FFCP PHASE1:Mm9::chr1:31006709..31006727,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=363 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:31006709..31006727,+ | |||
|description=CAGE_peak_at_chr1:31006709..31006727,+ | |description=CAGE_peak_at_chr1:31006709..31006727,+ | ||
|id=chr1:31006709..31006727,+ | |id=chr1:31006709..31006727,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.27e-16!121;CL:0000012!1.27e-16!121;CL:0002371!1.99e-15!118;CL:0000723!4.10e-15!91;CL:0000048!4.10e-15!91;CL:0000034!1.37e-14!97;CL:0000548!8.63e-14!115;CL:0000004!8.63e-14!115;CL:0000255!8.63e-14!115;CL:0000063!3.31e-09!66;CL:0000988!1.13e-07!32;CL:0002032!1.13e-07!32;CL:0000037!1.13e-07!32;CL:0000566!1.13e-07!32;CL:0000837!1.13e-07!32;CL:0002031!2.25e-07!25;CL:0002321!2.82e-07!70;CL:0000220!2.82e-07!70;CL:0002320!3.24e-07!46;CL:0000134!3.24e-07!46;CL:0000838!5.36e-07!12;CL:0000542!7.13e-07!13;CL:0000051!7.13e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.86e-14,97;CL:0000723,1.07e-13,91;CL:0000048,1.07e-13,91;CL:0000838,9.38e-10,12;CL:0002031,2.48e-09,25;CL:0000791,5.20e-09,9;CL:0000789,5.20e-09,9;CL:0002420,5.20e-09,9;CL:0002419,5.20e-09,9;CL:0000790,5.20e-09,9;CL:0000542,8.98e-09,13;CL:0000051,8.98e-09,13;CL:0000084,1.10e-08,11;CL:0000827,1.10e-08,11;CL:0000988,3.90e-08,32;CL:0002032,3.90e-08,32;CL:0000037,3.90e-08,32;CL:0000837,3.90e-08,32;CL:0000624,5.62e-08,8;CL:0000738,2.91e-07,17;CL:0002087,2.91e-07,17;CL:0002320,4.10e-07,46;CL:0000134,4.10e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.00e-10!73;UBERON:0005743!2.00e-10!73;UBERON:0000073!1.05e-09!75;UBERON:0001016!1.05e-09!75;UBERON:0002346!2.89e-08!71;UBERON:0003075!2.89e-08!71;UBERON:0007284!2.89e-08!71;UBERON:0004121!4.12e-08!102;UBERON:0000924!4.12e-08!102;UBERON:0006601!4.12e-08!102;UBERON:0000955!7.70e-08!50;UBERON:0006238!7.70e-08!50;UBERON:0000033!7.76e-08!63;UBERON:0002616!1.29e-07!49;UBERON:0002384!3.24e-07!46;UBERON:0003056!5.12e-07!49;UBERON:0001049!8.96e-07!52;UBERON:0005068!8.96e-07!52;UBERON:0006241!8.96e-07!52;UBERON:0007135!8.96e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.10e-07,46 | |||
|phase1_expression=0.320297694209588,1.39590163055744,2.27499619694768,3.0246421130683,1.00179145989269,1.34303417529512,1.16806320297763,6.97265946584512,3.23814060948833,1.63845168425395,2.91070545983358,0.797721589953364,7.01922992717943,5.15780374272085,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,2.60517423850904,3.39511721438424,4.08207792725135,0.496454756004426,1.56719873483361,0.95995453676044,0.45881856213434,1.72269589234506,0.430761996159075,1.07735616342945,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,3.69038872550742,0,0.577703239502549,0.997407872150954,1.42918549383658,5.85944283031671,3.906676722619,3.14114246384279,7.05877785637217,2.73218193983378,3.88408282424923,1.25896817975577,1.31790010585369,1.10128051297009,1.56478268869608,0.65407546914134,0.659058548203415,0.777719596297134,0.699932108126813,0,3.52343472721246,4.35217285206807,3.02484419228218,0.257259436035947,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,0.768436610643109,1.55534418462716,2.02508907497536,1.05162480675691,0.571301968807607,0.883474163806454,1.10241719293459,0.479227355091182,0.919218786610021,3.30347642998166,0.638436690425939,1.22885226604995,1.45074916503213,0.548925861614458,2.08365348222704,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0.302904773332736,0.151143120213571,3.76823835312181,0.860423876981386,0.679971333707751,0,1.29955283489534,0,0.280888840263504,0.681721290312231,0.259786004602869,0.70667914902068,1.54927761754349,0,0,0,1.08245520505607,0.506719730950197,1.01104889002957,1.02765491747154,2.58937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.485300549842228,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,1.7972268675888,1.19980546198682,0.635351135365324,1.3481157546434,0,0.753926112677186,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0.81471491080253,0.870848794270651,0.758168275301