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FFCP PHASE1:Mm9::chr15:100058289..100058300,+: Difference between revisions

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{{FFCP|EntrezGene=11908|HGNC=|UniProt=P81269,Q9CWS2|association_with_transcript=0bp_to_NM_007497,uc007xqs.1_5end|description=CAGE_peak_3_at_Atf1_5end|id=chr15:100058289..100058300,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,5.85e-07,32;CL:0002032,5.85e-07,32;CL:0000037,5.85e-07,32;CL:0000837,5.85e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!1.17e-12!193;UBERON:0004120!1.17e-12!193;UBERON:0006603!1.17e-12!193;UBERON:0003081!4.22e-10!88;UBERON:0002390!1.95e-09!45;UBERON:0003061!1.95e-09!45;UBERON:0004177!3.35e-09!29;UBERON:0002193!2.25e-08!48;UBERON:0002405!2.28e-08!70;UBERON:0005057!3.24e-08!51;UBERON:0000072!3.57e-08!27;UBERON:0002370!4.39e-08!23;UBERON:0000974!4.39e-08!23;UBERON:0004807!4.39e-08!23;UBERON:0005058!4.39e-08!23;UBERON:0003351!4.39e-08!23;UBERON:0009113!4.39e-08!23;UBERON:0003295!4.39e-08!23;UBERON:0009722!4.39e-08!23;UBERON:0005562!4.39e-08!23;UBERON:0007690!4.39e-08!23;UBERON:0006562!1.06e-07!24;UBERON:0001557!1.06e-07!24;UBERON:0001042!1.06e-07!24;UBERON:0008814!1.06e-07!24;UBERON:0009145!1.06e-07!24;UBERON:0003104!1.30e-07!131;UBERON:0009142!1.30e-07!131;UBERON:0003408!4.95e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.59e-13,120;UBERON:0004120,1.59e-13,120;UBERON:0006603,1.59e-13,120;UBERON:0003081,1.06e-09,87;UBERON:0002390,2.06e-09,45;UBERON:0003061,2.06e-09,45;UBERON:0004177,2.53e-09,29;UBERON:0005057,2.53e-09,29;UBERON:0000077,1.09e-08,35;UBERON:0002193,2.12e-08,48;UBERON:0002405,2.12e-08,48;UBERON:0000072,2.80e-08,27;UBERON:0002370,3.45e-08,23;UBERON:0000974,3.45e-08,23;UBERON:0004807,3.45e-08,23;UBERON:0005058,3.45e-08,23;UBERON:0003351,3.45e-08,23;UBERON:0009113,3.45e-08,23;UBERON:0003295,3.45e-08,23;UBERON:0009722,3.45e-08,23;UBERON:0005562,3.45e-08,23;UBERON:0007690,3.45e-08,23;UBERON:0006562,8.45e-08,24;UBERON:0001557,8.45e-08,24;UBERON:0001042,8.45e-08,24;UBERON:0008814,8.45e-08,24;UBERON:0009145,8.45e-08,24;UBERON:0003408,2.69e-07,24|phase1_expression=1.60148847104794,1.39590163055744,0.454999239389536,0.30246421130683,0,2.51818907867835,0.934450562382103,1.93684985162364,6.05391505252167,6.08567768437183,4.28044920563762,3.19088635981346,1.88320802924326,1.83582845079895,2.99798785634096,2.42970320867791,4.19737126876888,1.89277299214943,2.60517423850904,2.54633791078818,1.27564935226605,1.58865521921416,1.56719873483361,0.47997726838022,1.37645568640302,0.57423196411502,0.430761996159075,0.430942465371778,0.760093677825496,1.76421090831952,1.55211357458713,1.90509202037889,2.46025915033828,0,1.1554064790051,2.1610503896604,1.42918549383658,3.34825304589526,1.5626706890476,3.14114246384279,2.94115744015507,2.73218193983378,1.94204141212461,4.02869817521847,3.24406179902447,2.38610777810186,0,0.872100625521786,1.09843091367236,0,0.55994568650145,0,2.34895648480831,5.80289713609076,2.68875039313971,2.57259436035947,2.0057340795713,3.09403255366465,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,1.24427534770173,0.270011876663381,0.210324961351382,0.285650984403804,1.10434270475807,0.367472397644862,0.383381884072945,0,1.10115880999389,0.893811366596314,0.614426133024974,0.395658863190582,0.457438218012048,0,0.837548997004143,2.8138130501584,0.61119299110724,0.589257170947335,0.569486723196412,0.745597783301202,1.51452386666368,1.43585964202892,1.44932244350839,0.860423876981386,2.03991400112325,2.15881276655127,1.29955283489534,2.24013443548668,1.12355536105401,2.72688516124892,1.81850203222008,0.70667914902068,0.563373679106722,1.28326477414318,2.54805239706646,7.11066703153331,2.81438353314578,2.02687892380079,2.02209778005913,1.02765491747154,1.55362730188303,2.22663208597237,1.73485326766136,2.13125834818499,2.07553947530453,2.41156224884