FFCP PHASE1:Mm9::chr6:112996157..112996171,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:112996157..112996171,-
|short_description=p@chr6:112996157..112996171,-
|description=CAGE_peak_at_chr6:112996157..112996171,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=255 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:112996157..112996171,- | |||
|description=CAGE_peak_at_chr6:112996157..112996171,- | |||
|id=chr6:112996157..112996171,- | |||
|ontology_enrichment_celltype=CL:0000034!4.51e-07!97;CL:0000063!4.85e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.02e-09,46;CL:0000134,3.02e-09,46;CL:0000791,1.03e-08,9;CL:0000789,1.03e-08,9;CL:0002420,1.03e-08,9;CL:0002419,1.03e-08,9;CL:0000790,1.03e-08,9;CL:0000723,1.34e-08,91;CL:0000048,1.34e-08,91;CL:0000988,7.58e-08,32;CL:0002032,7.58e-08,32;CL:0000037,7.58e-08,32;CL:0000837,7.58e-08,32;CL:0000219,1.04e-07,54;CL:0000624,1.43e-07,8;CL:0000034,1.84e-07,97;CL:0000838,1.92e-07,12;CL:0002031,3.33e-07,25;CL:0000738,8.10e-07,17;CL:0002087,8.10e-07,17;CL:0000084,9.02e-07,11;CL:0000827,9.02e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,4.70e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.02e-09,46 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,0.500895729946347,1.51091344720701,2.33612640595526,1.16210991097419,1.12630977721333,1.17032263160997,2.91070545983358,1.27635454392538,1.02720437958723,1.39872643870396,0.666219523631325,0,0,0,0.137114433605739,0,0.850432901510698,0.595745707205312,0.261199789138935,0.639969691173627,1.37645568640302,1.14846392823004,0.86152399231815,0.646413698057667,0.760093677825496,1.00812051903972,1.33038306393183,8.89042942843484,5.53558308826113,15.8481681015439,6.35473563452804,2.65975432573588,3.06254034393554,1.67412652294763,3.1253413780952,2.61761871986899,0.588231488031014,2.04913645487534,1.45653105909346,0.503587271902309,0.811015449756117,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,1.17447824240415,1.45072428402269,2.35265659399725,0,0.85960031981627,0,0.404632921719196,1.5869729378161,0.633831403506179,0.338844532069132,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,0,0.518448061542388,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.670918297127655,0.919218786610021,0,0.766124028511126,0.921639199537461,0.395658863190582,0.548925861614458,0,0.279182999001381,1.68828783009504,0.61119299110724,0,0.569486723196412,0.372798891650601,0.151452386666368,0,3.18850937571846,0.860423876981386,3.39985666853875,0.539703191637817,0,1.34408066129201,0.140444420131752,1.53387290320252,0.779358013808606,0.70667914902068,0.985903938436763,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.5709193985953,0.517875767294343,0.742210695324124,0.173485326766136,1.21786191324856,0.461230994512117,0.60289056221049,0.117588707135705,0.251333182659351,0.741584903203122,0,0.884610551949874,0.161766849947409,0.441683036920787,0,3.72783522436244,0.292780797011547,0.41889341362691,0.510914110417183,1.55759661857696,1.79970819298022,0.889491589511453,0.299581278809645,0,0.251308704225729,0.521472960576829,1.27857728665165,0.41557608911912,0,0.101839363850316,0.497627882440372,1.51633655060205,0.841767423545896,0.910843100738926,1.14951052216736,0.360124259610698,1.35634336052144,0.680364991513279,1.0249097622788,0.562210347358373,0.776110112217047,0.215567992932842,0.945530400839096,0,0,0.278047249225598,0.348252166522167,0,1.39323986772945,0.702213187313235,0.772043721344145,1.98914449576915,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.324275238183423,0.438599962275997,0.878200461164203,0.134206418760372,0.630869845692382,0.205809224758569,0.330418782983798,0.793351699990633,0,0.464473343720877,1.03093969057675,0,0.667134131534611,0.760902504450237,0.949058123089023,0.164698954724011,0,0,0.19496408711912,2.69645822596266,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0.610953983535943,0.775809948670503,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,1.00107063429656,0.589676985339609,0.899448449539415,0.608580364165509,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0,0.179397413521912,0.482443521363367,0,0.189491411770485,0,0.509235257325564,0.469380496577004,1.00503754465089,0.476087281772027,0,0.472905432318573,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,1.08781136763742,0,0.275936746304732,0.160550589987792,0.468846