FFCP PHASE1:Mm9::chr10:85808596..85808612,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:85808596..85808612,+|id=chr10:85808596..85808612,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.74e-12,7;CL:0000680,1.21e-10,6;CL:0000187,1.21e-10,6;CL:0000056,1.21e-10,6;CL:0000192,9.62e-09,3;CL:0000359,9.62e-09,3;CL:0002539,9.62e-09,3;CL:0000514,9.62e-09,3;CL:0000128,4.51e-07,6;CL:0000126,4.51e-07,6;CL:0000127,4.51e-07,6;CL:0000355,5.90e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.13e-12,5;UBERON:0007500,3.13e-12,5;UBERON:0001981,3.13e-12,5;UBERON:0002049,3.13e-12,5;UBERON:0007798,3.13e-12,5;UBERON:0004537,3.13e-12,5;UBERON:0006965,3.13e-12,5;UBERON:0000947,2.14e-10,4;UBERON:0001637,2.14e-10,4;UBERON:0004573,2.14e-10,4;UBERON:0003509,2.14e-10,4;UBERON:0004571,2.14e-10,4;UBERON:0010191,2.14e-10,4;UBERON:0004572,2.14e-10,4;UBERON:0001135,9.62e-09,3;UBERON:0004237,9.62e-09,3;UBERON:0004695,9.62e-09,3;UBERON:0002111,9.62e-09,3;UBERON:0004178,9.62e-09,3;UBERON:0002100,4.92e-08,90;UBERON:0001134,5.90e-07,9;UBERON:0002036,5.90e-07,9;UBERON:0002385,5.90e-07,9;UBERON:0000486,5.90e-07,9;UBERON:0007503,5.90e-07,9;UBERON:0001015,5.90e-07,9;UBERON:0002329,5.90e-07,9;UBERON:0003082,5.90e-07,9;UBERON:0003059,5.90e-07,9;UBERON:0007282,5.90e-07,9;UBERON:0004290,5.90e-07,9;UBERON:0009618,5.90e-07,9|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6327290603854,17.335455238537,1.65192076945513,0.782391344348039,0.872100625521786,4.83309602015838,5.8328969722285,1.67983705950435,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,4.12537673821954,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,2.1314403448383,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0,0.589257170947335,0.569486723196412,0,1.36307147999731,0.151143120213571,1.15945795480671,0.860423876981386,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.79928715803342,1.03575153458869,1.33597925158342,0,1.21786191324856,0.230615497256059,0.753613202763113,1.88141931417128,0.125666591329675,2.71914464507811,1.01219549843938,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,1.25668024088073,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0.916554274652847,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.408218994907967,0.640568601424249,0.281105173679186,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0.198956472041151,0,1.79763881730844,0.216138049874694,0.199141273254367,0,0,1.1270773567308,0.407302655690628,0.775809948670503,0.841629838683823,0.822074982615345,1.77132177575523,1.56998727841375,1.60416313098341,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,2.87536413054709,0,0,0,0,0,3.14080423283228,0,0.162964976442026,0.169745085775188,0,1.00503754465089,0.238043640886014,2.14647012643579,0.630540576424764,1.7717175171902,0.318909537314974,2.29408640602033,0.690739927463582,1.59113964439663,0,0,0,0.551873492609465,0.321101179975584,0,0.983609672260053,0.252470927204373,0.94652465824877,0.390438744296638,0.430846795465598,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.488660878060728,2.47455184458803,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.822745103010605,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.16488625294148,0.645857706783622,0.422190474497091,0.238744688006273,0.820704498725306,0.291480836629851,0.556275906031529,0,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0.674321731924103,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.506868376472335,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.25984164595559,0,0.596044064343795,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,1.15913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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:85808596..85808612,+ | |||
|description=CAGE_peak_at_chr10:85808596..85808612,+ | |||
|id=chr10:85808596..85808612,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.74e-12,7;CL:0000680,1.21e-10,6;CL:0000187,1.21e-10,6;CL:0000056,1.21e-10,6;CL:0000192,9.62e-09,3;CL:0000359,9.62e-09,3;CL:0002539,9.62e-09,3;CL:0000514,9.62e-09,3;CL:0000128,4.51e-07,6;CL:0000126,4.51e-07,6;CL:0000127,4.51e-07,6;CL:0000355,5.90e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.13e-12,5;UBERON:0007500,3.13e-12,5;UBERON:0001981,3.13e-12,5;UBERON:0002049,3.13e-12,5;UBERON:0007798,3.13e-12,5;UBERON:0004537,3.13e-12,5;UBERON:0006965,3.13e-12,5;UBERON:0000947,2.14e-10,4;UBERON:0001637,2.14e-10,4;UBERON:0004573,2.14e-10,4;UBERON:0003509,2.14e-10,4;UBERON:0004571,2.14e-10,4;UBERON:0010191,2.14e-10,4;UBERON:0004572,2.14e-10,4;UBERON:0001135,9.62e-09,3;UBERON:0004237,9.62e-09,3;UBERON:0004695,9.62e-09,3;UBERON:0002111,9.62e-09,3;UBERON:0004178,9.62e-09,3;UBERON:0002100,4.92e-08,90;UBERON:0001134,5.90e-07,9;UBERON:0002036,5.90e-07,9;UBERON:0002385,5.90e-07,9;UBERON:0000486,5.90e-07,9;UBERON:0007503,5.90e-07,9;UBERON:0001015,5.90e-07,9;UBERON:0002329,5.90e-07,9;UBERON:0003082,5.90e-07,9;UBERON:0003059,5.90e-07,9;UBERON:0007282,5.90e-07,9;UBERON:0004290,5.90e-07,9;UBERON:0009618,5.90e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.6327290