FFCP PHASE1:Mm9::chr12:114665171..114665182,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114665171..114665182,- | |||
|description=CAGE_peak_at_chr12:114665171..114665182,- | |description=CAGE_peak_at_chr12:114665171..114665182,- | ||
|id=chr12:114665171..114665182,- | |id=chr12:114665171..114665182,- | ||
|ontology_enrichment_celltype=CL:0002031!3.20e-08!25;CL:0000988!5.14e-08!32;CL:0002032!5.14e-08!32;CL:0000037!5.14e-08!32;CL:0000566!5.14e-08!32;CL:0000837!5.14e-08!32;CL:0000553!1.43e-07!6;CL:0000556!1.43e-07!6;CL:0000838!4.46e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.50e-26,6;CL:0000556,2.50e-26,6;CL:0000050,1.41e-17,9;CL:0002031,1.10e-15,25;CL:0000988,3.38e-15,32;CL:0002032,3.38e-15,32;CL:0000037,3.38e-15,32;CL:0000837,3.38e-15,32;CL:0000839,3.60e-12,13;CL:0000049,1.30e-11,19;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000763,7.03e-10,16;CL:0002027,4.66e-09,3;CL:0002006,4.66e-09,3;CL:0002024,4.66e-09,3;CL:0000219,1.29e-08,54;CL:0000945,7.32e-08,1;CL:0000236,7.32e-08,1;CL:0000826,7.32e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.99e-19!48;UBERON:0004177!9.48e-17!29;UBERON:0002390!4.60e-16!45;UBERON:0003061!4.60e-16!45;UBERON:0002405!6.95e-14!70;UBERON:0002370!1.44e-11!23;UBERON:0000974!1.44e-11!23;UBERON:0004807!1.44e-11!23;UBERON:0005058!1.44e-11!23;UBERON:0003351!1.44e-11!23;UBERON:0009113!1.44e-11!23;UBERON:0003295!1.44e-11!23;UBERON:0009722!1.44e-11!23;UBERON:0005562!1.44e-11!23;UBERON:0007690!1.44e-11!23;UBERON:0006562!6.45e-11!24;UBERON:0003408!6.45e-11!24;UBERON:0001557!6.45e-11!24;UBERON:0001042!6.45e-11!24;UBERON:0008814!6.45e-11!24;UBERON:0009145!6.45e-11!24;UBERON:0003081!1.77e-10!88;UBERON:0005057!4.86e-10!51;UBERON:0000072!2.91e-09!27;UBERON:0000063!2.90e-07!35;UBERON:0002106!7.80e-07!6;UBERON:0004457!7.80e-07!6;UBERON:0000042!7.80e-07!6;UBERON:0004854!7.80e-07!6;UBERON:0009034!7.80e-07!6;UBERON:0002095!7.80e-07!6;UBERON:0004782!7.80e-07!6;UBERON:0003281!7.80e-07!6;UBERON:0009664!7.80e-07!6;UBERON:0002296!7.80e-07!6;UBERON:0005602!7.80e-07!6;UBERON:0001179!7.80e-07!6;UBERON:0006293!7.80e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.78e-12,48;UBERON:0002405,4.78e-12,48;UBERON:0002390,2.43e-10,45;UBERON:0003061,2.43e-10,45;UBERON:0002384,2.76e-10,46;UBERON:0002106,6.77e-10,6;UBERON:0004457,6.77e-10,6;UBERON:0000042,6.77e-10,6;UBERON:0004854,6.77e-10,6;UBERON:0009034,6.77e-10,6;UBERON:0002095,6.77e-10,6;UBERON:0004782,6.77e-10,6;UBERON:0003281,6.77e-10,6;UBERON:0009664,6.77e-10,6;UBERON:0002296,6.77e-10,6;UBERON:0005602,6.77e-10,6;UBERON:0001179,6.77e-10,6;UBERON:0006293,6.77e-10,6;UBERON:0002371,7.03e-10,16;UBERON:0000029,5.41e-08,1;UBERON:0001097,5.41e-08,1;UBERON:0003968,5.41e-08,1;UBERON:0001467,5.41e-08,1;UBERON:0001474,3.68e-07,22;UBERON:0004765,3.68e-07,22;UBERON:0001434,3.68e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0.0797721589953364,0.513602189793617,0,2.33176833270964,1.01237633694913,0,4.57420139769445,6.58149281307546,2.97072756258621,0,6.45391182805754,5.22399578277871,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47344709117929,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0.255457055208591,1.07833612055328,0,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,0.169978429993855,0.419854356970974,0.138199973804424