FFCP PHASE1:Mm9::chr12:77356440..77356459,+: Difference between revisions
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{{FFCP|EntrezGene=108156|HGNC=|MCL_coexpression_id=179|UniProt=Q8BXX7|association_with_transcript=56bp_to_ENSMUST00000172157_5end|description=CAGE_peak_4_at_Mthfd1_5end|id=chr12:77356440..77356459,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!1.59e-20!85;UBERON:0009569!3.90e-19!66;UBERON:0001041!1.87e-18!92;UBERON:0000466!1.35e-17!79;UBERON:0000077!9.43e-16!97;UBERON:0003104!4.33e-15!131;UBERON:0009142!4.33e-15!131;UBERON:0004921!5.77e-14!126;UBERON:0004185!5.77e-14!126;UBERON:0005172!1.05e-13!49;UBERON:0005173!1.05e-13!49;UBERON:0002417!1.05e-13!49;UBERON:0000916!1.05e-13!49;UBERON:0002100!1.54e-13!98;UBERON:0001007!2.21e-13!128;UBERON:0001555!2.21e-13!128;UBERON:0007026!2.21e-13!128;UBERON:0002107!2.94e-13!22;UBERON:0007499!2.94e-13!22;UBERON:0006925!2.94e-13!22;UBERON:0009497!2.94e-13!22;UBERON:0000015!2.94e-13!22;UBERON:0002423!2.94e-13!22;UBERON:0006235!2.94e-13!22;UBERON:0008835!2.94e-13!22;UBERON:0003894!2.94e-13!22;UBERON:0004161!2.94e-13!22;UBERON:0008836!2.94e-13!22;UBERON:0004119!9.24e-13!130;UBERON:0000925!9.24e-13!130;UBERON:0006595!9.24e-13!130;UBERON:0005911!3.58e-12!69;UBERON:0009854!9.35e-12!23;UBERON:0009856!9.35e-12!23;UBERON:0002365!4.00e-10!25;UBERON:0002330!4.00e-10!25;UBERON:0005057!8.14e-09!51;UBERON:0000926!3.41e-08!193;UBERON:0004120!3.41e-08!193;UBERON:0006603!3.41e-08!193;UBERON:0003929!3.61e-07!55;UBERON:0000464!4.40e-07!57;UBERON:0000949!4.68e-07!72;UBERON:0001048!6.92e-07!147;UBERON:0002048!8.48e-07!14;UBERON:0000117!8.48e-07!14;UBERON:0000171!8.48e-07!14;UBERON:0000170!8.48e-07!14;UBERON:0005597!8.48e-07!14;UBERON:0000118!8.48e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.45e-25,79;UBERON:0009569,6.99e-21,66;UBERON:0002100,9.78e-20,90;UBERON:0001041,1.35e-15,80;UBERON:0002107,6.70e-15,22;UBERON:0007499,6.70e-15,22;UBERON:0006925,6.70e-15,22;UBERON:0009497,6.70e-15,22;UBERON:0000015,6.70e-15,22;UBERON:0002423,6.70e-15,22;UBERON:0006235,6.70e-15,22;UBERON:0008835,6.70e-15,22;UBERON:0003894,6.70e-15,22;UBERON:0004161,6.70e-15,22;UBERON:0008836,6.70e-15,22;UBERON:0005172,1.15e-14,49;UBERON:0005173,1.15e-14,49;UBERON:0002417,1.15e-14,49;UBERON:0000916,1.15e-14,49;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0005911,2.05e-13,69;UBERON:0002365,1.18e-11,25;UBERON:0002330,1.18e-11,25;UBERON:0004921,3.10e-11,114;UBERON:0001007,1.48e-10,116;UBERON:0001555,1.48e-10,116;UBERON:0007026,1.48e-10,116;UBERON:0004119,6.51e-10,118;UBERON:0000925,6.51e-10,118;UBERON:0006595,6.51e-10,118;UBERON:0003104,2.62e-08,61;UBERON:0009142,2.62e-08,61;UBERON:0003929,9.24e-08,55;UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0000949,2.26e-07,72|phase1_expression=0.160148847104794,0,0,0.90739263392049,2.00358291978539,0.839396359559449,1.16806320297763,0.645616617207881,3.37892933164,3.04283884218592,1.88339765048055,3.11111420081812,0.513602189793617,0.961624426608971,2.99798785634096,4.04950534779652,5.59649502502517,0.473193248037357,0.137114433605739,0.42438965179803,5.3577272795174,1.29078236561151,1.30599894569468,0.95995453676044,0.22940928106717,0.57423196411502,0,0.430942465371778,1.14014051673824,2.52030129759931,1.33038306393183,1.27006134691926,1.23012957516914,0,2.3108129580102,2.1610503896604,3.26670970019791,0.418531630736908,0,0,0,0,0,1.38486499773135,1.92616169317078,0.550640256485045,0,2.39827672018491,1.75748946187577,1.74986909166855,2.37976916763116,2.87505128729943,0.167782606057736,0,1.00828139742739,0.514518872071894,0,0,0.606949382578793,0,0.633831403506179,0.677689064138264,0,0,0,0,0.599200221036809,0.768436610643109,0.207379224616955,1.62007125998029,0.841299845405528,1.42825492201902,1.54607978666129,0.244981598429908,0.575072826109418,0.919218786610021,1.10115880999389,1.27687338085188,1.0752457327937,0.395658863190582,0.365950574409639,0.52091337055676,1.3959149950069,0.56276261003168,1.68078072554491,0.294628585473668,0.854230084794618,0.559198337475902,0.227178579999552,0.302286240427142,2.89864488701678,3.44169550792555,4.0798280022