603854,17.335455238537,1.65192076945513,0.782391344348039,0.872100625521786,4.83309602015838,5.8328969722285,1.67983705950435,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,4.12537673821954,0,0,0,0.338844532069132,0,0.899899717281399,0.988866362566974,2.1314403448383,0.599200221036809,0.768436610643109,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0.383062014255563,0.153606533256243,0,0,0.52091337055676,0.279182999001381,0,0,0.589257170947335,0.569486723196412,0,1.36307147999731,0.151143120213571,1.15945795480671,0.860423876981386,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.79928715803342,1.03575153458869,1.33597925158342,0,1.21786191324856,0.230615497256059,0.753613202763113,1.88141931417128,0.125666591329675,2.71914464507811,1.01219549843938,0.884610551949874,0.161766849947409,0.220841518460394,0.484875253135222,1.86391761218122,0,1.25668024088073,0.510914110417183,0,0,0,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0.916554274652847,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0.180062129805349,0,0.408218994907967,0.640568601424249,0.281105173679186,1.29351685369508,0,0.378212160335639,0.175951124163949,0,0.556094498451196,0.696504333044333,0,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0.219550115291051,0.402619256281115,0,0.205809224758569,0,0.264450566663544,0.213288250535234,0,0.128867461322093,0,0,0,0,0.494096864172033,0,0.198956472041151,0,1.79763881730844,0.216138049874694,0.199141273254367,0,0,1.1270773567308,0.407302655690628,0.775809948670503,0.841629838683823,0.822074982615345,1.77132177575523,1.56998727841375,1.60416313098341,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0.486405680325106,0,2.87536413054709,0,0,0,0,0,3.14080423283228,0,0.162964976442026,0.169745085775188,0,1.00503754465089,0.238043640886014,2.14647012643579,0.630540576424764,1.7717175171902,0.318909537314974,2.29408640602033,0.690739927463582,1.59113964439663,0,0,0,0.551873492609465,0.321101179975584,0,0.983609672260053,0.252470927204373,0.94652465824877,0.390438744296638,0.430846795465598,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,0.790575555893047,0.321321316421807,0.567760340833074,0.178065603667255,0.488660878060728,2.47455184458803,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,1.05418608574999,0,0.340439605753788,0,0.258717367565509,0.214337035031592,0,0.178368817602071,0.822745103010605,0.304464949114599,0.469343416127421,0.847328283455281,0.220528398054962,0.16488625294148,0.645857706783622,0.422190474497091,0.238744688006273,0.820704498725306,0.291480836629851,0.556275906031529,0,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0,0,0.108005340821801,0,0,0.674321731924103,0.41326727862668,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.506868376472335,0.234714477291508,0.39061315453185,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.25984164595559,0,0.596044064343795,0,0,0.100966449948148,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,1.15913756419314,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0,0.818462086339379,0,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,1.72159498861959,0.441182838239031,0.695603506861264 | |||
|short_description=p@chr10:85808596..85808612,+ | |||
}} |
Latest revision as of 23:06, 4 August 2015
Short description: | p@chr10:85808596..85808612, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:85808596..85808612, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.74e-12 | 7 |
muscle precursor cell | 1.21e-10 | 6 |
muscle cell | 1.21e-10 | 6 |
myoblast | 1.21e-10 | 6 |
smooth muscle cell | 9.62e-09 | 3 |
vascular associated smooth muscle cell | 9.62e-09 | 3 |
aortic smooth muscle cell | 9.62e-09 | 3 |
smooth muscle myoblast | 9.62e-09 | 3 |
oligodendrocyte | 4.51e-07 | 6 |
macroglial cell | 4.51e-07 | 6 |
astrocyte | 4.51e-07 | 6 |
multi-potent skeletal muscle stem cell | 5.90e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vessel | 3.13e-12 | 5 |
epithelial tube open at both ends | 3.13e-12 | 5 |
blood vessel | 3.13e-12 | 5 |
vasculature | 3.13e-12 | 5 |
vascular system | 3.13e-12 | 5 |
blood vasculature | 3.13e-12 | 5 |
vascular cord | 3.13e-12 | 5 |
aorta | 2.14e-10 | 4 |
artery | 2.14e-10 | 4 |
systemic artery | 2.14e-10 | 4 |
arterial blood vessel | 2.14e-10 | 4 |
systemic arterial system | 2.14e-10 | 4 |
aortic system | 2.14e-10 | 4 |
arterial system | 2.14e-10 | 4 |
smooth muscle tissue | 9.62e-09 | 3 |
blood vessel smooth muscle | 9.62e-09 | 3 |
arterial system smooth muscle | 9.62e-09 | 3 |
artery smooth muscle tissue | 9.62e-09 | 3 |
aorta smooth muscle tissue | 9.62e-09 | 3 |
trunk | 4.92e-08 | 90 |
skeletal muscle tissue | 5.90e-07 | 9 |
striated muscle tissue | 5.90e-07 | 9 |
muscle tissue | 5.90e-07 | 9 |
multilaminar epithelium | 5.90e-07 | 9 |
epithelial vesicle | 5.90e-07 | 9 |
musculature | 5.90e-07 | 9 |
somite | 5.90e-07 | 9 |
myotome | 5.90e-07 | 9 |
presomitic mesoderm | 5.90e-07 | 9 |
presumptive segmental plate | 5.90e-07 | 9 |
dermomyotome | 5.90e-07 | 9 |
trunk paraxial mesoderm | 5.90e-07 | 9 |