FFCP PHASE1:Mm9::chr2:62181874..62181888,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1443 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:62181874..62181888,- | |||
|description=CAGE_peak_at_chr2:62181874..62181888,- | |description=CAGE_peak_at_chr2:62181874..62181888,- | ||
|id=chr2:62181874..62181888,- | |id=chr2:62181874..62181888,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004921!1.14e-16!126;UBERON:0004185!1.14e-16!126;UBERON:0001007!5.20e-16!128;UBERON:0001555!5.20e-16!128;UBERON:0007026!5.20e-16!128;UBERON:0004119!2.25e-15!130;UBERON:0000925!2.25e-15!130;UBERON:0006595!2.25e-15!130;UBERON:0009569!8.10e-14!66;UBERON:0003104!3.92e-12!131;UBERON:0009142!3.92e-12!131;UBERON:0005911!6.11e-11!69;UBERON:0001041!1.58e-10!92;UBERON:0005172!8.39e-10!49;UBERON:0005173!8.39e-10!49;UBERON:0002417!8.39e-10!49;UBERON:0000916!8.39e-10!49;UBERON:0005177!1.07e-09!85;UBERON:0000077!1.18e-09!97;UBERON:0005057!1.44e-09!51;UBERON:0000481!3.55e-09!230;UBERON:0000065!3.73e-07!41;UBERON:0002100!6.55e-07!98;UBERON:0001004!8.67e-07!42 | |ontology_enrichment_uberon=UBERON:0004921!1.14e-16!126;UBERON:0004185!1.14e-16!126;UBERON:0001007!5.20e-16!128;UBERON:0001555!5.20e-16!128;UBERON:0007026!5.20e-16!128;UBERON:0004119!2.25e-15!130;UBERON:0000925!2.25e-15!130;UBERON:0006595!2.25e-15!130;UBERON:0009569!8.10e-14!66;UBERON:0003104!3.92e-12!131;UBERON:0009142!3.92e-12!131;UBERON:0005911!6.11e-11!69;UBERON:0001041!1.58e-10!92;UBERON:0005172!8.39e-10!49;UBERON:0005173!8.39e-10!49;UBERON:0002417!8.39e-10!49;UBERON:0000916!8.39e-10!49;UBERON:0005177!1.07e-09!85;UBERON:0000077!1.18e-09!97;UBERON:0005057!1.44e-09!51;UBERON:0000481!3.55e-09!230;UBERON:0000065!3.73e-07!41;UBERON:0002100!6.55e-07!98;UBERON:0001004!8.67e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,8.82e-10,114;UBERON:0001007,1.59e-09,116;UBERON:0001555,1.59e-09,116;UBERON:0007026,1.59e-09,116;UBERON:0004119,2.82e-09,118;UBERON:0000925,2.82e-09,118;UBERON:0006595,2.82e-09,118;UBERON:0000065,3.34e-09,41;UBERON:0001004,6.40e-09,42;UBERON:0002113,1.13e-08,14;UBERON:0003918,1.13e-08,14;UBERON:0011143,1.13e-08,14;UBERON:0005095,1.13e-08,14;UBERON:0007687,1.13e-08,14;UBERON:0002370,2.24e-08,23;UBERON:0000974,2.24e-08,23;UBERON:0004807,2.24e-08,23;UBERON:0005058,2.24e-08,23;UBERON:0003351,2.24e-08,23;UBERON:0009113,2.24e-08,23;UBERON:0003295,2.24e-08,23;UBERON:0009722,2.24e-08,23;UBERON:0005562,2.24e-08,23;UBERON:0007690,2.24e-08,23;UBERON:0006562,5.79e-08,24;UBERON:0003408,5.79e-08,24;UBERON:0001557,5.79e-08,24;UBERON:0001042,5.79e-08,24;UBERON:0008814,5.79e-08,24;UBERON:0009145,5.79e-08,24;UBERON:0005911,2.64e-07,69;UBERON:0000072,6.53e-07,27 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,1.58670339998127,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.33426826306922,0.570676878337677,1.42358718463353,0.988193728344065,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,1.29682829924817,0.995706366271836,0,0.799739588268102,0,1.22190796707189,1.16371492300575,1.61312385747733,1.20149420536089,1.18088118383682,0.941992367048249,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0,0.169745085775188,0.704070744865506,0.167506257441816,0.238043640886014,1.95133647857799,1.57635144106191,1.32878813789265,0.956728611944923,0.655453258862952,1.38147985492716,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,3.49777003955821,0.18542530201051,0.341741761595