.90997590104751,4.76471576731718,0.734187008646726,0,0,3.29529274101708,4.08302788055995,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0,0.681721290312231,0,0,0,0,0,0,0,0,0,0,0,0.742210695324124,0,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,5.78397427679647,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0,0.291480836629851,0.370850604021019,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,4.90997590104751,4.76471576731718,0.734187008646726,0,0,3.29529274101708,4.08302788055995,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,0,0,0,0.681721290312231,0,0,0,0,0,0,0,0,0,0,0,0.742210695324124,0,0.304465478312141,0,0.150722640552623,0,0,0.247194967734374,5.78397427679647,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0.398282546508734,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.156998727841375,0,0,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0,0,0.482443521363367,1.66277871149944,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0,0.827810238914197,0,0,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,0.425820255624806,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0,0,0,0.21183207086382,0.661585194164886,0.32977250588296,0.161464426695906,0.241251699712623,0.358117032009409,0,0.291480836629851,0.370850604021019,0.170870880797853,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.129614973291793,1.86401793926078,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr1:135809003..135809026,- | |||
}} | }} |
Latest revision as of 19:44, 4 August 2015
Short description: | p@chr1:135809003..135809026, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135809003..135809026, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.47e-23 | 2 |
astrocyte of the hippocampus | 8.47e-23 | 2 |
smooth muscle cell | 7.42e-16 | 3 |
vascular associated smooth muscle cell | 7.42e-16 | 3 |
aortic smooth muscle cell | 7.42e-16 | 3 |
smooth muscle myoblast | 7.42e-16 | 3 |
muscle precursor cell | 2.07e-08 | 6 |
muscle cell | 2.07e-08 | 6 |
myoblast | 2.07e-08 | 6 |
oligodendrocyte | 2.89e-08 | 6 |
macroglial cell | 2.89e-08 | 6 |
astrocyte | 2.89e-08 | 6 |
mesodermal cell | 2.46e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
aorta | 7.67e-26 | 4 |
artery | 7.67e-26 | 4 |
systemic artery | 7.67e-26 | 4 |
arterial blood vessel | 7.67e-26 | 4 |
systemic arterial system | 7.67e-26 | 4 |
aortic system | 7.67e-26 | 4 |
arterial system | 7.67e-26 | 4 |
vessel | 7.72e-21 | 5 |
epithelial tube open at both ends | 7.72e-21 | 5 |
blood vessel | 7.72e-21 | 5 |
vasculature | 7.72e-21 | 5 |
vascular system | 7.72e-21 | 5 |
blood vasculature | 7.72e-21 | 5 |
vascular cord | 7.72e-21 | 5 |
smooth muscle tissue | 7.42e-16 | 3 |
blood vessel smooth muscle | 7.42e-16 | 3 |
arterial system smooth muscle | 7.42e-16 | 3 |
artery smooth muscle tissue | 7.42e-16 | 3 |
aorta smooth muscle tissue | 7.42e-16 | 3 |
saliva-secreting gland | 4.30e-12 | 1 |
submandibular gland | 4.30e-12 | 1 |
gland of oral region | 4.30e-12 | 1 |
gland of foregut | 4.30e-12 | 1 |
major salivary gland | 4.30e-12 | 1 |
oral gland | 4.30e-12 | 1 |
oral cavity | 4.30e-12 | 1 |
submandibular gland primordium | 4.30e-12 | 1 |
seminal vesicle | 7.11e-12 | 1 |
vesicular gland | 7.11e-12 | 1 |
seminal fluid secreting gland | 7.11e-12 | 1 |
Ammon's horn | 3.27e-07 | 7 |
lobe parts of cerebral cortex | 3.27e-07 | 7 |
hippocampal formation | 3.27e-07 | 7 |
limbic system | 3.27e-07 | 7 |
limbic lobe | 3.27e-07 | 7 |