FFCP PHASE1:Mm9::chr15:54684962..54684979,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=453 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:54684962..54684979,- | |||
|description=CAGE_peak_at_chr15:54684962..54684979,- | |description=CAGE_peak_at_chr15:54684962..54684979,- | ||
|id=chr15:54684962..54684979,- | |id=chr15:54684962..54684979,- | ||
|ontology_enrichment_celltype=CL:0000680!8.25e-07!6;CL:0000183!8.25e-07!6;CL:0000187!8.25e-07!6;CL:0000056!8.25e-07!6 | |ontology_enrichment_celltype=CL:0000680!8.25e-07!6;CL:0000183!8.25e-07!6;CL:0000187!8.25e-07!6;CL:0000056!8.25e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.68e-27,3;CL:0000359,1.68e-27,3;CL:0002539,1.68e-27,3;CL:0000514,1.68e-27,3;CL:0000680,4.07e-14,6;CL:0000187,4.07e-14,6;CL:0000056,4.07e-14,6;CL:0000222,3.41e-12,7;CL:0000355,1.28e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!3.95e-07!4;UBERON:0001637!3.95e-07!4;UBERON:0003509!3.95e-07!4;UBERON:0004573!3.95e-07!4;UBERON:0004571!3.95e-07!4;UBERON:0010191!3.95e-07!4;UBERON:0004572!3.95e-07!4 | |ontology_enrichment_uberon=UBERON:0000947!3.95e-07!4;UBERON:0001637!3.95e-07!4;UBERON:0003509!3.95e-07!4;UBERON:0004573!3.95e-07!4;UBERON:0004571!3.95e-07!4;UBERON:0010191!3.95e-07!4;UBERON:0004572!3.95e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.68e-27,3;UBERON:0004237,1.68e-27,3;UBERON:0004695,1.68e-27,3;UBERON:0002111,1.68e-27,3;UBERON:0004178,1.68e-27,3;UBERON:0000947,8.04e-21,4;UBERON:0001637,8.04e-21,4;UBERON:0004573,8.04e-21,4;UBERON:0003509,8.04e-21,4;UBERON:0004571,8.04e-21,4;UBERON:0010191,8.04e-21,4;UBERON:0004572,8.04e-21,4;UBERON:0000055,8.39e-17,5;UBERON:0007500,8.39e-17,5;UBERON:0001981,8.39e-17,5;UBERON:0002049,8.39e-17,5;UBERON:0007798,8.39e-17,5;UBERON:0004537,8.39e-17,5;UBERON:0006965,8.39e-17,5;UBERON:0001044,5.62e-10,1;UBERON:0001736,5.62e-10,1;UBERON:0003293,5.62e-10,1;UBERON:0003294,5.62e-10,1;UBERON:0001829,5.62e-10,1;UBERON:0010047,5.62e-10,1;UBERON:0000167,5.62e-10,1;UBERON:0006298,5.62e-10,1;UBERON:0001134,1.28e-09,9;UBERON:0002036,1.28e-09,9;UBERON:0002385,1.28e-09,9;UBERON:0000486,1.28e-09,9;UBERON:0007503,1.28e-09,9;UBERON:0001015,1.28e-09,9;UBERON:0002329,1.28e-09,9;UBERON:0003082,1.28e-09,9;UBERON:0003059,1.28e-09,9;UBERON:0007282,1.28e-09,9;UBERON:0004290,1.28e-09,9;UBERON:0009618,1.28e-09,9;UBERON:0000383,1.03e-08,10;UBERON:0007524,5.67e-08,11;UBERON:0003077,5.67e-08,11;UBERON:0007285,5.67e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,5.27160042341476,2.0190142737785,0.782391344348039,0,0,0,0.699932108126813,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,5.11290967734173,3.89679006904303,3.18005617059306,0,1.28326477414318,0,0,0.865964164044856,1.26679932737549,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,1.27099242518292,0,0.16488625294148,0,0.361877549568935,0.835606408021955,0.984845398470368,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0.699561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,5.27160042341476,2.0190142737785,0.782391344348039,0,0,0,0.699932108126813,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,5.11290967734173,3.89679006904303,3.18005617059306,0,1.28326477414318,0,0,0.865964164044856,1.26679932737549,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0,0,0.20778804455956,0.324482526135515,0,0.622034853050465,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,1.27099242518292,0,0.16488625294148,0,0.361877549568935,0.835606408021955,0.984845398470368,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0.564751842617067,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p@chr15:54684962..54684979,- | |short_description=p@chr15:54684962..54684979,- | ||
}} | }} |
Latest revision as of 07:29, 5 August 2015
Short description: | p@chr15:54684962..54684979, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:54684962..54684979, - |
Coexpression cluster: | MCL_coexpression_mm9:453 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.68e-27 | 3 |
vascular associated smooth muscle cell | 1.68e-27 | 3 |
aortic smooth muscle cell | 1.68e-27 | 3 |
smooth muscle myoblast | 1.68e-27 | 3 |
muscle precursor cell | 4.07e-14 | 6 |
muscle cell | 4.07e-14 | 6 |
myoblast | 4.07e-14 | 6 |
mesodermal cell | 3.41e-12 | 7 |
multi-potent skeletal muscle stem cell | 1.28e-09 | 9 |