196,2.11659672844269,0.753999547978053,1.73036477414062,1.3013942122792,6.19227386364912,2.26473589926373,2.65009822152472,1.45462575940567,0,1.17112318804619,1.25668024088073,2.04365644166873,2.51611761462433,4.79922184794726,3.81210681219194,1.19832511523858,0.915001205637253,0.628271760564322,0.869121600961382,1.02286182932132,0.20778804455956,0.648965052271031,2.34230536855727,2.36373244159177,2.27450482590307,1.26265113531884,1.17108398666433,0.919608417733892,0.900310649026746,1.05493372485001,1.90502197623718,1.15302348256365,0.749613796477831,0.258703370739016,1.5089759505299,2.26927296201383,0.879755620819744,0.657587197282725,0.834141747676794,2.78601733217733,0.61734640922383,2.38841120182192,3.51106593656617,3.60287069960601,3.12579849335152,2.27838349789052,0.938104239924385,1.08037236876609,0.946978942340841,2.95146347621106,1.85120535464854,2.09280550275367,0.804820204198858,2.33530684734339,2.63295759861569,2.13417703302824,1.78351381000883,1.46199987425332,1.97595103761946,1.20785776884335,0.630869845692382,0.514523061896422,0.330418782983798,2.90895623329899,2.13288250535234,1.85789337488351,2.57734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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11908
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P81269,uniprot:Q9CWS2
|association_with_transcript=0bp_to_NM_007497,uc007xqs.1_5end
|cluster_id=chr15:100058289..100058300,+
|description=CAGE_peak_3_at_Atf1_5end
|id=chr15:100058289..100058300,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,5.85e-07,32;CL:0002032,5.85e-07,32;CL:0000037,5.85e-07,32;CL:0000837,5.85e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.17e-12!193;UBERON:0004120!1.17e-12!193;UBERON:0006603!1.17e-12!193;UBERON:0003081!4.22e-10!88;UBERON:0002390!1.95e-09!45;UBERON:0003061!1.95e-09!45;UBERON:0004177!3.35e-09!29;UBERON:0002193!2.25e-08!48;UBERON:0002405!2.28e-08!70;UBERON:0005057!3.24e-08!51;UBERON:0000072!3.57e-08!27;UBERON:0002370!4.39e-08!23;UBERON:0000974!4.39e-08!23;UBERON:0004807!4.39e-08!23;UBERON:0005058!4.39e-08!23;UBERON:0003351!4.39e-08!23;UBERON:0009113!4.39e-08!23;UBERON:0003295!4.39e-08!23;UBERON:0009722!4.39e-08!23;UBERON:0005562!4.39e-08!23;UBERON:0007690!4.39e-08!23;UBERON:0006562!1.06e-07!24;UBERON:0001557!1.06e-07!24;UBERON:0001042!1.06e-07!24;UBERON:0008814!1.06e-07!24;UBERON:0009145!1.06e-07!24;UBERON:0003104!1.30e-07!131;UBERON:0009142!1.30e-07!131;UBERON:0003408!4.95e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.59e-13,120;UBERON:0004120,1.59e-13,120;UBERON:0006603,1.59e-13,120;UBERON:0003081,1.06e-09,87;UBERON:0002390,2.06e-09,45;UBERON:0003061,2.06e-09,45;UBERON:0004177,2.53e-09,29;UBERON:0005057,2.53e-09,29;UBERON:0000077,1.09e-08,35;UBERON:0002193,2.12e-08,48;UBERON:0002405,2.12e-08,48;UBERON:0000072,2.80e-08,27;UBERON:0002370,3.45e-08,23;UBERON:0000974,3.45e-08,23;UBERON:0004807,3.45e-08,23;UBERON:0005058,3.45e-08,23;UBERON:0003351,3.45e-08,23;UBERON:0009113,3.45e-08,23;UBERON:0003295,3.45e-08,23;UBERON:0009722,3.45e-08,23;UBERON:0005562,3.45e-08,23;UBERON:0007690,3.45e-08,23;UBERON:0006562,8.45e-08,24;UBERON:0001557,8.45e-08,24;UBERON:0001042,8.45e-08,24;UBERON:0008814,8.45e-08,24;UBERON:0009145,8.45e-08,24;UBERON:0003408,2.69e-07,24
|phase1_expression=1.60148847104794,1.39590163055744,0.454999239389536,0.30246421130683,0,2.51818907867835,0.934450562382103,1.93684985162364,6.05391505252167,6.08567768437183,4.28044920563762,3.19088635981346,1.88320802924326,1.83582845079895,2.99798785634096,2.42970320867791,4.19737126876888,1.89277299214943,2.60517423850904,2.54633791078818,1.27564935226605,1.58865521921416,1.56719873483361,0.47997726838022,1.37645568640302,0.57423196411502,0.430761996159075,0.430942465371778,0.760093677825496,1.76421090831952,1.55211357458713,1.90509202037889,2.46025915033828,0,1.1554064790051,2.1610503896604,1.42918549383