,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.716106782669926,0.993406773906324,0.841368146639782,0.443068581523732,0.908698049533329,0.914481679859998,0.403304740547362,0.292373642219257,0.673482891482306,1.16876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0.0797721589953364,0.513602189793617,0,2.33176833270964,1.01237633694913,0,4.57420139769445,6.58149281307546,2.97072756258621,0,6.45391182805754,5.22399578277871,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47344709117929,0,0,0,0,0,0,0,0,0.433798070759735,0,0,0.220841518460394,0,0,0,0,0.255457055208591,1.07833612055328,0,0.635351135365324,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0,0,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,2.39219233116994,0,0.185194527369712,0.941842285023455,1.36694227721025,1.37266903923914,0.169978429993855,0.419854356970974,0.138199973804424,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0.389762468933385,0.716106782669926,0.993406773906324,0.841368146639782,0.443068581523732,0.908698049533329,0.914481679859998,0.403304740547362,0.292373642219257,0.673482891482306,1.16876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr12:114665171..114665182,- | |short_description=p@chr12:114665171..114665182,- | ||
}} | }} |
Latest revision as of 19:55, 4 August 2015
Short description: | p@chr12:114665171..114665182, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114665171..114665182, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.50e-26 | 6 |
megakaryocyte | 2.50e-26 | 6 |
megakaryocyte-erythroid progenitor cell | 1.41e-17 | 9 |
hematopoietic lineage restricted progenitor cell | 1.10e-15 | 25 |
hematopoietic cell | 3.38e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.38e-15 | 32 |
hematopoietic stem cell | 3.38e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.38e-15 | 32 |
myeloid lineage restricted progenitor cell | 3.60e-12 | 13 |
common myeloid progenitor | 1.30e-11 | 19 |
connective tissue cell | 2.76e-10 | 46 |
mesenchymal cell | 2.76e-10 | 46 |
myeloid cell | 7.03e-10 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 4.66e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.66e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.66e-09 | 3 |
motile cell | 1.29e-08 | 54 |
lymphocyte of B lineage | 7.32e-08 | 1 |
B cell | 7.32e-08 | 1 |
pro-B cell | 7.32e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.78e-12 | 48 |
immune system | 4.78e-12 | 48 |
hematopoietic system | 2.43e-10 | 45 |
blood island | 2.43e-10 | 45 |
connective tissue | 2.76e-10 | 46 |
spleen | 6.77e-10 | 6 |
cavity lining | 6.77e-10 | 6 |
serous membrane | 6.77e-10 | 6 |
gastrointestinal system mesentery | 6.77e-10 | 6 |
stomach region | 6.77e-10 | 6 |
mesentery | 6.77e-10 | 6 |
gastrointestinal system serosa | 6.77e-10 | 6 |
mesentery of stomach | 6.77e-10 | 6 |
gut mesentery | 6.77e-10 | 6 |
dorsal mesentery | 6.77e-10 | 6 |
dorsal mesogastrium | 6.77e-10 | 6 |
peritoneal cavity | 6.77e-10 | 6 |
spleen primordium | 6.77e-10 | 6 |
bone marrow | 7.03e-10 | 16 |
lymph node | 5.41e-08 | 1 |
axillary lymph node | 5.41e-08 | 1 |
peripheral lymph node | 5.41e-08 | 1 |
shoulder | 5.41e-08 | 1 |
bone element | 3.68e-07 | 22 |
skeletal element | 3.68e-07 | 22 |
skeletal system | 3.68e-07 | 22 |