024,0.420883711772948,0,0.919608417733892,1.26043490863744,0.753524089178575,0.476255494059295,1.0249097622788,1.21812241927647,0.776110112217047,0,0.567318240503458,0.703804496655795,0.657587197282725,0,0,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.350296027101508,0.329119699826961,0.164167464079095,0.243206428637567,0.584799949701329,0,0.671032093801859,0.420579897128254,0.617427674275707,0.991256348951394,0.528901133327089,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.442655759869801,0.442830443938806,0,0.123397163921801,0.296452627087149,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0.624075346229121,1.01031551178845,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0,0.586058432961016,0.327869890753351,0,2.2085575359138,1.95219372148319,0.861693590931196,0.955875191810208,1.33679204449436,0.566153061577665,1.21443210502468,1.46127928955656,0.395287777946524,0.963963949265421,0.283880170416537,0.178065603667255,0.488660878060728,0,1.32745138339963,0.485561272309963,0.604647113929502,0.377210159511796,1.77181135728464,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,3.06395645178409,0.720244376125241,1.03486947026204,0.428674070063185,0.532020700926821,0.713475270408282,1.81003922662333,1.8267896946876,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0.741701208042039,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,1.5298058699447,1.11961161858926,1.24379976423981,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,4.50954350947352,0.299033092087958,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0.629156066554265,4.34851417486811,10.9451402377989,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.480781798079875,0,0.302899349844443,0.304827226619999,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0.269141569828427,0,0.772758376128762,0,0.36630324853453,0,0,0.564751842617067,0.920650473014354,1.718686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| |phase1_expression=0.320297694209588,1.39590163055744,2.27499619694768,3.0246421130683,1.00179145989269,1.34303417529512,1.16806320297763,6.97265946584512,3.23814060948833,1.63845168425395,2.91070545983358,0.797721589953364,7.01922992717943,5.15780374272085,0.333109761815663,1.01237633694913,0.699561878128147,1.73504190947031,2.60517423850904,3.39511721438424,4.08207792725135,0.496454756004426,1.56719873483361,0.95995453676044,0.45881856213434,1.72269589234506,0.430761996159075,1.07735616342945,0.380046838912748,0.252030129759931,0.221730510655305,0.635030673459631,3.69038872550742,0,0.577703239502549,0.997407872150954,1.42918549383658,5.85944283031671,3.906676722619,3.14114246384279,7.05877785637217,2.73218193983378,3.88408282424923,1.25896817975577,1.31790010585369,1.10128051297009,1.56478268869608,0.65407546914134,0.659058548203415,0.777719596297134,0.699932108126813,0,3.52343472721246,4.35217285206807,3.02484419228218,0.257259436035947,0,0,0.809265843438391,1.5869729378161,1.26766280701236,0.677689064138264,0,0.449949858640699,1.97773272513395,1.4209602298922,0.898800331555214,0.768436610643109,1.55534418462716,2.02508907497536,1.05162480675691,0.571301968807607,0.883474163806454,1.10241719293459,0.479227355091182,0.919218786610021,3.30347642998166,0.638436690425939,1.22885226604995,1.45074916503213,0.548925861614458,2.08365348222704,0.558365998002762,0.56276261003168,1.22238598221448,0.294628585473668,0.711858403995515,0.372798891650601,0.302904773332736,0.151143120213571,3.76823835312181,0.860423876981386,0.679971333707751,0,1.29955283489534,0,0.280888840263504,0.681721290312231,0.259786004602869,0.70667914902068,1.54927761754349,0,0,0,1.08245520505607,0.506719730950197,1.01104889002957,1.02765491747154,2.58937883647172,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.753613202763113,0.470354828542819,0.376999773989026,0,0.433798070759735,0,0.485300549842228,0,0,1.86391761218122,0.878342391034642,1.04723353406728,0,1.7972268675888,1.19980546198682,0.635351135365324,1.3481157546434,0,0.753926112677186,0.869