FFCP PHASE1:Mm9::chr7:50664622..50664632,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1406 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:50664622..50664632,+ | |||
|description=CAGE_peak_at_chr7:50664622..50664632,+ | |description=CAGE_peak_at_chr7:50664622..50664632,+ | ||
|id=chr7:50664622..50664632,+ | |id=chr7:50664622..50664632,+ | ||
|ontology_enrichment_celltype=CL:0000680!9.41e-20!6;CL:0000183!9.41e-20!6;CL:0000187!9.41e-20!6;CL:0000056!9.41e-20!6;CL:0000222!7.55e-17!7;CL:0000355!5.70e-13!9;CL:0000192!2.09e-11!3;CL:0000359!2.09e-11!3;CL:0002539!2.09e-11!3;CL:0000514!2.09e-11!3;CL:0002494!5.21e-10!3;CL:0000737!5.21e-10!3;CL:0000746!5.21e-10!3;CL:0000513!5.21e-10!3;CL:0000393!8.92e-07!39;CL:0000211!8.92e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.62e-30,3;CL:0000359,3.62e-30,3;CL:0002539,3.62e-30,3;CL:0000514,3.62e-30,3;CL:0000680,1.79e-15,6;CL:0000187,1.79e-15,6;CL:0000056,1.79e-15,6;CL:0000222,2.31e-13,7;CL:0000355,1.54e-10,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!5.70e-13!9;UBERON:0002036!5.70e-13!9;UBERON:0002385!5.70e-13!9;UBERON:0000486!5.70e-13!9;UBERON:0001015!5.70e-13!9;UBERON:0004290!5.70e-13!9;UBERON:0003082!5.70e-13!9;UBERON:0000383!1.30e-11!10;UBERON:0001135!2.09e-11!3;UBERON:0004237!2.09e-11!3;UBERON:0004695!2.09e-11!3;UBERON:0002111!2.09e-11!3;UBERON:0004178!2.09e-11!3;UBERON:0000013!1.50e-10!3;UBERON:0002329!1.69e-10!11;UBERON:0003077!1.69e-10!11;UBERON:0003059!1.69e-10!11;UBERON:0007282!1.69e-10!11;UBERON:0009618!1.69e-10!11;UBERON:0007285!1.69e-10!11;UBERON:0000947!1.19e-08!4;UBERON:0001637!1.19e-08!4;UBERON:0003509!1.19e-08!4;UBERON:0004573!1.19e-08!4;UBERON:0004571!1.19e-08!4;UBERON:0010191!1.19e-08!4;UBERON:0004572!1.19e-08!4;UBERON:0000055!5.48e-07!5;UBERON:0001981!5.48e-07!5;UBERON:0002049!5.48e-07!5;UBERON:0007500!5.48e-07!5;UBERON:0007798!5.48e-07!5;UBERON:0004537!5.48e-07!5;UBERON:0006965!5.48e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.62e-30,3;UBERON:0004237,3.62e-30,3;UBERON:0004695,3.62e-30,3;UBERON:0002111,3.62e-30,3;UBERON:0004178,3.62e-30,3;UBERON:0000947,7.83e-23,4;UBERON:0001637,7.83e-23,4;UBERON:0004573,7.83e-23,4;UBERON:0003509,7.83e-23,4;UBERON:0004571,7.83e-23,4;UBERON:0010191,7.83e-23,4;UBERON:0004572,7.83e-23,4;UBERON:0000055,2.02e-18,5;UBERON:0007500,2.02e-18,5;UBERON:0001981,2.02e-18,5;UBERON:0002049,2.02e-18,5;UBERON:0007798,2.02e-18,5;UBERON:0004537,2.02e-18,5;UBERON:0006965,2.02e-18,5;UBERON:0001134,1.54e-10,9;UBERON:0002036,1.54e-10,9;UBERON:0002385,1.54e-10,9;UBERON:0000486,1.54e-10,9;UBERON:0007503,1.54e-10,9;UBERON:0001015,1.54e-10,9;UBERON:0002329,1.54e-10,9;UBERON:0003082,1.54e-10,9;UBERON:0003059,1.54e-10,9;UBERON:0007282,1.54e-10,9;UBERON:0004290,1.54e-10,9;UBERON:0009618,1.54e-10,9;UBERON:0000383,1.51e-09,10;UBERON:0007524,9.84e-09,11;UBERON:0003077,9.84e-09,11;UBERON:0007285,9.84e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,6.24058957349717,1.56478268869608,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,1.36344258062446,2.07828803682295,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,6.24058957349717,1.56478268869608,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,1.36344258062446,2.07828803682295,1.41335829804136,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14754461763673,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:50664622..50664632,+ | |short_description=p@chr7:50664622..50664632,+ | ||
}} | }} |
Latest revision as of 05:23, 5 August 2015
Short description: | p@chr7:50664622..50664632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:50664622..50664632, + |
Coexpression cluster: | MCL_coexpression_mm9:1406 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.62e-30 | 3 |
vascular associated smooth muscle cell | 3.62e-30 | 3 |
aortic smooth muscle cell | 3.62e-30 | 3 |
smooth muscle myoblast | 3.62e-30 | 3 |
muscle precursor cell | 1.79e-15 | 6 |
muscle cell | 1.79e-15 | 6 |
myoblast | 1.79e-15 | 6 |
mesodermal cell | 2.31e-13 | 7 |
multi-potent skeletal muscle stem cell | 1.54e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.62e-30 | 3 |
blood vessel smooth muscle | 3.62e-30 | 3 |
arterial system smooth muscle | 3.62e-30 | 3 |
artery smooth muscle tissue | 3.62e-30 | 3 |
aorta smooth muscle tissue | 3.62e-30 | 3 |
aorta | 7.83e-23 | 4 |
artery | 7.83e-23 | 4 |
systemic artery | 7.83e-23 | 4 |
arterial blood vessel | 7.83e-23 | 4 |
systemic arterial system | 7.83e-23 | 4 |
aortic system | 7.83e-23 | 4 |
arterial system | 7.83e-23 | 4 |
vessel | 2.02e-18 | 5 |
epithelial tube open at both ends | 2.02e-18 | 5 |
blood vessel | 2.02e-18 | 5 |
vasculature | 2.02e-18 | 5 |
vascular system | 2.02e-18 | 5 |
blood vasculature | 2.02e-18 | 5 |
vascular cord | 2.02e-18 | 5 |
skeletal muscle tissue | 1.54e-10 | 9 |
striated muscle tissue | 1.54e-10 | 9 |
muscle tissue | 1.54e-10 | 9 |
multilaminar epithelium | 1.54e-10 | 9 |
epithelial vesicle | 1.54e-10 | 9 |
musculature | 1.54e-10 | 9 |
somite | 1.54e-10 | 9 |
myotome | 1.54e-10 | 9 |
presomitic mesoderm | 1.54e-10 | 9 |
presumptive segmental plate | 1.54e-10 | 9 |
dermomyotome | 1.54e-10 | 9 |
trunk paraxial mesoderm | 1.54e-10 | 9 |
musculature of body | 1.51e-09 | 10 |
dense mesenchyme tissue | 9.84e-09 | 11 |
paraxial mesoderm | 9.84e-09 | 11 |
presumptive paraxial mesoderm | 9.84e-09 | 11 |