705,0,0.185194527369712,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.513554785824136,1.03936658382236,0.358053391334963,0.39736270956253,1.20195449519969,2.21534290761866,1.11063094942962,1.37172251979,1.41156659191577,1.07203668813728,1.15454209968395,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07940638327563,1.29955283489534,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0.323533699894818,0.883366073841574,0.484875253135222,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,1.0108910337347,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,1.58670339998127,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,1.33426826306922,0.570676878337677,1.42358718463353,0.988193728344065,0.251335208800269,0.198956472041151,0.38992817423824,2.69645822596266,1.29682829924817,0.995706366271836,0,0.799739588268102,0,1.22190796707189,1.16371492300575,1.61312385747733,1.20149420536089,1.18088118383682,0.941992367048249,0.123397163921801,0.592905254174298,0.166845105716094,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,4.31304619582064,0.744281895337007,0.312037673114561,0.757736633841335,0.538192240565737,0.482443521363367,0.739012760666419,0,0,0.169745085775188,0.704070744865506,0.167506257441816,0.238043640886014,1.95133647857799,1.57635144106191,1.32878813789265,0.956728611944923,0.655453258862952,1.38147985492716,0.867894351489069,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,3.49777003955821,0.18542530201051,0.341741761595705,0,0.185194527369712,0.188368457004691,0.410082683163076,0.457556346413045,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0.632022241256357,0,0.513554785824136,1.03936658382236,0.358053391334963,0.39736270956253,1.20195449519969,2.21534290761866,1.11063094942962,1.37172251979,1.41156659191577,1.07203668813728,1.15454209968395,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr2:62181874..62181888,- | |short_description=p@chr2:62181874..62181888,- | ||
}} | }} |
Latest revision as of 07:48, 5 August 2015
Short description: | p@chr2:62181874..62181888, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:62181874..62181888, - |
Coexpression cluster: | MCL_coexpression_mm9:1443 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 8.82e-10 | 114 |
digestive system | 1.59e-09 | 116 |
digestive tract | 1.59e-09 | 116 |
primitive gut | 1.59e-09 | 116 |
endoderm-derived structure | 2.82e-09 | 118 |
endoderm | 2.82e-09 | 118 |
presumptive endoderm | 2.82e-09 | 118 |
respiratory tract | 3.34e-09 | 41 |
respiratory system | 6.40e-09 | 42 |
kidney | 1.13e-08 | 14 |
kidney mesenchyme | 1.13e-08 | 14 |
upper urinary tract | 1.13e-08 | 14 |
kidney rudiment | 1.13e-08 | 14 |
kidney field | 1.13e-08 | 14 |
thymus | 2.24e-08 | 23 |
neck | 2.24e-08 | 23 |
respiratory system epithelium | 2.24e-08 | 23 |
hemolymphoid system gland | 2.24e-08 | 23 |
pharyngeal epithelium | 2.24e-08 | 23 |
thymic region | 2.24e-08 | 23 |
pharyngeal gland | 2.24e-08 | 23 |
entire pharyngeal arch endoderm | 2.24e-08 | 23 |
thymus primordium | 2.24e-08 | 23 |
early pharyngeal endoderm | 2.24e-08 | 23 |
pharynx | 5.79e-08 | 24 |
gland of gut | 5.79e-08 | 24 |
upper respiratory tract | 5.79e-08 | 24 |
chordate pharynx | 5.79e-08 | 24 |
pharyngeal arch system | 5.79e-08 | 24 |
pharyngeal region of foregut | 5.79e-08 | 24 |
endo-epithelium | 2.64e-07 | 69 |
segment of respiratory tract | 6.53e-07 | 27 |