658,3.34825304589526,1.5626706890476,3.14114246384279,2.94115744015507,2.73218193983378,1.94204141212461,4.02869817521847,3.24406179902447,2.38610777810186,0,0.872100625521786,1.09843091367236,0,0.55994568650145,0,2.34895648480831,5.80289713609076,2.68875039313971,2.57259436035947,2.0057340795713,3.09403255366465,0.202316460859598,0.528990979272033,0,0.338844532069132,0.889294796111139,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,1.24427534770173,0.270011876663381,0.210324961351382,0.285650984403804,1.10434270475807,0.367472397644862,0.383381884072945,0,1.10115880999389,0.893811366596314,0.614426133024974,0.395658863190582,0.457438218012048,0,0.837548997004143,2.8138130501584,0.61119299110724,0.589257170947335,0.569486723196412,0.745597783301202,1.51452386666368,1.43585964202892,1.44932244350839,0.860423876981386,2.03991400112325,2.15881276655127,1.29955283489534,2.24013443548668,1.12355536105401,2.72688516124892,1.81850203222008,0.70667914902068,0.563373679106722,1.28326477414318,2.54805239706646,7.11066703153331,2.81438353314578,2.02687892380079,2.02209778005913,1.02765491747154,1.55362730188303,2.22663208597237,1.73485326766136,2.13125834818499,2.07553947530453,2.41156224884196,2.11659672844269,0.753999547978053,1.73036477414062,1.3013942122792,6.19227386364912,2.26473589926373,2.65009822152472,1.45462575940567,0,1.17112318804619,1.25668024088073,2.04365644166873,2.51611761462433,4.79922184794726,3.81210681219194,1.19832511523858,0.915001205637253,0.628271760564322,0.869121600961382,1.02286182932132,0.20778804455956,0.648965052271031,2.34230536855727,2.36373244159177,2.27450482590307,1.26265113531884,1.17108398666433,0.919608417733892,0.900310649026746,1.05493372485001,1.90502197623718,1.15302348256365,0.749613796477831,0.258703370739016,1.5089759505299,2.26927296201383,0.879755620819744,0.657587197282725,0.834141747676794,2.78601733217733,0.61734640922383,2.38841120182192,3.51106593656617,3.60287069960601,3.12579849335152,2.27838349789052,0.938104239924385,1.08037236876609,0.946978942340841,2.95146347621106,1.85120535464854,2.09280550275367,0.804820204198858,2.33530684734339,2.63295759861569,2.13417703302824,1.78351381000883,1.46199987425332,1.97595103761946,1.20785776884335,0.630869845692382,0.514523061896422,0.330418782983798,2.90895623329899,2.13288250535234,1.85789337488351,2.57734922644187,1.61346819698674,1.77902435075896,1.90225626112559,0.949058123089023,2.47048432086016,1.00534083520108,1.1937388322469,1.75467678407208,1.79763881730844,0.864552199498777,1.1948476395262,1.70701110857774,3.31320686568214,0,2.44381593414377,1.35766741017338,1.82353131714828,1.89709611372772,1.18088118383682,0.784993639206874,0.616985819609003,0.889357881261447,4.83850806576673,2.75182593158484,3.14806957338795,3.65148218499305,2.65294875727659,1.52775511068852,2.01387296215567,2.43202840162553,2.74561413188081,4.31304619582064,0.744281895337007,0.936113019343682,0.505157755894224,1.07638448113147,0.964887042726734,0.923765950833023,2.4633883530163,1.30371981153621,2.71592137240301,1.40814148973101,1.50755631697634,0.952174563544055,1.36593553500459,2.20689201748667,1.10732344824387,1.43509291791738,1.3109065177259,1.03610989119537,1.88043776155965,1.50791283939272,2.71952841909355,0.491764273019036,1.65562047782839,1.12385412991454,0.586058432961016,2.95082901678016,3.53459298086122,1.89304931649754,3.12350995437311,1.07711698866399,1.43381278771531,3.11918143715352,1.41538265394416,1.61924280669958,2.92255857911312,0.395287777946524,0.321321316421807,1.41940085208269,1.24645922567079,1.95464351224291,1.81467135269789,0,2.6705869977048,2.41858845571801,2.07465587731488,1.18120757152309,1.22974059177571,1.55056975900933,1.45413491791002,1.78248689192361,1.26414703174326,1.05418608574999,0,1.02131881726136,1.62054984628179,0.517434735131018,0.857348140126369,1.24138163549592,1.07