FFCP PHASE1:Mm9::chr4:154310712..154310719,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=178 | |MCL_coexpression_id=178 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:154310712..154310719,- | |||
|description=CAGE_peak_at_chr4:154310712..154310719,- | |description=CAGE_peak_at_chr4:154310712..154310719,- | ||
|id=chr4:154310712..154310719,- | |id=chr4:154310712..154310719,- | ||
|ontology_enrichment_celltype=CL:0000791!2.18e-59!9;CL:0000789!2.18e-59!9;CL:0002420!2.18e-59!9;CL:0002419!2.18e-59!9;CL:0000790!2.18e-59!9;CL:0000624!2.16e-49!8;CL:0000084!1.18e-48!11;CL:0000827!1.18e-48!11;CL:0000838!1.26e-44!12;CL:0000542!3.24e-41!13;CL:0000051!3.24e-41!13;CL:0000738!1.40e-31!17;CL:0002087!1.40e-31!17;CL:0000893!1.71e-29!6;CL:0002489!1.71e-29!6;CL:0000898!1.71e-29!6;CL:0000809!1.71e-29!6;CL:0000810!1.71e-29!6;CL:0000895!1.71e-29!6;CL:0000808!1.71e-29!6;CL:0000894!1.71e-29!6;CL:0000806!1.71e-29!6;CL:0000807!1.71e-29!6;CL:0000805!1.71e-29!6;CL:0002425!1.71e-29!6;CL:0002436!1.71e-29!6;CL:0002427!1.71e-29!6;CL:0002428!1.71e-29!6;CL:0002429!1.71e-29!6;CL:0002433!1.71e-29!6;CL:0002431!1.71e-29!6;CL:0002432!1.71e-29!6;CL:0002031!1.57e-21!25;CL:0000988!7.62e-17!32;CL:0002032!7.62e-17!32;CL:0000037!7.62e-17!32;CL:0000566!7.62e-17!32;CL:0000837!7.62e-17!32;CL:0000815!1.20e-12!1;CL:0000792!1.20e-12!1;CL:0000625!4.30e-12!1;CL:0002320!1.00e-11!46;CL:0000134!1.00e-11!46;CL:0000219!5.55e-10!54;CL:0000063!3.76e-08!66 | |ontology_enrichment_celltype=CL:0000791!2.18e-59!9;CL:0000789!2.18e-59!9;CL:0002420!2.18e-59!9;CL:0002419!2.18e-59!9;CL:0000790!2.18e-59!9;CL:0000624!2.16e-49!8;CL:0000084!1.18e-48!11;CL:0000827!1.18e-48!11;CL:0000838!1.26e-44!12;CL:0000542!3.24e-41!13;CL:0000051!3.24e-41!13;CL:0000738!1.40e-31!17;CL:0002087!1.40e-31!17;CL:0000893!1.71e-29!6;CL:0002489!1.71e-29!6;CL:0000898!1.71e-29!6;CL:0000809!1.71e-29!6;CL:0000810!1.71e-29!6;CL:0000895!1.71e-29!6;CL:0000808!1.71e-29!6;CL:0000894!1.71e-29!6;CL:0000806!1.71e-29!6;CL:0000807!1.71e-29!6;CL:0000805!1.71e-29!6;CL:0002425!1.71e-29!6;CL:0002436!1.71e-29!6;CL:0002427!1.71e-29!6;CL:0002428!1.71e-29!6;CL:0002429!1.71e-29!6;CL:0002433!1.71e-29!6;CL:0002431!1.71e-29!6;CL:0002432!1.71e-29!6;CL:0002031!1.57e-21!25;CL:0000988!7.62e-17!32;CL:0002032!7.62e-17!32;CL:0000037!7.62e-17!32;CL:0000566!7.62e-17!32;CL:0000837!7.62e-17!32;CL:0000815!1.20e-12!1;CL:0000792!1.20e-12!1;CL:0000625!4.30e-12!1;CL:0002320!1.00e-11!46;CL:0000134!1.00e-11!46;CL:0000219!5.55e-10!54;CL:0000063!3.76e-08!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.67e-12!23;UBERON:0000974!4.67e-12!23;UBERON:0004807!4.67e-12!23;UBERON:0005058!4.67e-12!23;UBERON:0003351!4.67e-12!23;UBERON:0009113!4.67e-12!23;UBERON:0003295!4.67e-12!23;UBERON:0009722!4.67e-12!23;UBERON:0005562!4.67e-12!23;UBERON:0007690!4.67e-12!23;UBERON:0002384!1.00e-11!46;UBERON:0006562!1.45e-11!24;UBERON:0003408!1.45e-11!24;UBERON:0001557!1.45e-11!24;UBERON:0001042!1.45e-11!24;UBERON:0008814!1.45e-11!24;UBERON:0009145!1.45e-11!24;UBERON:0000072!2.64e-10!27;UBERON:0004177!1.31e-09!29;UBERON:0000063!5.46e-08!35;UBERON:0000065!7.71e-07!41 | |ontology_enrichment_uberon=UBERON:0002370!4.67e-12!23;UBERON:0000974!4.67e-12!23;UBERON:0004807!4.67e-12!23;UBERON:0005058!4.67e-12!23;UBERON:0003351!4.67e-12!23;UBERON:0009113!4.67e-12!23;UBERON:0003295!4.67e-12!23;UBERON:0009722!4.67e-12!23;UBERON:0005562!4.67e-12!23;UBERON:0007690!4.67e-12!23;UBERON:0002384!1.00e-11!46;UBERON:0006562!1.45e-11!24;UBERON:0003408!1.45e-11!24;UBERON:0001557!1.45e-11!24;UBERON:0001042!1.45e-11!24;UBERON:0008814!1.45e-11!24;UBERON:0009145!1.45e-11!24;UBERON:0000072!2.64e-10!27;UBERON:0004177!1.31e-09!29;UBERON:0000063!5.46e-08!35;UBERON:0000065!7.71e-07!41 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0.398860794976682,0.856003649656029,3.58423649917889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0.398860794976682,0.856003649656029,3.58423649917889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:154310712..154310719,- | |short_description=p@chr4:154310712..154310719,- | ||
}} | }} |
Latest revision as of 06:52, 5 August 2015
Short description: | p@chr4:154310712..154310719, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:154310712..154310719, - |
Coexpression cluster: | MCL_coexpression_mm9:178 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.45e-33 | 8 |
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
mature alpha-beta T cell | 8.84e-30 | 9 |
alpha-beta T cell | 8.84e-30 | 9 |
immature T cell | 8.84e-30 | 9 |
mature T cell | 8.84e-30 | 9 |
immature alpha-beta T cell | 8.84e-30 | 9 |
T cell | 1.34e-24 | 11 |
pro-T cell | 1.34e-24 | 11 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |