FFCP PHASE1:Mm9::chr4:41443352..41443366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=637 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:41443352..41443366,- | |||
|description=CAGE_peak_at_chr4:41443352..41443366,- | |description=CAGE_peak_at_chr4:41443352..41443366,- | ||
|id=chr4:41443352..41443366,- | |id=chr4:41443352..41443366,- | ||
|ontology_enrichment_celltype=CL:0000055!1.59e-09!50;CL:0002319!4.14e-09!43;CL:0000221!4.18e-09!44;CL:0000133!4.18e-09!44;CL:0000117!3.96e-08!23;CL:0000337!3.96e-08!23;CL:0000393!7.27e-07!39;CL:0000211!7.27e-07!39 | |ontology_enrichment_celltype=CL:0000055!1.59e-09!50;CL:0002319!4.14e-09!43;CL:0000221!4.18e-09!44;CL:0000133!4.18e-09!44;CL:0000117!3.96e-08!23;CL:0000337!3.96e-08!23;CL:0000393!7.27e-07!39;CL:0000211!7.27e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.95e-12,3;CL:0000117,2.56e-12,23;CL:0000337,2.56e-12,23;CL:0000393,5.78e-10,39;CL:0000211,5.78e-10,39;CL:0002319,6.96e-09,43;CL:0000221,1.23e-08,44;CL:0000133,1.23e-08,44;CL:0000540,3.79e-08,33;CL:0000047,3.79e-08,33;CL:0000031,3.79e-08,33;CL:0000404,3.79e-08,33;CL:0002321,4.14e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.51e-10!75;UBERON:0001016!1.51e-10!75;UBERON:0001017!5.23e-10!73;UBERON:0005743!5.23e-10!73;UBERON:0004121!1.88e-09!102;UBERON:0000924!1.88e-09!102;UBERON:0006601!1.88e-09!102;UBERON:0002020!1.06e-08!34;UBERON:0001049!1.82e-07!52;UBERON:0005068!1.82e-07!52;UBERON:0006241!1.82e-07!52;UBERON:0007135!1.82e-07!52;UBERON:0000955!8.51e-07!50;UBERON:0006238!8.51e-07!50;UBERON:0002346!8.76e-07!71;UBERON:0003075!8.76e-07!71;UBERON:0007284!8.76e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.95e-12,3;UBERON:0002275,1.95e-12,3;UBERON:0000073,4.54e-11,54;UBERON:0001017,3.69e-10,73;UBERON:0001016,8.26e-10,75;UBERON:0002020,2.60e-09,34;UBERON:0001948,1.06e-07,5;UBERON:0002315,1.06e-07,5;UBERON:0004121,4.07e-07,95;UBERON:0000924,4.07e-07,95;UBERON:0006601,4.07e-07,95;UBERON:0001049,9.61e-07,52;UBERON:0005068,9.61e-07,52;UBERON:0006241,9.61e-07,52;UBERON:0007135,9.61e-07,52 | |||
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| ||
|short_description=p@chr4:41443352..41443366,- | |short_description=p@chr4:41443352..41443366,- | ||
}} | }} |
Latest revision as of 11:04, 5 August 2015
Short description: | p@chr4:41443352..41443366, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:41443352..41443366, - |
Coexpression cluster: | MCL_coexpression_mm9:637 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.95e-12 | 3 |
CNS neuron (sensu Vertebrata) | 2.56e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-12 | 23 |
electrically responsive cell | 5.78e-10 | 39 |
electrically active cell | 5.78e-10 | 39 |
neural cell | 6.96e-09 | 43 |
ectodermal cell | 1.23e-08 | 44 |
neurectodermal cell | 1.23e-08 | 44 |
neuron | 3.79e-08 | 33 |
neuronal stem cell | 3.79e-08 | 33 |
neuroblast | 3.79e-08 | 33 |
electrically signaling cell | 3.79e-08 | 33 |
embryonic cell | 4.14e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.95e-12 | 3 |
reticular formation | 1.95e-12 | 3 |
regional part of nervous system | 4.54e-11 | 54 |
central nervous system | 3.69e-10 | 73 |
nervous system | 8.26e-10 | 75 |
gray matter | 2.60e-09 | 34 |
regional part of spinal cord | 1.06e-07 | 5 |
gray matter of spinal cord | 1.06e-07 | 5 |
ectoderm-derived structure | 4.07e-07 | 95 |
ectoderm | 4.07e-07 | 95 |
presumptive ectoderm | 4.07e-07 | 95 |
neural tube | 9.61e-07 | 52 |
neural rod | 9.61e-07 | 52 |
future spinal cord | 9.61e-07 | 52 |
neural keel | 9.61e-07 | 52 |