465,12.4131734076698,10.3964226791627,16.1289679355041,6.88177658645584,0.681721290312231,1.29893002301434,0.70667914902068,0.563373679106722,0,0,0,1.5154372870785,1.26679932737549,0.505524445014783,10.7332846935916,0.258937883647172,0.593768556259299,1.21439728736295,0,0.691846491768175,0.904335843315735,1.05829836422134,0.628332956648377,0.494389935468748,0.433798070759735,1.76922110389975,0.323533699894818,2.20841518460394,1.45462575940567,0,1.75668478206928,0.628340120440365,0.766371165625774,1.07833612055328,0.599902730993408,1.01656181658452,1.3481157546434,0.915001205637253,2.76439574648302,0.695297280769106,0.767146371990992,1.66230435647648,1.46017136760982,1.01839363850316,1.7416975885413,1.51633655060205,0.420883711772948,2.08192708740326,0.459804208866946,0.54018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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108156 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BXX7 | |||
|association_with_transcript=56bp_to_ENSMUST00000172157_5end | |||
|cluster_id=chr12:77356440..77356459,+ | |||
|description=CAGE_peak_4_at_Mthfd1_5end | |||
|id=chr12:77356440..77356459,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!1.59e-20!85;UBERON:0009569!3.90e-19!66;UBERON:0001041!1.87e-18!92;UBERON:0000466!1.35e-17!79;UBERON:0000077!9.43e-16!97;UBERON:0003104!4.33e-15!131;UBERON:0009142!4.33e-15!131;UBERON:0004921!5.77e-14!126;UBERON:0004185!5.77e-14!126;UBERON:0005172!1.05e-13!49;UBERON:0005173!1.05e-13!49;UBERON:0002417!1.05e-13!49;UBERON:0000916!1.05e-13!49;UBERON:0002100!1.54e-13!98;UBERON:0001007!2.21e-13!128;UBERON:0001555!2.21e-13!128;UBERON:0007026!2.21e-13!128;UBERON:0002107!2.94e-13!22;UBERON:0007499!2.94e-13!22;UBERON:0006925!2.94e-13!22;UBERON:0009497!2.94e-13!22;UBERON:0000015!2.94e-13!22;UBERON:0002423!2.94e-13!22;UBERON:0006235!2.94e-13!22;UBERON:0008835!2.94e-13!22;UBERON:0003894!2.94e-13!22;UBERON:0004161!2.94e-13!22;UBERON:0008836!2.94e-13!22;UBERON:0004119!9.24e-13!130;UBERON:0000925!9.24e-13!130;UBERON:0006595!9.24e-13!130;UBERON:0005911!3.58e-12!69;UBERON:0009854!9.35e-12!23;UBERON:0009856!9.35e-12!23;UBERON:0002365!4.00e-10!25;UBERON:0002330!4.00e-10!25;UBERON:0005057!8.14e-09!51;UBERON:0000926!3.41e-08!193;UBERON:0004120!3.41e-08!193;UBERON:0006603!3.41e-08!193;UBERON:0003929!3.61e-07!55;UBERON:0000464!4.40e-07!57;UBERON:0000949!4.68e-07!72;UBERON:0001048!6.92e-07!147;UBERON:0002048!8.48e-07!14;UBERON:0000117!8.48e-07!14;UBERON:0000171!8.48e-07!14;UBERON:0000170!8.48e-07!14;UBERON:0005597!8.48e-07!14;UBERON:0000118!8.48e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.45e-25,79;UBERON:0009569,6.99e-21,66;UBERON:0002100,9.78e-20,90;UBERON:0001041,1.35e-15,80;UBERON:0002107,6.70e-15,22;UBERON:0007499,6.70e-15,22;UBERON:0006925,6.70e-15,22;UBERON:0009497,6.70e-15,22;UBERON:0000015,6.70e-15,22;UBERON:0002423,6.70e-15,22;UBERON:0006235,6.70e-15,22;UBERON:0008835,6.70e-15,22;UBERON:0003894,6.70e-15,22;UBERON:0004161,6.70e-15,22;UBERON:0008836,6.70e-15,22;UBERON:0005172,1.15e-14,49;UBERON:0005173,1.15e-14,49;UBERON:0002417,1.15e-14,49;UBERON:0000916,1.15e-14,49;UBERON:0009854,1.03e-13,23;UBERON:0009856,1.03e-13,23;UBERON:0005911,2.05e-13,69;UBERON:0002365,1.18e-11,25;UBERON:0002330,1.18e-11,25;UBERON:0004921,3.10e-11,114;UBERON:0001007,1.48e-10,116;UBERON:0001555,1.48e-10,116;UBERON:0007026,1.48e-10,116;UBERON:0004119,6.51e-10,118;UBERON:0000925,6.51e-10,118;UBERON:0006595,6.51e-10,118;UBERON:0003104,2.62e-08,61;UBERON:0009142,2.62e-08,61;UBERON:0003929,9.24e-08,55;UBERON:0002048,1.54e-07,14;UBERON:0000117,1.54e-07,14;UBERON:0000171,1.54e-07,14;UBERON:0000170,1.54e-07,14;UBERON:0005597,1.54e-07,14;UBERON:0000118,1.54e-07,14;UBERON:0000949,2.26e-07,72 | |||
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| |||
|short_description=p4@Mthfd1 | |||
}} |
Revision as of 06:10, 5 August 2015
Short description: | p4@Mthfd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mthfd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 56bp_to_ENSMUST00000172157_5end |
EntrezGene: | 108156 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data