746368813,0.327869890753351,0.252470927204373,0.315508219416257,1.56175497718655,0.861693590931196,1.43381278771531,1.55959071857676,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,0,0.728341908464944,1.209294227859,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,1.70219802876894,0.540183282093931,1.55230420539305,1.07168517515796,1.41872186913819,0.891844088010353,0.329098041204242,1.8267896946876,0.23467170806371,0,1.10264199027481,1.48397627647332,0.645857706783622,0.482503399425247,0.477489376012546,0.656563598980245,0.291480836629851,0.741701208042039,1.02522528478712,0.412773735926445,1.11116716421827,0.376736914009382,0.546776910884101,0.686334519619568,0.679913719975421,0.839708713941948,0.829199842826543,0,0.474503990371703,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,1.8146096260851,0,1.69107881605257,0.299033092087958,0.330916980914195,0.388902376688095,0.387479470433193,0.844780627453891,0.352071715937262,1.0416350787516,0,1.93267296660805,0.864090018773596,0,0.608175645870493,0.513554785824136,0.25984164595559,0.716106782669926,0.198681354781265,0.360586348559907,0.147689527174577,0.605798699688886,0.15241361331,0.302478555410522,0.292373642219257,0.481059208201647,0.584384510907845,0.453460767230423,0.665957860122194,0.807424709485281,0.503653849092235,1.15913756419314,0,0.73260649706906,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,1.35096360967266,0,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.448176066834085,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0,0.263069711437843,0.271608227691724,0,0.593175090620871,0.197008964751127,0,0.929621047115796,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0.927471342481686 | |phase1_expression=0.160148847104794,0,0.454999239389536,0.60492842261366,0.500895729946347,1.51091344720701,2.33612640595526,1.16210991097419,1.12630977721333,1.17032263160997,2.91070545983358,1.27635454392538,1.02720437958723,1.39872643870396,0.666219523631325,0,0,0,0.137114433605739,0,0.850432901510698,0.595745707205312,0.261199789138935,0.639969691173627,1.37645568640302,1.14846392823004,0.86152399231815,0.646413698057667,0.760093677825496,1.00812051903972,1.33038306393183,8.89042942843484,5.53558308826113,15.8481681015439,6.35473563452804,2.65975432573588,3.06254034393554,1.67412652294763,3.1253413780952,2.61761871986899,0.588231488031014,2.04913645487534,1.45653105909346,0.503587271902309,0.811015449756117,0.550640256485045,0,0.218025156380447,0,0.194429899074283,0.419959264876088,1.43752564364972,1.17447824240415,1.45072428402269,2.35265659399725,0,0.85960031981627,0,0.404632921719196,1.5869729378161,0.633831403506179,0.338844532069132,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,0.898800331555214,0,0.518448061542388,0.270011876663381,0.210324961351382,0,0.220868540951614,0.122490799214954,0.670918297127655,0.919218786610021,0,0.766124028511126,0.921639199537461,0.395658863190582,0.548925861614458,0,0.279182999001381,1.68828783009504,0.61119299110724,0,0.569486723196412,0.372798891650601,0.151452386666368,0,3.18850937571846,0.860423876981386,3.39985666853875,0.539703191637817,0,1.34408066129201,0.140444420131752,1.53387290320252,0.779358013808606,0.70667914902068,0.985903938436763,0,0,0,1.08245520505607,0.760079596425296,1.51657333504435,0.5709193985953,0.517875767294343,0.742210695324124,0.173485326766136,1.21786191324856,0.461230994512117,0.60289056221049,0.117588707135705,0.251333182659351,0.741584903203122,0,0.884610551949874,0.161766849947409,0.441683036920787,0,3.72783522436244,0.292780797011547,0.41889341362691,0.510914110417183,1.55759661857696,1.79970819298022,0.889491589511453,0.299581278809645,0,0.251308704225729,0.521472960576829,1.27857728665165,0.41557608911912,0,0.101839363850316,0.497627882440372,1.51633655060205,0.841767423545896,0.910843100738926,1.14951052216736,0.360124259610698,1.35634336052144,0.680364991513279,1.0249097622788,0.562210347358373,0.776110112217047,0.215567992932842,0.945530400839096,0,0,0.278047249225598,0.348252166522167,0,1.39323986772945,0.702213187313235,0.772043721344145,1.98914449576915,0,0,0.180062061461015,0,0.196764231747404,0.308534225774757,0,0,0.350296027101508,0,0,0.324275238183423,0.438599962275997,0.878200461164203,0.134206418760372,0.630869845692382,0.205809224758569,0.330418782983798,0.793351699990633,0,0.464473343720877,1