021290561242,0.493647061806363,1.2178597964584,1.87737366450968,1.90648863777438,1.7642271844397,1.15420377059036,2.26050197374268,2.17126529741361,1.07435109602823,1.47726809770555,1.7488850197791,0.556275906031529,2.73393409276564,1.65109494370578,1.85194527369712,2.63715839806567,2.87057878214153,2.51655990527175,4.41943917984024,3.35883485576779,2.48759952847963,0.954670618015114,2.21435195506795,1.82987520414164,1.40406943068342,2.92723614420256,1.09181281873089,1.34864346384821,1.98368293740806,2.35580347785627,0.648074866458964,0,4.50954350947352,2.24274819065968,2.15096037594227,1.94451188344048,1.16243841129958,2.36538575687089,1.99507305697782,2.8644964665669,3.56521771047417,2.41584120826006,2.01621004380506,2.8441000856536,2.43270258348197,2.77319584345034,2.5984164595559,3.93858730468459,3.3775830312815,2.04332264183947,3.69223817936443,2.92802704849628,3.35309949281999,2.92395936896837,2.14407337627455,1.82802499116626,1.75315353272353,1.36038230169127,1.55390167361845,1.25599399253266,1.00730769818447,2.70465431645067,3.19060208267009,2.38097111547445,1.07184189539533,0.501572104035363,0.564751842617067,1.38097570952153,1.14579102687879,0.859265911718438,0.685082519770642,0,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,2.17953429926771,1.59609949360412,2.21953687480374,2.43106717068294,2.72497111416377,2.94149613520023,1.33348036680969,1.44224540067226,1.28367683836726,1.51618327058278,1.2673964994512,2.07488975524684,1.03005658216871,1.02440243847791,1.43588672389033,1.42888107384922,0.927074607558844,1.92909220463705,1.23625770240992,1.61918812147837,2.74295401908332,1.06485483695602,0.715308569841963,1.59881058295561,1.41164070622996,1.86152137361688,2.0122077016005,1.05227884575137,2.03706170768793,1.12228454331548,1.54225523561426,1.0835493061312,2.04615521584845,2.32405261778949,1.92906610981141,1.24905288968973,1.40358965067245,2.57845264857958,2.29545998482612,1.10295709559758,3.47801753430632
|short_description=p3@Atf1
}}

Revision as of 22:27, 4 August 2015

Short description:p3@Atf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Atf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_007497, uc007xqs.1_5end
EntrezGene:11908
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Atf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D91.51
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.52
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.60
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.78
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.87
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.98
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F82.04
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.35
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G71.83
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.86
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B43.48





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mesoderm1.59e-13120
mesoderm-derived structure1.59e-13120
presumptive mesoderm1.59e-13120
lateral plate mesoderm1.06e-0987
hematopoietic system2.06e-0945
blood island2.06e-0945
hemopoietic organ2.53e-0929
immune organ2.53e-0929
mixed endoderm/mesoderm-derived structure1.09e-0835
hemolymphoid system2.12e-0848
immune system2.12e-0848
segment of respiratory tract2.80e-0827
thymus3.45e-0823
neck3.45e-0823
respiratory system epithelium3.45e-0823
hemolymphoid system gland3.45e-0823
pharyngeal epithelium3.45e-0823
thymic region3.45e-0823
pharyngeal gland3.45e-0823
entire pharyngeal arch endoderm3.45e-0823
thymus primordium3.45e-0823
early pharyngeal endoderm3.45e-0823
pharynx8.45e-0824
upper respiratory tract8.45e-0824
chordate pharynx8.45e-0824
pharyngeal arch system8.45e-0824
pharyngeal region of foregut8.45e-0824
gland of gut2.69e-0724
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