121600961382,1.02286182932132,0.62336413367868,0.648965052271031,0.81471491080253,0.870848794270651,0.758168275301024,0.420883711772948,0,0.919608417733892,1.26043490863744,0.753524089178575,0.476255494059295,1.0249097622788,1.21812241927647,0.776110112217047,0,0.567318240503458,0.703804496655795,0.657587197282725,0,0,0.205782136407943,0.59710280045548,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0,0.465067889500816,0,0.350296027101508,0.329119699826961,0.164167464079095,0.243206428637567,0.584799949701329,0,0.671032093801859,0.420579897128254,0.617427674275707,0.991256348951394,0.528901133327089,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0.380451252225118,0,0.329397909448022,0.502670417600539,0,0,0,0.216138049874694,0,0.758671603812327,0.456994050438915,0,0.203651327845314,0.193952487167626,0.140271639780637,0.442655759869801,0.442830443938806,0,0.123397163921801,0.296452627087149,0.667380422864376,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0.624075346229121,1.01031551178845,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.169745085775188,0.469380496577004,0.502518772325447,0,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0.578596234326046,1.50791283939272,0,0,0,0,0.586058432961016,0.327869890753351,0,2.2085575359138,1.95219372148319,0.861693590931196,0.955875191810208,1.33679204449436,0.566153061577665,1.21443210502468,1.46127928955656,0.395287777946524,0.963963949265421,0.283880170416537,0.178065603667255,0.488660878060728,0,1.32745138339963,0.485561272309963,0.604647113929502,0.377210159511796,1.77181135728464,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,3.06395645178409,0.720244376125241,1.03486947026204,0.428674070063185,0.532020700926821,0.713475270408282,1.81003922662333,1.8267896946876,0,0,0.441056796109924,0.49465875882444,0.484393280087717,0.603129249281559,0.238744688006273,0.164140899745061,0.582961673259701,0.741701208042039,0,0.412773735926445,0.370389054739423,0.188368457004691,0,0.228778173206523,1.5298058699447,1.11961161858926,1.24379976423981,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0,0,0,4.50954350947352,0.299033092087958,0.165458490457098,0.388902376688095,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0.629156066554265,4.34851417486811,10.9451402377989,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.39736270956253,0.480781798079875,0,0.302899349844443,0.304827226619999,0.302478555410522,0.0974578807397524,0,0.116876902181569,0.453460767230423,0,0.269141569828427,0,0.772758376128762,0,0.36630324853453,0,0,0.564751842617067,0.920650473014354,1.718686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| ||
|short_description=p@chr1:31006709..31006727,+ | |short_description=p@chr1:31006709..31006727,+ | ||
}} | }} |
Latest revision as of 13:49, 5 August 2015
Short description: | p@chr1:31006709..31006727, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:31006709..31006727, + |
Coexpression cluster: | MCL_coexpression_mm9:363 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.86e-14 | 97 |
somatic stem cell | 1.07e-13 | 91 |
multi fate stem cell | 1.07e-13 | 91 |
lymphoid lineage restricted progenitor cell | 9.38e-10 | 12 |
hematopoietic lineage restricted progenitor cell | 2.48e-09 | 25 |
mature alpha-beta T cell | 5.20e-09 | 9 |
alpha-beta T cell | 5.20e-09 | 9 |
immature T cell | 5.20e-09 | 9 |
mature T cell | 5.20e-09 | 9 |
immature alpha-beta T cell | 5.20e-09 | 9 |
lymphocyte | 8.98e-09 | 13 |
common lymphoid progenitor | 8.98e-09 | 13 |
T cell | 1.10e-08 | 11 |
pro-T cell | 1.10e-08 | 11 |
hematopoietic cell | 3.90e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.90e-08 | 32 |
hematopoietic stem cell | 3.90e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.90e-08 | 32 |
CD4-positive, alpha-beta T cell | 5.62e-08 | 8 |
leukocyte | 2.91e-07 | 17 |
nongranular leukocyte | 2.91e-07 | 17 |
connective tissue cell | 4.10e-07 | 46 |
mesenchymal cell | 4.10e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.10e-07 | 46 |