.03093969057675,0,0.667134131534611,0.760902504450237,0.949058123089023,0.164698954724011,0,0,0.19496408711912,2.69645822596266,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0.610953983535943,0.775809948670503,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,1.00107063429656,0.589676985339609,0.899448449539415,0.608580364165509,0.72353147925725,1.2731292589071,0.863088412352432,0.810676133875177,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0,0.179397413521912,0.482443521363367,0,0.189491411770485,0,0.509235257325564,0.469380496577004,1.00503754465089,0.476087281772027,0,0.472905432318573,0,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,1.50791283939272,1.08781136763742,0,0.275936746304732,0.160550589987792,0.468846746368813,0.327869890753351,0.252470927204373,0.315508219416257,1.56175497718655,0.861693590931196,1.43381278771531,1.55959071857676,1.69845918473299,0.809621403349789,0.876767573733936,0.395287777946524,0.642642632843614,0.851640511249612,0.35613120733451,0.162886959353576,0.494910368917606,0,0.728341908464944,1.209294227859,0.565815239267694,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,1.05418608574999,0,1.70219802876894,0.540183282093931,1.55230420539305,1.07168517515796,1.41872186913819,0.891844088010353,0.329098041204242,1.8267896946876,0.23467170806371,0,1.10264199027481,1.48397627647332,0.645857706783622,0.482503399425247,0.477489376012546,0.656563598980245,0.291480836629851,0.741701208042039,1.02522528478712,0.412773735926445,1.11116716421827,0.376736914009382,0.546776910884101,0.686334519619568,0.679913719975421,0.839708713941948,0.829199842826543,0,0.474503990371703,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.41326727862668,0.523511883968059,1.8146096260851,0,1.69107881605257,0.299033092087958,0.330916980914195,0.388902376688095,0.387479470433193,0.844780627453891,0.352071715937262,1.0416350787516,0,1.93267296660805,0.864090018773596,0,0.608175645870493,0.513554785824136,0.25984164595559,0.716106782669926,0.198681354781265,0.360586348559907,0.147689527174577,0.605798699688886,0.15241361331,0.302478555410522,0.292373642219257,0.481059208201647,0.584384510907845,0.453460767230423,0.665957860122194,0.807424709485281,0.503653849092235,1.15913756419314,0,0.73260649706906,0.214368379079066,0.501572104035363,1.12950368523413,0.920650473014354,0.572895513439397,0.171853182343688,1.37016503954128,0.755393897389701,0,1.35096360967266,0,0.51776031175182,0.518936737920883,0.798049746802062,0.682934423016537,0.243106717068294,0.419226325255965,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0,0.37456602987953,0.448176066834085,0.459483751644906,0.952587382566147,0.231768651889711,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.177475806159338,0.476872379894642,0.290692833264657,0.188218760830661,0.507687647350059,0,0.263069711437843,0.271608227691724,0,0.593175090620871,0.197008964751127,0,0.929621047115796,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.382576664137687,0.441182838239031,0.927471342481686 | ||
|short_description=p@chr6:112996157..112996171,- | |||
}} | }} |
Latest revision as of 21:45, 4 August 2015
Short description: | p@chr6:112996157..112996171, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:112996157..112996171, - |
Coexpression cluster: | MCL_coexpression_mm9:255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.02e-09 | 46 |
mesenchymal cell | 3.02e-09 | 46 |
mature alpha-beta T cell | 1.03e-08 | 9 |
alpha-beta T cell | 1.03e-08 | 9 |
immature T cell | 1.03e-08 | 9 |
mature T cell | 1.03e-08 | 9 |
immature alpha-beta T cell | 1.03e-08 | 9 |
somatic stem cell | 1.34e-08 | 91 |
multi fate stem cell | 1.34e-08 | 91 |
hematopoietic cell | 7.58e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.58e-08 | 32 |
hematopoietic stem cell | 7.58e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.58e-08 | 32 |
motile cell | 1.04e-07 | 54 |
CD4-positive, alpha-beta T cell | 1.43e-07 | 8 |
stem cell | 1.84e-07 | 97 |
lymphoid lineage restricted progenitor cell | 1.92e-07 | 12 |
hematopoietic lineage restricted progenitor cell | 3.33e-07 | 25 |
leukocyte | 8.10e-07 | 17 |
nongranular leukocyte | 8.10e-07 | 17 |
T cell | 9.02e-07 | 11 |
pro-T cell | 9.02e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.02e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 4.70e-09 | 6 |